Labrus mixtus (cuckoo wrasse): 132973710
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Entry
132973710 CDS
T10666
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132973710
03041 Spliceosome [BR:
lmix03041
]
132973710
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132973710
Spliceosome [BR:
lmix03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132973710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132973710
NCBI-ProteinID:
XP_060893237
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All DBs
Position
5:1322857..1332454
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AA seq
387 aa
AA seq
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MMDEDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHA
AASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYESNSKHLSFDEVVSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQVPIPQQNKMSFPAA
QPYGQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGG
VMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgaggatcagcccagaaccttgtacgtggggaatctatccagggacgtcaca
gagccccttattctacaggtcttcacgcaaataggaccctgcaagagctgtaaaatgata
gtggatactgctggaaatgatccatactgctttgtggagttctatgaccacaggcatgct
gctgcctctttggcagcgatgaatggaaggaaaataatgggtaaggaggtcaaagtcaac
tgggccacgacgccaaccagccagaaaaaagacacaagtaatcactttcacgtctttgtt
ggagacctgagcccagaaataaccacagaagacgtcaaagcggccttcggtccattcggc
aggatatcagatgctcgtgttgtgaaagatatggcgacagggaaatctaaaggctatggc
tttgtgtctttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggttaggtggcagacagattcgaaccaactgggccacaagaaaaccccccgccccaaag
accacctacgagagtaactccaagcatctatcctttgacgaagtagtcagccagtccagt
cccagtaactgcaccgtgtactgcgggggggtcagcacaggactcacagagcaactgatg
agacagaccttctctccctttggacaaatcatggagatcagagtgttccccgacaaaggc
tactcgtttgtgaggtttaactcccatgagtcagcagcccatgcgattgtgtccgtgaat
gggacctcaatagagggccacatagtcaaatgctactggggcaaagagaccccggacatg
atgaacccaatgcagcaggtgcctatcccccagcagaacaagatgagcttccctgcagcc
cagccctacggccagtggggccagtggtacggcaacgggccccagatcagccagtatgtc
cccaacgggtggcaggtccccacctacggagtctacggccaggcctggaaccagcagggc
ttcaatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggg
gttatggagcctacacagggattgaatgggagtatgctagccaaccagcctggtatggga
gccgcaggataccccacacactga
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