Labrus mixtus (cuckoo wrasse): 132972740
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Entry
132972740 CDS
T10666
Symbol
cntn1a
Name
(RefSeq) contactin-1a
KO
K06759
contactin 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04514
Cell adhesion molecule (CAM) interaction
lmix04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132972740 (cntn1a)
04517 IgSF CAM signaling
132972740 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132972740 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lmix00537
]
132972740 (cntn1a)
Cell adhesion molecules [BR:
lmix04515
]
Immunoglobulin superfamily
Contactins
132972740 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lmix00537
]
Others
132972740 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Sp38
Pur_ac_phosph_N
C2-set_2
Ig_PDGFR_d4
Receptor_2B4
C2-set_3
Motif
Other DBs
NCBI-GeneID:
132972740
NCBI-ProteinID:
XP_060891776
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All DBs
Position
4:9943063..10007789
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AA seq
1024 aa
AA seq
DB search
MLHLLLLLHLLVLSLSPADASTHGEVPDFYGDEATGYGPVFEEQPVDTIYPEESPEAKIT
MSCRARASPPASYKWMLGDTAVDFDAKGRHYSLVGGNLVISNPVKTQHVGKYSCLASNEY
GTVISQVASVQFGYLDLFSSEERESVYVKEGQGAVLLCAPPPHYPEELSFRWILNEFPTF
IPLDKRRFVSQITGNLYISKVDSSDSGNYSCIASSPSISKSVFSNYIPLVPLAERPIRKY
PADLKVKFPDTTALVGQNITLECFALGNPVPEVLWKKLDGQLPANHEVRMAGAHLHLFNV
QFEDGGNYQCEAVNSRGKDYHAARVSVEAYPEWVEHISSTEKDLSSDYTMPCIASGKPKP
HIRWLKNGELTDRKEMKFSRLTFEDSGMYQCIVENHHGVIYANAELRVFACAPTFKHNPV
KRVLAARNGRVVIQCRPKAAPKPSFYWSKDTELLHNSTRVFIWDDGSLEILNVTQADEGK
YTCFAENDRGKANSTGTLLVTESTKITLAPSNADVKVGDNAWMQCAASHDSSLDITFVWS
LDGRVIDLHKDSQHYERTPNGSSNGELMIKNAQLKHSGRYTCTAQTPIDNITASAHLVVR
GPPGAPGGVRVMNKADKSVTLQWSRGADNHSPISKYTIQYRDSFSDVWKTATTSPAAIEG
NTEMATVVDLFPWVEYEFRVIATNTLGTGEPSSPSPKDKTQEALPVVAPSDVSGGGGTSR
ELTITWTPVQPQYYYGPNFGYIVAFKPEGENEWMKVTVADPQAKRYVHKDSNIPPATEYQ
VKIKAYNSKGEGPFSQSAFIFSAQDAPSEAPVSVEGRALSATEAFVWWLPLPQSNIDGYQ
VKFWRAADESEGDAQSVQVSSKDNHTRLEGMKHSTYYLIVVRGYNYAGYSPPSERLQILT
KKPPPSQAPKITGKKIKGAAVNIAWEQVESLPSESSVDGYKVLCTEEGVPQATLYTTTRR
YIDLNLKPYKNYVVEVRVHTEGGDGAVAKIDIMGTQGYRSGGVMVAWSHSVLSLLLVALL
CLNL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctcctcctgctcctccatctcctggtcctctcactctcccctgcagatgca
tcgacgcatggggaggtacccgacttttatggagacgaagccacaggttacgggccggtg
tttgaggagcagccggtggataccatctacccagaggagtcgcccgaggcaaaaatcacc
atgagctgccgggcccgggccagtccacctgcttcatacaagtggatgctgggggacaca
gcagtagactttgatgcaaagggcaggcactacagtttagtaggaggaaacttggtcatc
agcaacccggttaaaacacaacatgtaggaaaatactcctgtttggcctccaacgagtac
ggcacagtcatcagccaagtggcctcggtccagttcggatatctcgatctcttctcgtcg
gaggagagagagtcggtgtatgtcaaagaggggcagggcgcagtgctgctctgtgctccc
ccaccacattatccagaagagctttcgttccgatggatactcaatgaattccccaccttc
attccactggacaaacggcgttttgtctcccagataacgggtaacctctatatctccaaa
gtggattcgtcagacagcggcaactattcctgcatcgcatccagcccatccatttctaag
agtgttttctccaactacatccccctcgtgcctctggctgaacgtcccatcaggaaatac
ccagccgacctaaaagtcaagttcccagacaccactgcgctggtggggcagaatatcacc
ttagagtgcttcgctttgggaaaccccgtccctgaggtcctctggaagaagttagacgga
cagcttccagccaatcacgaggtgcggatggcgggggctcacctgcacctgttcaatgtg
cagttcgaagacggcggcaactaccagtgtgaggctgtgaactcgagagggaaggactac
catgctgcacgcgtgtctgtcgaagcttatcctgagtgggtggagcacatcagcagcaca
gaaaaagacctcagcagtgattacaccatgccctgcattgccagtggcaaacctaaacca
catatccgctggctgaaaaatggagaactgactgacaggaaagaaatgaagttcagcaga
ttgacgtttgaagattcagggatgtatcagtgcatcgtggagaatcaccacggagtcata
tacgccaatgcagagctgcgtgtgttcgcctgtgctcccacattcaaacacaacccagtg
aagagagtcctggctgcgagaaacggccgggtggtgattcaatgtcgacccaaagcggcg
ccaaagccgagcttctactggagcaaagacaccgagctgcttcataactctaccagggtg
ttcatctgggatgatgggagtctggagatccttaacgtgacccaagcagatgaaggcaag
tacacctgcttcgcggagaatgacagagggaaggccaacagcacgggcactctgctggtt
acagagtccacaaagatcaccttggcgccgtctaacgctgacgttaaagtgggtgacaac
gcctggatgcagtgcgccgcatcacatgactcctctcttgacatcaccttcgtatggtct
ctggatggccgggtcatcgacttacacaaggacagccaacattatgaacgcaccccgaac
ggaagctcaaacggagagctgatgatcaagaacgctcagctaaagcattctggacgctac
acctgcactgcacagactccaattgacaacattaccgcctccgcccacctggtggtgagg
ggtccccccggtgccccaggtggggtgcgagtgatgaacaaagctgacaagagtgtgacg
ttgcagtggagccgtggggcagacaaccacagccccatctccaaatataccatccagtac
agggactccttctctgatgtctggaagactgccactacatctcctgcagctatagagggg
aacacagagatggccaccgtggtggaccttttcccctgggtggaatatgagttcagggtg
atcgccaccaacactctgggcacgggggagccgagcagcccgtcaccgaaagacaaaacc
caggaagcacttcctgtggtggcgccctcggacgtcagcgggggcggagggaccagcaga
gagctgaccatcacgtggacgcctgtacagccccagtactactacggccctaattttgga
tacattgtagcctttaaaccagaaggcgaaaacgagtggatgaaggtgacggtagccgac
ccccaggcaaagcgctacgtccacaaagactctaacatccctccagcaacagagtatcaa
gtcaaaatcaaagcatacaacagcaaaggagagggaccgttcagccagtcggctttcatt
ttttctgcacaggatgctccttctgaagctcctgtcagtgttgaaggcagagctctctct
gccacagaagccttcgtgtggtggctgcctctcccacagagcaatatagatggataccag
gtgaagttctggagagctgcggatgagagtgagggagacgcacagtcggtgcaggtctcc
agcaaagacaatcacactagattggagggtatgaagcacagcacctactatcttattgtg
gtccggggctacaactatgctggatacagtccgcccagcgaacgcctacagatcctgacc
aagaagccgcctccaagtcaagccccaaaaataactggtaaaaagatcaagggcgcggca
gtaaatattgcctgggagcaagtggaatcactgcctagcgagtcgtccgtagatggttac
aaagtcctgtgcacggaggagggcgtcccacaagccactctgtacaccaccactcgacgg
tacatagaccttaaccttaaaccatacaagaactatgttgtggaggtccgggtgcacaca
gagggaggagacggggcggtggcaaaaatcgacatcatgggaacccaaggatacagaagt
ggaggtgtcatggtcgcctggtctcacagcgtactctccctgctcctggtcgctctcctc
tgcctgaacctctga
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