Labrus mixtus (cuckoo wrasse): 132972534
Help
Entry
132972534 CDS
T10666
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132972534 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132972534 (arih1)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
132972534 (arih1)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
132972534 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_14
zf-RING_5
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
132972534
NCBI-ProteinID:
XP_060891423
LinkDB
All DBs
Position
4:6660277..6673319
Genome browser
AA seq
530 aa
AA seq
DB search
MDSDEGYNYEYDDEEEECSEDSAEEEPEDDTLELGEVELVDPVVAGGERDECGETGGGGH
GPGEEEEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERY
FDGNLDKLFSECHVINPSKKPRIRPPINTRSSAQDMPCQICYLNFPNSYFTGLECGHKFC
MQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE
CNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCD
DDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYN
CNRYNEDDAKAARDAQEQRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQ
HNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSG
YLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgagggttataactatgaatacgacgacgaagaagaggaatgtagcgag
gacagcgccgaagaggagcccgaggacgacaccctggagctcggggaggtggagttggtc
gatcccgtggtggccggtggggagcgagacgagtgcggcgaaactggcggaggtggccac
ggccccggcgaggaagaggaggaggactaccgcttcgaggttttgaccgccgagcagatc
ctccagcatatggtggagtgtatcagggaggtcaacgaggtcatccagaatcctgcaaca
ataacgcgtatccttctcagtcacttcaactgggataaagaaaaactaatggaaaggtat
tttgatggcaatcttgacaagcttttctccgagtgtcatgtaattaaccccagtaagaag
cctcgcatccgtcctccaatcaacactagatcgtcggcacaggacatgccatgtcagatc
tgctatctgaacttcccgaactcctattttacaggcctggagtgtggacacaagttctgc
atgcagtgctggggagattacctgaccaccaaaatcattgaagaaggaatgggacagacc
atttcgtgtcctgctcatagttgtgacattttggtcgatgacaacacagtcatgcgcctc
ataacagattcaaaagtaaagttgaagtaccagcatttaataacgaatagttttgtagag
tgcaatcgactgttaaagtggtgcccggcaccagactgccatcatgttgtcaaagtccag
tatccagatgccaagccagtgcggtgcaagtgtggacgtcagttctgcttcaactgtgga
gagaattggcatgatcctgtcaagtgtaagtggctgaggaaatggattaagaaatgtgat
gatgacagtgaaacttcaaactggattgcagcaaatacaaaggagtgtcctaaatgccat
gtgaccattgaaaaagatggaggctgcaatcacatggtttgtcggaaccagaactgcaaa
gccgagttctgctgggtctgcctgggtccatgggaaccccacggctcagcttggtacaac
tgcaatcgctacaatgaagatgatgccaaggcagccagagatgctcaagagcagcgctcc
agggcagccttgcagaggtacctattctactgcaaccgctacatgaaccacatgcagagt
ctgcgctttgagcacaagctctacgctcaggtcaagcagaagatggaggagatgcagcag
cacaacatgtcctggattgaggtgcagtttctgaagaaggctgtggatgtgctgtgccag
tgtcgctccacactcatgttcacttacgtctttgccttctacctcaagaagaacaaccag
tccattatttttgagaacaaccaggcagacctggaaaatgccacggaggtgctctctggc
tacttagagcgggacatctcccaggattccttgcaggacatcaagcagaaagtacaagac
aagtacagatactgtgagagcaggcgaagagtgctgctacagcacgtgcatgaaggctat
gagaaggacctgtgggagtacattgaggattga
DBGET
integrated database retrieval system
