Labrus mixtus (cuckoo wrasse): 132972564
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Entry
132972564 CDS
T10666
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmix03009
]
132972564 (ighmbp2)
03012 Translation factors [BR:
lmix03012
]
132972564 (ighmbp2)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132972564 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
132972564 (ighmbp2)
Ribosome biogenesis [BR:
lmix03009
]
Eukaryotic type
Other ribosome biogenesis factors
132972564 (ighmbp2)
Translation factors [BR:
lmix03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132972564 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
Helicase_RecD
ResIII
nSTAND3
AAA_16
AAA_22
SLFN-g3_helicase
UvrD-helicase
IstB_IS21
ATPase
Flavi_DEAD
ABC_tran
DnaB_C
AAA_25
PhoH
NPHP3_N
AAA
AAA_31
HEM4
SRP54
Zot
AAA_28
Motif
Other DBs
NCBI-GeneID:
132972564
NCBI-ProteinID:
XP_060891467
LinkDB
All DBs
Position
4:complement(7230185..7237986)
Genome browser
AA seq
985 aa
AA seq
DB search
MAVEQFVSKTLELLQEEREAEIEETRIWQENISLKDLQSKGVCLLKLQIGSQFTGLYGRT
VIVLEPRKHLGFSTLPSNSFGPGDIVGLYDTGGCTAASQISTGVVTRVSQASLSVAFDDT
QDGGSFEDNALYNLLKLANDVTYKRMKQALNTLNGYSNGPAGNLINVLFGDTTPSQSQPN
EVEFINSNLDDSQRGAVSFALSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCAP
SNVAVDNLVERLARCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIADIRKDMDKA
FMGMKKMREKADRGNFRREIKELKKELKTREATAITQILKSADVVLSTNTGACDDGPLKF
LPAEHFDWVVIDECAQALESSCWIALLRARKCILAGDYKQLPPTIKSQKAASKGLSLSLM
ERLIQMCGDSVVRMLTVQYRMNSAIMEWASKEMYQGRLTAHSSVEGHLLKDLPGVACVEE
TSTPLLLVDTAGCGLSEMEVTDEQSKGNQGEVDIVDLHIKTLIEAGLKAKDIAVIAPYNL
QVDLLRQRLSARHPELEIKSVDGFQGREKEAVVLSLVRSNRKGDVGFLAEDRRINVAVTR
ARRHITVVCDTQTVQNHPFLKSLILHMTEFGTVRTAFEYIQDIVPQNYTRDQKDIKPNTS
SSNSATTKQKVKQPPPNKMKPGQKTSSDDKSTGTKRHTTSCLSAHEEEQKKQNRQIEIRQ
QVEKFLKDLNQSELQFPSSFNSHDRLLVHQIAEELGLVHESKGEGKDRCITLSRRPESSP
SELQLQEAEVAHEEEPPLPNTSSETLRQPLLDLKSLHLERMKREQQKREENAQQKKQQSI
PLPAQSSKKPKSAKGKNRTKAGACDIAAAAAPDEDFDALINAVRKAESVCSFVKCKASVL
TLGQLCMFCNRQFCLSHHIPEVHGCGDKAKSHARMRISKEGVLYAGSGKKDKSMDPNKKA
YLQRKLDSKLKDMASQRKPKNNEES
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgaacaatttgtgtcaaaaacacttgagcttctacaagaggagagggaggct
gaaatagaagaaaccaggatatggcaggagaacatctctctcaaggatcttcaaagtaaa
ggagtttgcctgctgaagctgcagataggaagtcagttcacgggcctctatggtcgcaca
gtcatcgtcctcgagccaaggaagcatcttgggttctcaactctgccaagcaacagcttt
gggcctggagatatagtcggcttgtatgacactggcggatgcactgcagcctcgcaaatc
agcacaggagtagtgacaagggtcagccaggcttctttaagtgtggcctttgatgatacg
caggacggcggcagctttgaagacaacgctctttacaatctcttaaagttggcaaacgac
gtcacatacaaacgaatgaaacaggccctgaatacattaaatggatacagtaatggacca
gctggcaatctgatcaatgttctgtttggagacacaacaccttctcaatcacagccaaat
gaagttgagttcataaactccaacctggatgattcccagagaggcgctgtgtccttcgct
ctgtctcagagagagctggctgtgattcatggaccacctggcacgggcaaaaccaccaca
gtggtggaaataatcctgcaagcagtcaaacaaggccaaaaggtcctgtgctgtgccccc
tctaacgtggctgtggataacttagtggaaaggttagctcggtgcaaagcaaaagtcctg
aggctgggtcaccctgccaggctgctggagtccatacagaaacattcccttgacgccatc
cttgctcagagtgacaatgcaaacatcattgcagacatccgtaaagacatggataaagct
tttatgggaatgaagaagatgcgtgaaaaagcagaccgagggaacttcagaagggaaata
aaggagctaaaaaaagaactgaagaccagggaagcaacagccatcactcagatccttaaa
agtgctgatgtcgtcttatcaacaaatacgggtgcttgtgatgacggccctctgaagttc
ctgccggcggagcattttgattgggtggtgatagacgagtgcgctcaggccctggagagc
agctgctggatcgctctgctcagagcacgcaagtgcattctggccggagactacaagcag
ctaccgcctacaatcaaatcacaaaaggctgcatcaaaaggcctgtccctcagcctcatg
gaaagactaatccagatgtgcggggactccgtggtgcgtatgctaacagttcagtaccgc
atgaacagcgccatcatggagtgggcctccaaagagatgtaccagggaagactgaccgct
cacagctctgtagagggacatttgttaaaagatctaccaggagtcgcctgtgttgaagag
accagcacgccgctgcttcttgtcgacaccgcaggctgcggtctgagtgagatggaggtc
acagatgaacagtccaaaggcaatcaaggtgaggtggatatagttgatctgcacattaag
accttgattgaagctgggttaaaagccaaagacatagctgttattgctccgtacaatcta
caagtggatcttctgcgtcagagactttctgctagacatccagagctggagatcaagtca
gtggacggatttcagggcagagagaaggaggctgtggtgttgtcgttagttcgatccaac
agaaaaggggatgttggatttctggccgaggacagaaggataaatgttgctgtaacacgt
gccagacgtcacattactgtggtctgcgacacccaaactgtccagaatcatcctttcctg
aagtccctcattcttcacatgactgagttcggcacggtcagaacggcatttgagtacatc
caggacatcgtgccacaaaactacacccgcgaccagaaggacatcaagcccaatacatct
tccagcaactctgcgaccaccaaacagaaggtcaaacagccgcctcccaacaagatgaaa
ccaggacagaagacatctagtgatgataaaagtaccggtacgaagaggcacacaacatcc
tgtctatctgcacatgaggaggagcagaagaagcagaacagacaaatagagatcagacag
caggtggagaagtttctcaaggacttaaatcaaagtgaactccagtttccatcatcgttc
aactctcatgaccgcctgctggtccatcagatcgctgaggagctgggactggtgcacgag
agtaaaggtgaggggaaggaccggtgtatcactctgtccaggcgcccggagtcatcacct
tctgagctgcaactacaagaagcagaagtagcccacgaagaagaaccaccactcccaaat
accagtagcgagacacttcgtcaacctctgctggacctgaaaagtttacatttggagcgg
atgaagagggagcagcagaaaagggaagaaaatgctcaacaaaaaaagcaacagagcatt
cctctaccagctcagtcatcaaagaaaccaaaatcagctaaaggaaagaaccgcacgaag
gcaggcgcctgcgacatcgccgccgctgctgctccagatgaggactttgatgcgcttatc
aatgctgtcaggaaggctgaaagtgtatgcagtttcgtcaaatgtaaagcttcggtgtta
acactcggacagctttgcatgttctgcaacaggcagttctgtctgagtcatcatatacca
gaggttcacggctgtggagataaagccaagtcccatgctcggatgagaataagtaaagaa
ggtgttctttatgcagggagtgggaagaaagacaaatcaatggaccctaataagaaagcc
tatctgcaaaggaaactggactccaaactgaaagatatggcatcacagagaaaaccaaaa
aacaacgaggagagttaa
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