Labrus mixtus (cuckoo wrasse): 132973167
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Entry
132973167 CDS
T10666
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132973167 (ctcf)
03036 Chromosome and associated proteins [BR:
lmix03036
]
132973167 (ctcf)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132973167 (ctcf)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132973167 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
132973167
NCBI-ProteinID:
XP_060892424
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All DBs
Position
4:22988215..23000027
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AA seq
843 aa
AA seq
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MDGGPTEGVGVVEVPSKDFPSIQAVHSQDAMVADLLQQAAEAGGVVEGQAGVVLEQGHGD
GMVASQQQLMEAAVGVGVEGGAGVEMMVMDSLDPTLLQMKTEVIDASVGGSTTTVGVVGG
VAGSAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQGTYVDT
TAMPKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEEGGVVHPVEEDEMGSHQLLEE
GEDEPMQPPNEDPTWSKDPDYQPPIGGIKKTKKGKKSRLRYAEGDKDMDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCD
AVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFR
QKQLLDMHFKRYHDPNFVPTAFVCPKCNKTFTRRNTMARHSENCNGEVDETENGAETPKK
GRRGRKRKMRSRRDDDDSEEDHVEQDDEEEVEGEEEAALLQEEEEEEEVDSMELDQAPAA
IPVPAPDEPPVKRKRGRPPKNAPKPPTPSKPVRVATKTPLAAAAIIQVEDESTGAVENII
VKKEDGDTSATSPLEQGVALTVEGVGLDGEGVETVELAVNEETAVTAANGDLTPEMILSM
MDR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggacggagggccaacagagggtgtaggggtggtggaggtcccctccaaagactttccc
tccatccaggccgttcacagccaggatgcaatggtggctgatctcctccagcaggcagct
gaggcggggggcgttgtagagggacaagctggagtggtcctcgagcaaggtcatggagat
ggaatggtagcgagccaacagcagctgatggaagcagcagtgggggttggtgtggaaggg
ggagcgggggttgaaatgatggttatggactcgctggatccaaccctattacagatgaag
acagaggtgatagatgcttcagtaggcggttcaactactacagtgggtgttgttggagga
gtagcaggttctgcgcaccaagcaactgtaacaacagtagaccagactcaaatcatcaca
ctacaggtggtaaacatggaggaacaggcggctctgggtcttggtgagctccagctggtc
caggttcctgtttctgccactactgtggaggccctgcagcaaggcacttatgtagacacc
actgctatgcctaaggatggagacccagtcatctgccacaccctgccactgcctgaaggc
ttccaggtagtcaaggttggtgctaatggggaggttgagacagtggagcaggaggaggag
ggaggagttgtccaccctgtagaggaagatgagatgggtagccaccagctcctggaagaa
ggggaggatgagcccatgcaacctccaaacgaagacccaacctggtcaaaagacccagac
tatcagcctccaattggaggtatcaagaagaccaaaaagggtaaaaagagtcgtcttcga
tatgctgaaggagacaaagacatggatgtcagtgtgtatgactttgaagaagaacagcag
gagggccttctgtctgaggtaaacgctgagaaggttgtgggcaacatgaagccaccgaaa
cccaccaagatcaagaagaaaggagtgaagaagacattccagtgtgagctgtgcagctac
acctgccctcggcgctccaacctggacagacacatgaagagccacacggacgaaaggcct
cacaagtgtcacctgtgtggaagagccttcaggacggtcaccctgctgaggaaccatctc
aacacacacactggaactcgtccacacaagtgcacagactgtgacatggcttttgtgact
agtggagagctggttcgtcatcgtcgctacaaacacacacatgagaaacccttcaaatgc
tccatgtgtgactatgctagtgtggaggtgagcaaactaaagcgtcacattcgttcccac
accggtgagcgtccattccagtgcagcctttgcagctacgccagcagagacacatacaag
cttaagagacacatgaggacacactcaggagaaaaaccttacgagtgctacatctgtcac
gctcgcttcactcagagtggaaccatgaagatgcacatcctgcagaaacacaccgagaat
gtggcgaaattccactgtccacactgtgacacagtgattgcacggaaaagtgacctgggt
gtccacctccgaaagcagcactcattcatagagacggggaagaagtgtcgttactgtgat
gccgttttccatgagcgctacgctctgatccagcatcagaagtctcataagaatgagaag
aggttcaaatgtgacatgtgtgactactgctgtcgccaggagcgccacatggtgatgcat
cgtcgcacccacacaggagagaaaccgtacgcctgcagtcaatgtgaaaagaccttcaga
cagaagcagctgcttgacatgcacttcaagcgctaccatgaccccaacttcgtccccacc
gcctttgtctgccccaagtgtaacaagaccttcactcgcaggaacaccatggctcgccat
tctgagaactgcaacggtgaggtggatgagactgagaacggagctgaaaccccgaagaaa
ggaaggaggggtagaaagaggaagatgaggagcaggagagatgatgatgatagcgaggag
gatcatgttgagcaagacgacgaggaagaggtggagggtgaggaggaagcagcactgcta
caagaagaagaagaagaggaggaggtagatagtatggaactggaccaggcccctgccgcc
atcccggtgccggctcctgatgagccacctgtgaagaggaaacgaggccgacccccaaag
aatgcccccaaacctccaacacccagcaagcccgtcagagtggctaccaagacaccttta
gctgctgctgccatcatccaggtggaagatgagagcactggagcagtggagaacattata
gtgaagaaggaggacggcgacacctctgcaacgagtcctctggagcagggtgtggctcta
accgtggagggggtggggcttgatggggaaggggtggagactgtggagctggcagtaaat
gaggaaacagccgtgacagctgccaacggagacctgacaccagaaatgatccttagcatg
atggaccgatga
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