Labrus mixtus (cuckoo wrasse): 132972472
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Entry
132972472 CDS
T10666
Symbol
blm
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03440
Homologous recombination
lmix03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132972472 (blm)
03460 Fanconi anemia pathway
132972472 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmix03032
]
132972472 (blm)
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132972472 (blm)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
132972472 (blm)
DNA replication proteins [BR:
lmix03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132972472 (blm)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
132972472 (blm)
Bloom's syndrome complex (BTR)
132972472 (blm)
FA (Fanconi anemia) pathway
132972472 (blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
Katanin_con80
Motif
Other DBs
NCBI-GeneID:
132972472
NCBI-ProteinID:
XP_060891312
LinkDB
All DBs
Position
4:5503137..5514755
Genome browser
AA seq
1397 aa
AA seq
DB search
MTSLPQNNLKEQLARHSNAAQSKLSLAKPKTGAFSFKKKTSSGTTKVEIPTKVISTNPLA
NRNVNVPNSLVTKSTSTFSNKLDGSQTSKINNFFPASSKAKSDSINSSGLCAPASQAPSI
VSTITKSKNQLISGTRGNTSSGNASLGFGIEDWDDFDDFETPNKAKNDSFSPGTSGKSNN
PLPFLREEKSKFTVDLDSCAEKNGLSRREKSGFETDDHKHSVDKASLSPGPNLNKDPDEF
EPQDSPIKMTRRHLPAPLTSVFSDSEEDNDVVTEPSKVTDEKKNWIDPMVIELNDNSESE
DELDYIPPSPIPDDNSFSSFTPKTRSKSADVQSRDSLAHLKRPLTTRNEPTDQRSKDKTN
DQLFSIMESICALVDSIPEHELIGLACGNELLLKRAQRKRILAIGGDSFLRMQQPDSTVV
SEPRFKDKYFMSSSSFAPVDSKKPPQIGRSSLMSVDYDSDNSVSIINVKPVKSADSRVMY
VDNESICDSPSTHSFTNPYFNLAEKTGTDLDGSDLFFSPKKPETVIQSKRNAPATITAAE
DLEPDDFYNDDFDIDDFNDSDIPEYFEKPETLTSTIKEGGPSKSSFESKSTTPKSAPKPS
KMCSPEPTYRNPAHDRFRGFNFPYSQEMMKIFHKRFGLHQFRFNQLEAINASLQGEDTFV
LMPTGGGKSLCYQLPACLSQGVTVVISPLKSLIVDQVQKLTTLDIPAISLSGGKSDSEAS
RIYLQLSRKDPIIKLLYVTPEKVSASNKLISALQNLFERGLLARFVIDEAHCVSQWGHDF
RPDYKRLHELRQKFPSVPMMALTATATPRVQKDILNQLNMTRPQVFTMSFNRTNLKYSVL
PKKPKKVDEDCITWIKKHYPRDSGIVYCLSRKDCDAMAESLQRARILALSYHAGLSDGDR
EYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEIS
HCILFYSYADVHRIKRIISMDREGDRHAKSTHFDNLHSMVHFCENLMECRRIQLLAYFGE
LKFNKGFCKEHPDVTCDNCCKPTQYKLRNVTEDVKKIARFVQDNCEKVGSRFGKTAQKNR
LTLNMLVDIFIGSKSAKVQTGMFGMGGAYSRHNADRLFKKLVLDKLLEEDLYITNGGQAV
SYISAGQKAMNVISGNMQVEFYETESASSIRKHKASVAQNVSQRDEKVQECLKELTDLCK
QLGKAFSIHYYNIFSTATVKKIAEKLSSDPDVLLTIDGVTEDKLEKYGAEVIQVLQKYAE
WQLPAEEPADNDGDGWIDTTRGRAAVDYDDDDTESSSYFHNQAQQGQKRKKAPFFKYSKK
KKSYGNTSTNSKGRGYSSNKSWSSSSTRGGSKAAGRGSRSSAGDASASTGRRPGILSLPT
PQSNQRPFLKPSFSHLG
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtcttccacaaaataacttgaaagaacagctggcaagacacagcaatgctgct
caaagcaagctgtctctcgctaaaccaaagacgggggccttttcttttaaaaagaagacc
tcgtcaggtaccaccaaagttgaaatcccaaccaaggtaatcagcactaatcctttggca
aacaggaatgtcaatgtccctaacagtttggtgactaaatctacttcgacattttctaac
aagcttgacggatctcaaacgtccaaaatcaacaacttcttccctgcaagctccaaagcc
aagtcagactccatcaactcatccggactctgtgcacctgcaagccaggcaccttcaata
gtgtccactattactaaatctaaaaaccagttaattagtggcacacgaggcaatacctca
agtggaaatgcatctcttggatttggaatagaggactgggatgattttgatgactttgaa
actccaaacaaagcaaaaaatgactcattcagcccaggaacgtcaggaaagagcaataat
ccattgccatttcttcgtgaagaaaaaagcaaattcacagtggatctggacagttgtgca
gagaagaatggcctttccagaagggaaaaatctggttttgaaacggatgaccataagcac
agtgtcgacaaagcttcactttcaccaggacctaatttgaataaggacccagatgagttt
gaacctcaggattctcccattaaaatgacccggagacatcttcctgctcctctcacgtct
gtcttcagtgatagtgaagaggacaatgatgttgtgacagagccttctaaagttacagac
gagaagaaaaactggattgacccgatggtaatagagctcaatgacaactcggaatcagaa
gatgaacttgattacattcccccatctccgatcccggatgacaattctttctcttctttt
acacctaagacaaggtctaaatcagctgatgtgcaaagcagagacagtcttgcgcacttg
aaaagacccctgacaacccgtaatgaacccactgatcaacgatcaaaagacaaaacaaac
gatcaactcttcagtatcatggagtccatctgtgctttggttgattcaatccccgaacat
gaacttataggtctcgcttgtggaaatgagcttctgttgaaacgggctcaaaggaagagg
attcttgcaattggcggggacagttttttaaggatgcagcagccagacagcactgtggtt
tctgaacccagatttaaagacaaatattttatgtcctccagcagttttgcacctgtggat
tccaagaagcctcctcagatcgggaggtcttcattaatgtctgtggactacgactctgat
aattctgtcagtattataaatgtaaaacctgtgaagagtgctgacagcagggtaatgtat
gtcgacaatgagagtatctgtgactctccgtcaacccacagcttcacaaatccgtatttt
aatctcgctgagaaaacgggaacagatttggacggttcagatctctttttctcacccaag
aagccggagactgtcattcagagcaaacgtaatgccccggcaaccattacagcagcggaa
gacctcgagccagatgacttttacaatgatgactttgacatagacgattttaatgactcg
gatatccctgaatattttgaaaaacccgaaaccttgacgtcaaccataaaagagggggga
ccaagcaagtcttcctttgagagtaaatctactacacctaaatctgcacccaagccttca
aagatgtgctccccggaaccaacctacagaaatccggctcacgatcgcttcaggggtttt
aacttcccctactcacaagaaatgatgaagatctttcacaagcgttttggtcttcatcaa
ttcaggttcaatcaactagaagcaattaatgcgtcacttcagggagaagacacgtttgtg
ctgatgcccacaggtggtggtaagagtctgtgctaccagctgcctgcctgcctgtcacag
ggagtcactgtggtcatctccccactcaaatcactcatagtagaccaggtccagaaactc
acaacactggatatcccagcaataagtctgtctggtggtaaaagtgacagtgaagcaagc
aggatctacttgcagctctccaggaaagacccaatcattaaactgctctatgtcactcct
gaaaaggtaagtgcaagtaacaagctgatctcggccctgcagaatctcttcgagcgaggc
ctactagcccggtttgtcatcgatgaggcccattgtgtcagtcagtggggccatgatttc
cgaccggactacaagaggttgcacgaactgcgtcagaagttccccagcgtgcccatgatg
gctctgacagccaccgccacccctcgagttcagaaagacatcctgaaccagctgaacatg
acccgaccgcaggtgttcaccatgagtttcaacagaacaaacctgaagtactccgtgctg
cccaagaaaccaaagaaggtagacgaggactgcatcacttggatcaagaaacactatcca
cgcgactccggcattgtgtactgcctgtcccgtaaggactgtgatgctatggccgagagt
ctgcagcgagctcggatattagctttgtcgtatcacgcaggcctgagcgacggtgacaga
gagtacgtgcagagcaagtggatcaatcaggacggctgccaggtcatctgtgccaccata
gcgtttggtatgggcattgataagcctgacgtgcgctatgtgatccatgctagtctgcct
aagtcagtggagggttactatcaggagtctggacgagctggcagagatggagagatctct
cactgtattctcttctactcatacgcggacgtccatcgcatcaagaggattatcagcatg
gacagagagggtgaccgacacgccaagtcaacccactttgacaacctacacagcatggtg
cacttctgtgagaacttgatggagtgcagaagaattcagctgctcgcgtactttggggag
ctgaaatttaacaaaggtttctgtaaggagcacccggacgtcacgtgtgacaactgctgc
aaacccacccaatacaagctgagaaatgtgaccgaggacgtgaagaagattgcaaggttt
gtccaggacaactgtgagaaagttggatcgaggtttggcaagacggctcagaaaaaccga
ctgaccctgaatatgttggtggatatcttcataggatctaaatctgctaaggtacagact
ggaatgtttgggatgggaggagcttactccaggcataacgctgaccgtctcttcaaaaaa
ctggttctggacaaactcctggaggaggatctctacatcaccaatggtggccaagctgtt
tcttatatctctgctggacaaaaagccatgaatgtcatttctggaaacatgcaggtggag
ttctatgagacggagagcgcatccagcatcaggaaacataaagcctctgttgcccagaac
gtgtcacagagagatgagaaggttcaggagtgtctgaaagagctgacggatctgtgcaag
cagctgggcaaagctttcagcatccactattacaacatcttctccactgcgactgtaaaa
aagatagccgagaaactttcttctgatcctgacgtcctcctaactattgacggtgtgaca
gaagacaaacttgaaaagtatggagctgaagtcattcaggtcctacagaaatatgcggag
tggcagctgcctgcagaggaaccggcggacaatgacggagacgggtggatagacacaaca
cggggccgcgctgctgtagattatgatgacgacgacacagagtcctccagctacttccat
aatcaggcccaacagggacaaaagaggaagaaagcccccttcttcaaatattcaaagaag
aaaaaatcatatggcaacacgagcactaactctaaaggtcgtggctacagcagcaataaa
tcctggtcatcatccagcaccagaggtggatcaaaagctgcaggccggggctccaggagc
tcagcgggagatgcatcagcatcaacaggcaggagaccgggcatcctgtctctcccgacc
cctcagtccaaccagagacccttcttgaaaccaagcttctcacacttgggctag
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integrated database retrieval system
