Labrus mixtus (cuckoo wrasse): 132972603
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Entry
132972603 CDS
T10666
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132972603
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132972603
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132972603
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132972603
Cell adhesion molecules [BR:
lmix04515
]
Cadherins
Protocadherins
132972603
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
132972603
NCBI-ProteinID:
XP_060891549
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Position
1:16146617..16350329
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AA seq
1236 aa
AA seq
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MDLKDYYLLGALLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNKPVFKDGQIEVHIPENSAIGTSVVQLQASDADIGANAEIRYVFGTQVSPATKR
LFALNTTSGLITVQRLLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRRTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQTQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPAVTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPDDPAHEPIN
GTISLPTELEEQGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPMHTRQQGTLTRART
ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGSLL
TQPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPTLGSYQQPKSPVSGFGSQREWGPKDKLLNGHTLTRTWKNESGRSEHFVDRKQFG
SGEGHFTSSGMADIPLVSLKSCQPASCPDSPKDQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaagactattacctgctgggcgccctgcttgcctgcatatggctagatcct
tcaatagcccaagagctaatctaccccatcagagaggagttgcaagaaaatgtcctcatt
ggaaacataccaaaggacctaaacatttcccatacaaatgctgccactggagcaagtgct
aatctggtgtaccggctcgtctccaaagcaggagataacccgctggtacgtgttctgagc
agcacgggtgagatatttacaacatcaaaccgaatcgacagagagaagttgtgccccggt
ccctcctttgaggacagcgagtgctcctttgaaattgaagtggtcatcctgcctaatgat
tatttcaggctgattaagatcaaaataattgtgaaagacacaaatgataatgcccccatg
ttcccgtcccctgtgatcaacatctcaatcccagagaacacgctcattaacagccgcttt
gcgattccttctgccactgacccagacactggccccaacagtgtccacaagtacgagctg
atcaatgggcagagtgccttcggcttagacatagtggaaacgcctgagggggagaagtgg
ccccagctcattgtgcagcagaatctggatagagaacagaaggatacgtatgtgatgaag
atcaaagttgaggacggtggcagcccacagaaatccagcactgctatacttcaagtaaca
gtaactgatgtcaatgataacaagcctgtgttcaaagatggtcagatagaagtgcatata
ccagagaactccgctattggcacgtctgtggtgcagcttcaggcctcagatgcagacata
ggggctaatgcagagatacgttatgtgtttgggactcaggtgtctcctgccacaaagaga
ctctttgcattaaatacaacatctggccttattacagtgcagaggcttctggacagagag
gagactgctattcataagctctctgttttagccagtgatggcagctccagtcctgccagg
gctactgtgactataaatgtgactgatgttaatgacaatccacctaatattgacctgaga
tacataatcagtcccattaatggcactgtttttctttctgagaaggatcccatcaatacc
aagattgctctcataacggtgtcggacaaagacaccgacatcaacggcaaggtcatttgt
ttcatagagaaggacgtgcccttccatctcaaagctgtgtatgacaaccagtatctgtta
gagacatctgctctgctcgactatgagggaacaaaggaatacaactttaaaattgtagct
tcggactcggggaaaccgagcttgaatcaaactgcgttggtgagagtgagactagaggat
gagaatgacaacccgcctattttcactcagccagtaattgagctggctgtcatggaaaac
aacaaacgtgacctgttccttactactcttagcgccacagatgaggacagtggcaaaaat
gctgagatagtctatcagctgggaccgaatgcatcattcttcgatcttgaccgcagaact
ggggtcctgactgcatccagagttttcgatcgggaagatcaagacagatttctcttcact
gtaactgcaagagataatgggacaccccctctgcaaacccaggcggcagttattgtaact
gtactggatgaaaatgataacaaccccaagttcactcacaaccactttcagttctttgtg
tctgagaatcttcctaaatacagcacagtgggagttataactgtgacagattcagatgct
ggagaaaatgctgctgtttctctttccatactgaatgacaatgagaactttatcctggat
ccttactctggggtgatcaaatctaatgtgtcatttgatagggagcaacagagctcctac
acctttgatgtcagggctgtggacagtggcaggcccccttgctcctcagctgccaaggtg
accatcaacgtcattgatgtgaatgacaacacccccatcgtcatctaccccccctccaac
acatcgttcaagctggtccctctgtcctctatcccgggatctgtggtggcagaagtgttt
gcagtggatggtgatacagggatgaatgcagagctgaaatacaccatcgtgagtgggaac
aacaaaggtctgtttcgaattgaccctgtcacagggaatataactctggaggaaaaacca
gcagtgactgacataggcttacacagattagtggttaatataagtgacctgggatatcct
aaatctcttcatactctggtgctggtattcctatatgtaaatgacactgtgggcaactca
acactcatctatgacctcatccgacgcactatggaaaccccaattgaccgcaacatcggt
gaaagcagtgaaacttatcaaagtggtgattatttaaccataatgatagcctttgttacc
ggggccttagtggtgattattgttatctttgtcacggtgctgctgcgctgccgccacgct
tccaggttcaaagctgcacagaggaaaaaacagggagctgagtggatgtcacctaacact
gagaacaagcagaacaagaagaagaagcgcaagaaaaggaaatccccaaaaagctccttg
ctcaactttgtgaccatcgaggggaacaaacctgacgaccccgctcacgagccgatcaac
ggaaccatcagcctgccgacggagctggaggagcaagggattggacgctttgattggaat
gccacgccaaccacgaccttcaaacctagcagcccagacctggcccggcactacaagtcg
gcctcgccgcagtcggccttccacctcaaggcagacacgccggtctcagtgaagaaacac
cacgtgattcaggagctcccattggataacacatttgtcgggggctgcgacaccctttcc
aagaggtcctcaacgagctccgaccacttcagtgcctcagagtgcagttcccaaggagga
ttcaagacgaaggggcccatgcacaccagacagcagggaacattaactcgtgcccgaact
gaactgaatcctgaatatctggatctccgtccacgtgctgagctgaaccctgaatactgg
accccttgcacccctttatcgcagcggcgcgtcacgtttcacctgccggacggctctcag
gagagctgcagtgacagcggtctgggggaccacgagcctgtaggcagtggctccctcctc
actcaacctctccctctggtgcaggcgcaggacgacttctacgagcaggcctcccccgac
aagaggaccgaagctgacggcaactctgatcccaactctgatggccccctgggacctcgt
ggtctagtggaagctacagagatgtgcacacaggaatgcctcgtcctgggacattcggac
aactgctggatgcctccgacattgggttcataccagcagcctaagtcacccgtgtctggc
tttgggtctcagagggagtggggtcccaaggacaaactcctcaatggacacactttgacc
cgaacctggaaaaatgagagtggacggtcggagcactttgtcgacaggaagcagtttggg
agcggagaaggacacttcaccagcagtggcatggctgatattccactggtaagtctgaag
tcgtgccagccagcctcctgcccggacagcccaaaggaccagcagctataa
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