Labrus mixtus (cuckoo wrasse): 132973032
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Entry
132973032 CDS
T10666
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132973032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmix03021
]
132973032
03036 Chromosome and associated proteins [BR:
lmix03036
]
132973032
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132973032
Coactivators
SAGA/TFTC/STAGA complex
132973032
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132973032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
132973032
NCBI-ProteinID:
XP_060892214
LinkDB
All DBs
Position
4:complement(19831156..19848874)
Genome browser
AA seq
972 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLGDRKAPGASYSDGKRDAAPPPVTHFSGK
VREPPGSVEPQQGHQKAGLTGEQGANESLSGKPLTSSTSSVSAGAVTPAAVAPQTVGASP
TVPPAPGPGTLSTQSGAASFPRAAVQGPSTTTGPPGEAIRTASPGVQSLNGSPGAVKLVN
SPAAPPAVGSGSVISTVSPGGSTIIAPMASQPGFPGHPQTSAVTPGGPLQRHTGPVTQNG
VDPKGAPLVVPGAPSPQVLNHSTAPLHTKVLLPTQPTSGSSVILTSTPPLTAQSPVSQTQ
TGPSPAPGGMKTTVNGVAPPTVALVRPPGVAVGATSVQQQRPGLVATPTRAAAPQPQIAV
RPQQQTTIQLPPGFSMPPGMVLVRTETGQLVMVPQQVLAQAQAKTQQSQTVGNITQRPAT
PTAAATIRVSTASTVPQTVRLATPAQTRMVHSPSTNTVQKAITVAPGGAAVSVKMTPPQK
AQTVITAGGTPTAKPAGVPTTPHTSTPPTTTTTPANRVTVVSQEMQENVKKCKNFLATLI
KLASHNSPSPDTSKNVKALVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLKKSLPAL
RQSLLSSQQSLVTPSTSVPPLAAPGSVTTTAIRPRLPISPASSTVRLNPPLTNTLAVNRA
GAQSVQTRSPVVFSQSIRPQGNLVRGPTTIIGKSPVNLAAQANQRKLSDPGGGTFRDDDD
INDVASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPTGLLHRRILDTAKKLGVSE
VPLEVVNFISHATQSRLRSLLEKVSAVAQHRADGGKDEEHHEPTSDVRSQLRFFEQLERM
EKQRKDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIG
PRKKRKMDSPGGSTAGTEVASGSGAGSSSSPASSRQQLRQRITRVNLRDFIFCLEQDRTT
ARSLTLYKALLK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtggatgagaaagca
gttagcgacctagttggctctctggaatcacagctgggcgaccgaaaggcacccggggcg
tcttattccgacgggaaacgggacgcagctccgccgccggttacacacttctcaggaaaa
gtgcgcgagccaccggggtctgtggagccgcaacaagggcatcagaaagcggggttaacc
ggagaacagggcgctaatgagtcgctttccggtaaacctctcacctcctctacctcctct
gtgtccgccggggccgtgactcccgccgcagttgctcctcagacagtcggagcttcaccg
accgtcccccccgcaccgggacccggaactttgagcactcagtccggggctgctagcttc
ccccgagcggcggtccagggtccgagcaccaccaccggccccccgggggaggcgatccgg
accgcgtctcccggagtacaaagtttgaacggcagccccggagctgtgaagttggtgaac
tcccccgcagcccccccagcggtcgggagcgggtctgttatcagcactgtcagtcccggg
gggtccacgatcatcgcccccatggcctcacagcccgggttccccggacacccacagacc
tcagcggtgacccctggtggacccctgcagagacacactggcccagtgacccagaatgga
gtggaccccaaaggagccccactggtggtcccgggtgcaccctcgcctcaggtcctgaac
cacagcacggcccctctgcacaccaaggtactgctgcccacccagcccacctccgggagc
tccgtcatcctgaccagcaccccccctctcaccgctcagtcccccgtcagtcagacccag
acagggcccagtccggctcccgggggcatgaagaccaccgtgaatggggtggccccgccc
actgtggccttggtaagaccaccaggcgtagctgtgggggccacctccgtccagcaacag
aggcctgggctggtggctacacccaccagagcggcggcccctcagccccagattgcggtc
cggcctcagcagcagaccaccatccagctgccccccgggttctccatgccgccaggtatg
gttctggtccggaccgagaccggtcagctggtgatggtccctcagcaggtcctggctcag
gctcaggcaaagacgcagcagagccagacggtcggcaatatcacacagagaccagccacg
ccaaccgccgcagccaccatccgagtttccaccgcctccacggttcctcagacagtccgt
ttagctacccctgctcagaccagaatggttcattctccctccaccaacacagttcagaag
gccatcacggtggctcctggcggtgctgcggtgtcggtgaagatgaccccccctcagaag
gcccagaccgtgatcacagcaggcgggacgcctacggccaaaccagccggagtccccact
accccccataccagcacgccgcccaccactaccaccacgccagctaacagagtcacagtg
gtgtcacaggaaatgcaagaaaacgtgaagaaatgcaagaacttcctcgccacgctcatc
aagctggcatcccacaactcgccctccccagatacctccaagaatgtgaaggccctggtg
caggacctgctggatgcaaagatcgagcctgaggagttcaccactcggctgcaggctgag
ctcaagtcctccccacagccctacctcatccccttcctcaagaaaagtctccctgctctc
cgtcagtctctgctcagcagtcagcagtccctggtgaccccgagcacatcagtgcccccc
cttgctgcccccggctccgtcaccacaaccgccatcagaccacgcctacccatcagcccg
gccagcagcacagtcagactgaacccgccgctcaccaacactctggctgtgaacagagca
ggtgctcagagcgttcagacccgctcacctgtcgtcttcagtcaaagtatcagacctcaa
gggaatctcgttagaggacctacaactatcatcggaaaaagtcctgttaaccttgcagct
caggccaatcagaggaagctgagtgaccctgggggcgggactttcagagatgacgatgac
atcaacgatgtggcgtccatggctggcgtcaaccttaacgaggaaaacgcccgtatccta
gcaaccagctctgagctggtagggacaaagatcaggtcgtgtaaagacgagtccttcctg
cccaccggcctgctgcaccggcgcatcctggacacagctaagaagctcggtgtgagcgag
gttcccctggaggtggttaacttcatctcccatgccacccagtccagactgcgctcgctg
cttgagaaggtttcagccgtcgctcagcaccgagcggacgggggcaaggatgaagagcat
cacgagccgacgtcggacgttcgctctcagctgcgtttctttgagcagttggagcggatg
gagaaacagaggaaagacgagcaggagagagagatcctgctgaaggctgccaagagtcga
gcgagacaagaagatcccgagcaggctcgcctgaagcagaaggctaaagagatgcaacag
caggagctggctcagatgagacaacgagacgccaacctcacagcgctcgccgccatcggg
ccgcgcaagaaacgcaaaatggactcaccgggggggtcgacggctggcacagaggtggcg
tcaggctcgggtgcaggctcctcctcctcgccggcctcctcacgccagcagctccgtcag
cggatcacacgagttaacctcagggacttcatcttctgtctggagcaggaccgcaccacg
gctcgctctctgacgctctacaaggctctgctgaaatga
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