Labrus mixtus (cuckoo wrasse): 132972494
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Entry
132972494 CDS
T10666
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132972494 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lmix03310
]
132972494 (roraa)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132972494 (roraa)
Nuclear receptors [BR:
lmix03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132972494 (roraa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132972494
NCBI-ProteinID:
XP_060891365
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Position
4:5935329..6126905
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AA seq
519 aa
AA seq
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MDSPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggactcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagactctccggaaagcggaccatccagccccg
gttcgaaggcagacctgttcgagcaccaacagaggtatctcagtaacaaagaagacacat
acctctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcgtactcatgcccccgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtccagagatgcggtgaag
ttcggccgcatgtcaaagaagcagcgggacagcctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcagcgcgaccaccaacaacagccgggtgaggcggagccactcacaccc
agctatggcctctcagccaatggcctcacggagctccatgacgacctcagcggctacatg
gacggtcacacccccgacggcagcaaaccagactcggcggtcagcagcttctatctagac
atccagccatctcctgaccagtcaggcctggacatcaacggcatcaaaccagagcccatc
tgcgactttgcccctggctctggcttcttcccttactgctccttcaccaacggagaaacc
tcccccaccgtgtccatggctgaactagagcatctggcccagaacatctctaagtcacac
atggagacatgtcagtacctgagggaggagttacagcagatgacctggcaggccttcctg
caggaggaggtggagagctaccagaacaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttc
atggagctctgtcagaatgatcagatagtgctgctgaaagcaggctctttggaagtcgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatggaaag
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtctgctgaccggtcttggctccaggagaaggtgaaggtggaaaaa
ctccagcagaagatccagctggctctccagcatgtcttgcagaagaaccacagagaggat
ggtatacttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagctcacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatacaaggagctgttcggatcagactttgagcagtccatgcccgttgacgggtag
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