Labrus mixtus (cuckoo wrasse): 132972845
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Entry
132972845 CDS
T10666
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix02010
ABC transporters
lmix04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132972845 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132972845 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmix02000
]
132972845 (cftr)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
132972845 (cftr)
Transporters [BR:
lmix02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
132972845 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
DUF87
SMC_N
AAA_29
RsgA_GTPase
AAA_16
T2SSE
nSTAND3
AAA_22
MMR_HSR1
FtsK_SpoIIIE
NB-ARC
AAA_23
nSTAND1
Dynamin_N
MeaB
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-GeneID:
132972845
NCBI-ProteinID:
XP_060891946
LinkDB
All DBs
Position
4:complement(13935390..13975815)
Genome browser
AA seq
1509 aa
AA seq
DB search
MQKSPVEDANFLSQYFFWWTTPLLRKGFKKKLELSDVYKAPSYDLADNLSERLEREWDRE
VVSAKKQPKLMRALARCFLGPFAFFGVLLYLGEASKTVQPQLLGRIIASFDPFHAAERGQ
GYFLALGLCLLFTARFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNGFCALAALTLLGIIQAW
LSQKMGPHRVKRGGMINRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSAAYFFSAILVIVSAIVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVKKIEEFLMKEEYRVLEYNLTTTEVELVNVSASWDEGIGELFEKIKQENKKN
GHLNGDAGLFFTNLYVTPVLKNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTSWIMPGTVRDNILFGLTYDEYRYTSVIKACQLEEDFALLPEKDETFL
VEGGVTLSGGQRARLGLARAVYKDADLYLLDSPFTHLDIVTEKEIFEKCVCKLMASKTRI
VVTSKLEHLKRADKILLLHNGDCYFYGTFSELQAQRPDFSSLLLGMEAYDNINAERRSSI
LTETLRRVSIDETAGFRGPEPMRQSFRQQHPPIIISGPQGHAGGDGYPEKRKQSLILSPL
AAARKFSFIGNSQQTANTLADDGVRELSDRKFSVVPEDDQVEEVLPRGNLYHHQLPHLHG
QRRQSVLAFITYSQGQERREQMQSSLRKRLSITPQCDLASELDIYARRLSKDSVYDISEE
VDEEDMEQCFADERENIFETTSWSTYLRYLTTNKSLIYVLLFIIFVFIIEVAASVIGIYL
ITEEIRRDGENPSSPNYIDEQHPNASSPPVHLAVIVTPTSAYYIIYIYVATSESVLALGF
FRGLPLVHTLLTVSKRLHEQMLSAVIRAPMAVLNSMKTGRIMNRFTKDMATIDDMLPLVL
FDLIQLTLIVTGAIFTVSIMRPYIFIAAIPLAAIFVILRKYFLRTGQQLKLLEAEARSPI
FSHLIISLKGLWTIRAFGRQTYFETLFHKALNTHTAAWFHYLATLRWFLFRCDMIFVLFF
TAAAFIAVGTNQDKPGEVGIIVALAMLILGTFQWAVITSITVDGLMRSVDRVFKFIDLPS
EEPLPPGKSGGKGGPGLVIDNPHAQESWPNRGHMDVQGLTVKYTEAGRAVLSDISFSVEG
GQSIGLLGRTGSGKSTLLSALLRLASTDGEISIDGVSWSSVSLQTWRKAFGVVPQRVFIL
TGTFRMNLDPHGRHSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGNVLSNGHKQLLCL
ARSILSKARILLLDEPSAYLDPITLQVLRKTLKHAFSDCTVILSEHRVEPLLECQSFLMI
EGSSMKSYDSIQKLLNETSHLKQAMSPADRLRLFPNLHRLNSSKRAPPQTAKISSLPEEA
EDEVHDTRL
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcaccggtggaagatgcaaacttcctctcccaatatttcttctggtggacg
acaccgctgctgaggaagggcttcaaaaagaagttagagctttcagatgtgtacaaggct
ccgtcttatgatctggcagacaacctctctgagagactcgaaagagaatgggacagagag
gtggtgtcagccaagaagcagccaaagctgatgagagcgctggcccgctgcttccttggc
cctttcgccttctttggggtcctcctctacctcggggaggcttcaaagacagtgcagcct
cagcttcttggtcgcatcatcgcctcctttgacccgttccacgctgccgagcgaggccag
ggatacttcctggcgcttggcctgtgcctcctcttcaccgcccgcttcctcctgctgcaa
cctgccatctttggccttcatcacctgggcatgcagatccgcatagccctcttcagtctc
atatacaaaaagaccctgaagctgtcaagcagagtcctggataaaatcagcaccggtcag
ctggtcagtctgatgtccgcccacctcaacaagctggacgagagcttgggtctggcccat
tttgtatggatcacccccctgcagtgcatactgtgtgtgggtctgatctgggagctgatc
gaggtaaacggcttctgtgcacttgcagctctgactctgctgggcatcattcaggcttgg
ctctcccagaagatgggacctcaccgggtgaagagaggagggatgatcaaccgccgcctg
gctcttacctcagagatcgtggagaacatccactctgtgaaggcgtatggctgggaggag
gtgatggaaacaatcatcaaaaacatcaggcaggatgagatgacgctgacaaggaagatc
ggttctctgcgttacttctacagtgccgcatacttcttctccgccatcttggtcatcgtg
tctgctattgtgccgcatgcgctcagtaagggcatcatcttgcggcggatcttcaccacg
gcttcctactgcatggtgctgcgaatgacgctgacccgccagctgccaggatccattcag
atgtggtacgacacactggcactggtcaagaagatcgaggaattcttgatgaaggaggaa
tacagagtgctcgagtacaacctgaccacaactgaggtggagctggtcaatgtgtctgca
tcctgggacgagggcattggtgagctctttgagaagatcaagcaggagaacaagaaaaac
ggtcacctgaacggtgatgccggcctcttctttaccaacctctacgtcacacccgtactc
aaaaacatcagcctgtacctggagaagggcaagatgttggcggtggctggatccactggc
tcagggaagagttctttgctcatgatgatcctgggagagttggtaccatcggagggtaaa
atcagacacagcggtcgcatctccttctcaccgcagacttcctggatcatgccggggacg
gtcagagacaacatcctgtttggactgacctatgatgaataccgctatacctctgtcatc
aaggcctgccagctggaagaggactttgccttgctgccagagaaagacgagacgttcctc
gtagaaggaggggtgacccttagcggtggacaaagggctcgccttggcctggccagggct
gtgtataaggatgcagacctctacctgctggattcaccattcacccacctggacatcgtg
acggagaaagagatctttgagaaatgtgtctgtaaacttatggcctccaagactcgtata
gtggtcaccagcaagttagagcatctcaaacgggcagacaaaatcctgctgctccacaac
ggagactgctacttctatggcaccttctccgagctgcaggcacagaggcctgacttcagc
tccctcctccttggcatggaagcctatgacaacatcaacgcagagcgacgcagttccatc
ctcacagaaactctacgcagggtctctatcgacgagacggctggatttcgaggcccagag
ccgatgcgccagtctttcaggcagcaacaccctccaataataatctctggaccgcaaggc
cacgctggaggtgacggctacccagaaaaacgcaaacagtccctcatactcagccccctg
gcggctgctcgcaagttctccttcatcggaaactcccaacagactgcaaacactctggct
gacgatggggttcgggaactctctgataggaaattctccgttgtacccgaggatgatcag
gtagaggaggtgctccccagggggaacttataccatcatcagttgccacacctccacggg
cagcggcgtcagtccgtgctggcattcatcacttactctcagggccaggaacgcagagag
cagatgcagtcttccctcagaaagagactgtccatcacaccacagtgtgacctggcatcc
gagctggacatttacgctcgccgcctgtccaaagacagcgtttatgacattagcgaggag
gtggatgaagaagacatggagcaatgctttgcagatgaacgagagaacatctttgaaact
acctcatggagcacctatctacgctacctaaccaccaacaagagcttaatctacgtccta
cttttcatcatatttgtcttcatcattgaggttgctgcttcagtcattggcatttacctc
atcactgaggaaatcaggagggatggagaaaacccttcttcacccaactacatcgacgag
cagcacccaaatgcctcatcgccccccgtccacctggcagtcattgtcacaccgaccagc
gcttactacatcatctacatttacgtggcgacatcagagagtgtgctggctttaggattc
ttcaggggcctcccattggtgcacacattactcactgtgtccaaacgactgcacgaacag
atgctcagcgccgtaatacgagcacccatggctgtgctcaactccatgaagacaggtcgg
atcatgaacagatttacgaaagatatggccaccatagatgacatgctgcctttggtcctg
tttgacctcatccagctgacattgattgtcacaggtgccatcttcactgtgtccatcatg
cggccttacatcttcatcgctgccatcccattggctgccatctttgttatcctcagaaag
tacttcttacgaacaggacagcaactcaagctcctggaggctgaagctcgtagccccatc
ttctcccacctcatcatttccctgaaaggtttgtggactattcgggcctttgggcgtcag
acctacttcgagacactcttccacaaggcgcttaacactcacacagccgcctggttccac
tacctggccacactgcgatggttcctcttcagatgtgatatgatctttgtactgttcttc
actgcagctgccttcatcgctgttggaaccaaccaggacaaaccaggggaggttggcatc
attgtggcccttgcaatgctcatccttgggactttccaatgggctgtcataaccagcatc
actgtggacggactgatgcgatcagttgatcgggtgtttaagtttatcgacctgccgtca
gaggagccgctccctccagggaaatctggtggtaaaggaggccctggcctcgtcatcgac
aacccacatgcccaagaaagctggcccaaccgcggtcacatggacgtccagggcctgact
gtgaaatacactgaggctgggcgtgctgtcctcagtgacatctccttctccgtggaggga
gggcagagtataggtctgctgggtcgaacaggttcagggaagagcaccctgctctcggct
ctgctgcgtctcgcctccactgatggagaaatctccatcgacggcgtctcctggagctcc
gtctccctgcaaacgtggaggaaggcctttggagtggtgccgcagagagtcttcattcta
actggaactttccggatgaacctggacccacatggacgtcacagtgatgaggagctgtgg
agggtagccgaggaggtgggtttgaagtctgtcatcgagcagtttccagacaagctggac
ttccagctggaagacggaggcaacgtgttgagcaacggacacaaacagctgctgtgtctc
gcccgctccatcctcagcaaggctcgcatcctgctgctggacgaaccctctgcctacctc
gaccccataacgttacaggtcctgaggaagacgctgaagcatgcgttctctgactgcaca
gtcatcctatcagaacacagagtggagccactgctggagtgtcaatcattcctgatgatt
gaagggagctccatgaaaagctacgactccatccagaagctcctgaacgagacgagtcac
ctgaaacaggccatgagccccgccgaccgactgcgcctcttccccaaccttcatcgcctc
aactccagcaagagggcgccgcctcagaccgctaaaatctcgtctctgccagaggaagcg
gaagacgaagtccacgacactcgcctctaa
DBGET
integrated database retrieval system
