Labrus mixtus (cuckoo wrasse): 132972591
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Entry
132972591 CDS
T10666
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
132972591 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132972591 (myo5c)
04131 Membrane trafficking [BR:
lmix04131
]
132972591 (myo5c)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132972591 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmix04812
]
132972591 (myo5c)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
132972591 (myo5c)
mRNA cycle factors
P-body specific factors
132972591 (myo5c)
Membrane trafficking [BR:
lmix04131
]
Others
Actin-binding proteins
Myosins
132972591 (myo5c)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
132972591 (myo5c)
Cytoskeleton proteins [BR:
lmix04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
132972591 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Crescentin
Csm1_N
AAA_22
YqgF
AAA_16
Myosin_N
Ac76
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
132972591
NCBI-ProteinID:
XP_060891512
LinkDB
All DBs
Position
4:complement(7932574..7944808)
Genome browser
AA seq
1743 aa
AA seq
DB search
MMAVFELYTQYNRVWIPDAEHVWKSAEISRDFHFGENALELLLEDGKEYNHPVDPSKPQL
PPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHVY
GDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRY
FAVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKKFRIIGANM
RTYLLEKSRVVFQADDERNYHIFYQMCSCAHLPEFKNLRLLSADKFQYTCMGGEMTIEGV
DDKKDMEETQRTFSLLGLKEEFQSDVFKVLAAILHLGNVEIKDSGSDKSSVPLSDPHLAV
FCELLGVSAEGLVRWLCHRRIVLVAETVVKPVPKEKAVNARNALAKQIYAHLFDCIINRI
NTALQVPGKQHAFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMR
EDIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLADNPLFEK
PRLSNEAFTIQHFADKVEYQCRGFLEKNRDTLYEELVDILRASKFPFLANFFKEEELRAV
NGKGVKVRPARPGVKAASKQLRASVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPF
EYDSRRVVQQLRACGVLETIRISAQSYPSRWTYNEFYSRYSILMLHQEADLSDKKQTCKN
VLQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKYLRM
REAAVILQQYIRGQRTIRKTVSAATLKQGWASLVIQKHWKGYRMRQIYIVVRVASITIQA
FTRGWKARKQFKTMMKEHKALVLQKYARAWLARRRFQTMRRLVLNVQLSYRVQQLRKKIE
EQSKENCGLVERLTTLANSHSQTVEKLQGLEVKLEKSTHLKASVEAREKKAKEDAGLTIA
LLQKDMDALNLEKQNLEKKFEASFKEAKENFDHIKSSLLEEKEYEARLRKIAESNTEIQR
QDHEKEVEILKEEIKRLKDERVGLQGKMEEAGQVNADLQEQVIQLTKHVKTIPELRRDLN
NLQNQRINMDRKMKQQSEQARVKVNDITRQLLGGVVEEEVLLGLSPDDSEKIYEVEDMLA
AFDGLQKASRILESHQKEQKEKYESQVEGLKLKVDHLDNENSKLQNLFQEKSNVNENIRQ
EVSRLSSENSVIPELKLQASDLQRQKQELEAHVEEQRKELAEKTEEITNVLQRKIEDESS
QRRHLEEKAGELEEQKNELQEQLEELEEETDHLKRQQLMESEAKSKLRQDISRLTAENMD
FEEMLDHKDRLIKKLRSQIKSLETSQRVKQTSAPAIPKDFLGMLEYKLEDGPRLIQNIIL
DLKPKGVAVNMMPRLPAFILFMCIRHVDYLNDEDKLKSLMNEMIAAVKKVILSYHKDFEV
LSFWLSNTYQLLNCLKQYSGEEEFMKQSTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQF
LSVMEKSLTPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETYTISSIIQQFSTFL
SIMSQHDMEQGLIRQAVKQLFFLVGAITLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKE
KGLQGSNAMDTLRPLSQAAWLLQVNKSTDDDAKELAEKCTELNTVQIVKILNSYTPIDDF
EKRVSSSFVRKVQSLLHDRESSSQLMLDSDYRFQVTFPFCPSLQALELLQVPSSLHLDFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgtttgagctgtacacccagtacaacagagtgtggatcccagatgctgag
catgtgtggaaatcagctgagatcagcagagactttcactttggggagaatgctcttgaa
ttgctccttgaagatggcaaagagtacaaccaccccgttgacccgtctaaacctcagctc
cctcctcttcgtaacccggacatcttggtgggggagaacgacctcacagctctcagctac
ctgcatgaacctgcagtccttcacaatctgaaagtgcgatttgtggagtccagaatcatc
tacacctactgtggtatcatcctggtggctgtaaatccatacaagcagcttcatgtctac
ggcgacgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatata
tttgcagtggcagaggaggcttacaagcagatggccagaaaccacaagaaccagtccatc
atcgtcagcggggagtctggcgccgggaagacagtgtccgctcgatacgctatgcggtac
tttgctgttgtaagcaaatctggaagtaaaactcgagttgaagacaaagtcctggcatcc
aatccaataacagaggcaattggaaacgcaaagaccacccggaacgacaacagcagccgt
tttgggaaatacacagagatcagctttgacaagaagttcaggatcatcggggccaacatg
aggacgtatctcttagagaaatccagagttgtgtttcaggcagacgacgagcggaactat
cacatattctatcagatgtgctcctgtgctcacctgccagagttcaagaacctgaggctg
ttgagtgcagataagttccagtacacctgcatgggcggcgagatgactattgaaggggta
gatgacaagaaagacatggaggagactcaacggaccttctccctcctagggttgaaggaa
gagtttcagtcagatgttttcaaagttttggcagctattctacatctgggaaatgtggaa
atcaaggactctggaagtgacaaatcctcagttccactcagcgatccacacctggcggtc
ttctgtgagttgctgggtgtgagcgcagaggggttggtgcgctggctctgccaccggagg
atcgtgctggtggctgagacggtggtgaagccggtgcccaaagagaaagcggtgaatgcc
aggaatgctttagccaagcagatctacgcccatctgttcgactgtatcatcaacaggata
aacacagcgttgcaggttccaggaaaacagcacgctttcattggtgttctggacatttat
ggctttgaaacgtttgacgtcaacagctttgaacagttttgtatcaactatgcaaatgaa
aaacttcaacagcagttcaatttgcatgtgtttaaactggagcaagaggagtacatgcga
gaggacatcccctggacactgatagatttctatgacaaccagccagtcattgatctgatt
gaagcaaagatggggatcctggacttgcttgatgaagaatgtttgtttcctcaaggcaca
gatcaaagctggttgcagaaactgttcaactacctagctgacaatcctctgtttgagaag
cccaggttatcaaatgaggcatttacgattcaacactttgcagacaaggtggaatatcaa
tgcagaggtttccttgaaaagaacagggacactctctatgaagaactggttgacattctc
agagccagtaagtttccctttctggccaactttttcaaagaggaggagcttcgtgctgtg
aacggtaaaggtgtcaaagtgaggcccgccaggcccggagtgaaggcagccagtaaacag
ctgagagcctctgtgggagataagttctgcagctccctctctttactgatggaaacactg
aacgccaccactcctcattatgtgcgctgcattaagcccaatgatgaaaagctcccgttt
gaatatgactcgaggagggtggtgcagcagctgcgtgcctgcggagtcctcgaaacgatt
cgtataagcgcacagagttatccatccaggtggacatacaatgagttctacagccggtac
agtatcctgatgttgcatcaggaggccgacctcagtgacaagaagcagacctgcaagaat
gtccttcagaggctgattcaggaccctaaccagtacaagtttggtcggacaaagatcttc
ttccgagcgggacaggtggcgtacctggagaagctgcgcctggaccgcctgagaggagcc
tgtgtgaccatccagaaacacgtccgcgggtggagccagaggaggaagtacctgcgcatg
agagaggcggccgtcatcctccaacagtacatccgcggacagaggacaatccgtaaaacg
gtgagtgctgcaacgctgaagcagggctgggcatcgctggtgatccagaaacactggaaa
ggttaccgcatgaggcagatctacattgtcgtccgtgtggcatccatcaccatccaggcc
ttcacacgaggatggaaggcacgcaaacagttcaagacgatgatgaaggagcacaaagct
ttggttctgcagaagtacgctcgagcatggctggcacgccggcgtttccaaaccatgcgt
cgcctggtactcaacgttcagctctcctacagggtgcagcagctaaggaaaaagattgaa
gagcagagcaaggagaactgtggattggtggagaggctgaccaccttggccaactcgcac
tctcaaaccgtggagaagcttcagggtctggaggtaaagctggaaaaatccactcacctg
aaggcatctgtcgaggcaagagagaagaaagcgaaagaagacgctggtctgacaattgca
ttgcttcagaaggacatggatgcactaaacctcgaaaagcagaacttggagaaaaagttt
gaagcatccttcaaagaggcaaaggagaactttgatcatataaagagcagtcttctggaa
gagaaagaatatgaagcaaggcttcgaaagattgcagagagcaacactgagatccagaga
caggaccacgagaaggaagtggaaattctgaaagaggagatcaagagactgaaagacgag
cgagttggtttacagggtaagatggaggaggctggacaggtgaacgctgacctgcaggaa
caggtcatccagctcaccaaacacgttaaaaccatccccgagctccgtcgagacctcaac
aacctgcaaaaccagagaattaacatggatcgaaagatgaagcaacagtctgaacaagca
agagtgaaagtgaacgatatcacaagacaacttctgggtggtgttgtcgaagaggaggtt
cttttggggctaagtccagacgactcagagaagatttatgaagttgaagatatgctggca
gcctttgatggtctacagaaagctagcagaatacttgaaagccaccagaaggagcagaag
gaaaaatatgaatcccaagtggagggcttgaagttgaaagtggaccatcttgacaatgag
aacagcaagttgcaaaacctgtttcaggagaagagcaacgtcaacgagaacatccgccaa
gaggtttccaggctcagcagtgaaaactcagtcatacctgaactgaaactgcaggcttct
gacctgcagagacaaaaacaagaactggaggctcatgtggaggagcagagaaaagaactg
gcagaaaaaacagaggagatcacaaatgttctccaaaggaagattgaagatgagagctca
cagcgcaggcacttggaggagaaagcgggcgagctagaggagcagaaaaatgagcttcaa
gaacaactggaggagctggaagaggagactgatcacttgaagagacagcagctgatggag
agcgaggccaagagcaaactgagacaggatatttcacggcttactgctgagaatatggac
tttgaggagatgcttgatcacaaagacagattgataaagaaactccgcagtcaaataaaa
agccttgaaacatcacaaagagtgaaacaaacgtccgcgcctgccatccccaaggatttc
ctcggcatgttggagtacaaactagaggatggacccaggctcattcaaaacatcattcta
gacttaaaacccaaaggtgtggcagttaatatgatgcccaggctgccagctttcatcctc
ttcatgtgcatccgccatgtcgactacctgaacgatgaagacaaactcaaatctctgatg
aatgaaatgatcgcggctgtcaaaaaggtcatcttgagttatcacaaagactttgaggtg
ctgtcattctggctctcaaacacatatcagctgctaaactgtctgaagcaatacagcggg
gaggaggagttcatgaaacagagtactcctcgacagaagaagaactgcctgcagaatttt
gatttgtcagagcacaggcagattctcagcgacctggccatccacatctaccatcagttt
ctttcagtcatggaaaagagcctcactcccgcaattgtaccgggtatgttggagcatgag
agtttgcaggggatttccagcatgaagccgacaggattcaggaagcgttcaaacagcatc
tacgaggactcggagacctacaccatctcctccatcatccagcagttcagcaccttcctc
tccatcatgagccagcacgacatggagcagggcctcatcagacaggccgtcaagcagctc
ttcttcctggttggcgccatcaccctcaacaacatcatgctccgtaaagacatgtgttcc
tgcaggaaggggatgcagatcaggtgcaacatcagttacctggaggagtggctgaaggag
aaaggactgcagggctctaatgctatggacactttgaggccgctgtctcaggctgcctgg
cttttgcaggtcaacaagtccactgatgacgacgccaaggagctcgctgaaaaatgcacc
gaactcaacaccgttcagattgtgaagattttgaactcctacacacccatcgatgatttt
gagaagagggtgtcatcttcgttcgtccgcaaagtgcagtcattactccacgatcgtgaa
agctcctcacagctgatgctggactcggactatcgcttccaggtcacgtttcctttctgc
ccatccttacaggctctggagctgctgcaggtcccgagcagccttcatctggatttcctc
accaggatctga
DBGET
integrated database retrieval system
