Labrus mixtus (cuckoo wrasse): 132973766
Help
Entry
132973766 CDS
T10666
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132973766 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132973766 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lmix00536
]
132973766 (tncb)
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132973766 (tncb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
FN3_Tor_3rd
EGF
fn3_2
NDNF
hEGF
DUF4249
Motif
Other DBs
NCBI-GeneID:
132973766
NCBI-ProteinID:
XP_060893337
LinkDB
All DBs
Position
5:complement(4138443..4237313)
Genome browser
AA seq
1693 aa
AA seq
DB search
MWMKSLLLGCLTIGLLLELSNAGLVKKIIRHRREALIPKKTQENLTLPHPDQPVVFNHVY
NINVPTTSLCTVDLDSPGGSEVEHKSAPMDMQNTEHIEHTEDGDNQIVFTHRISIPKQAC
GCENQLPDIKDILNRLEMLESELSSLREQCSSGSSCCGAPVTGEVSTKPFCNGRGNWSTD
TCSCVCEPGWKGPNCTEPECPGDCQDQGRCVDGKCECFEGFGGDDCSVELCLLDCGDYGH
CVDGSCACEDGFIGEDCGQTNCLNNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCYDR
GRCVNGTCFCDEGFTGEDCGEITCPGNCNNRGMCVNGQCACQTGYTGEDCSKLTCPKNCN
ERGHCFNGKCICDPGFEGEDCSILSCPDNCNNRGQCINGECVCDAGYQGEDCSELSCPNN
CQDRGRCVDGLCICDKGYAGEDCSIKTCPKDCMGRGECVDGKCVCFVGFTGKDCGELTCP
NDCLDRGHCVNGQCVCHKGFTGEDCSEKTCPKNCLDRGYCVDGKCVCYEGFTGPDCSILT
CPDDCQDQGRCENGVCVCDEGFIGEDCSGVSPPKDLTVVEVTPETVDLTWENEMRVTEYL
ITYMPTAPGGLELDMQVPGDQKIATIRELEPGVEYMISVYAVLNNKRSVPVSARVATHLP
EPEGLKFKSVRETSVEVQWDPLDISFDGWNLIFRNTKEEDGEILNSLGRPETTFEQSGLG
PGQEYEVKLQVVKNNKLGKPASKNVITMIDAPSQVNVRDVTDTTALVTWFQPVAEVDGVS
IAYGPSSKPADRNVVELSSTDTQHHLGGLHPDTEYEVSLTARRGERTSAPVYESFLTDLD
APTDLQTVELTDESITLEWKNSRAHVENYRIKYGPLSGGEHGELLFPPGPKDSSQAKIIG
LRPGTEYGMGVTAVKDERESLPTTTNAVTALDAPKDLTVAEVTETTMMLEWKRPLAKLDS
YRLVYVSADGHRDEEVVPGSSESYTLRSLTPGMLYTISVTAERGRRTSAPTSISAPTEEE
KPVVTNVTVSDVSWDSFLLSWSAEDGAFQAFMIEVTDAETGAEWQNHTVPADARSLAVSG
LTPTTWYRANLYGQFRGALLDPVFADTITEAEPVVQALLVSDITPESFRLSWTAEEDSFD
TFVVMVSEAEDPGQPRELVLSGDERSTAVLELTEDTEYKVEVFGLIVGRRSMSVREQVRT
DLGPPKAIRFSDVTDTSATVHWVVPRARVDSYRVTFVPAHGGTAKTLTVDGSESHTVLPN
LTPGVTYEVTVVALKGQRESEPGSDSVTTALDKPRGLTAVNITDTVALLLWQPAIATVDG
YVITYSADSVAPVMERVSGNVVEFEMSSLTPATLYTVKVYAVRDLAKSAATTTVFTTDVD
APQDLAASNIQTENGLLTWKPPRADITGYILSFESADGMVREVVLSPNAVSYNMAQLSAS
TEYSVKLQAIAGPKRSRVITTVFTTTGVLYRFPKDCSQALLNGDTTSDLYTIYLGGDESQ
PIQVYCDMTTDGGGWIIFLRRQSGRLEFFRNWKNYTAGFGDMNDEFWLGLSNLHKITAGG
QYELRVDLRDKGETAYAQYDKFSISEPRTRYKVHVGGYSGSAGDSMTYHHGRPFSTYDHD
NDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRP
SNFRNLEGRRKRS
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgaagagcttgctcttaggctgcctgaccattggactgctgctcgagctctcc
aatgctggtctggtaaaaaagataatccgccaccgtagagaggctctaatccccaagaaa
acccaggagaacctcaccctaccccacccggaccagccggtagtatttaaccatgtctac
aacatcaacgtgcccacaacttccctctgcaccgtggacctcgactccccaggaggctct
gaagtcgaacacaagagcgctccaatggatatgcagaacactgagcacattgagcacaca
gaggatggagataatcagattgtttttacacaccgcatcagtatacccaagcaagcatgt
gggtgtgaaaaccagctgccagacatcaaggatatcctgaacaggctggagatgctggag
tcggagctgtctagtctgagagagcagtgcagcagtgggtccagctgctgtggggctcca
gttacaggtgaagtgtccacaaagccgttctgtaatggccgcgggaactggagcacagac
acctgcagctgtgtatgtgaacctggatggaagggccccaactgcacagaacctgagtgc
cccggtgactgccaggaccagggccgctgtgtggatggcaaatgcgagtgcttcgagggc
tttggtggggacgactgcagtgtcgagctctgcctgctggactgcggtgactatggccac
tgtgttgacgggtcctgcgcctgtgaggatggcttcattggggaagactgcggccagacc
aactgcctcaacaactgcctgggccgcggacgctgtgtggacgatgagtgtgtttgtgac
gagccttggacaggttttgactgctcagaactcatctgtcccaacgactgctatgaccgc
ggacgctgcgtcaacggaacctgtttctgtgacgagggcttcactggtgaagactgtgga
gagattacctgtcctggtaactgtaacaaccgtggcatgtgtgtgaatggccagtgtgcg
tgtcaaaccggctacactggagaggactgctcaaagctcacctgtcccaagaactgcaat
gagaggggccattgcttcaatggaaagtgtatctgtgatccaggatttgagggtgaagat
tgctctatactctcctgccctgacaactgcaacaataggggccagtgcataaatggagaa
tgtgtatgcgatgcaggataccaaggtgaagactgcagtgagctctcctgccctaacaac
tgccaagatcgcggtcgctgtgttgacggactgtgcatatgtgacaaaggctatgctggg
gaggactgtagcatcaagacctgtcccaaagattgcatgggacgcggggagtgcgttgat
ggcaagtgtgtatgcttcgttggattcactgggaaggactgtggtgagttgacctgcccc
aatgactgcctggaccgcggtcattgtgtgaatggacagtgtgtatgtcacaaaggtttc
accggtgaggactgcagtgagaagacgtgtcccaagaactgtcttgatagaggttactgt
gtcgatggcaaatgtgtatgctatgaaggtttcactgggccggattgctccatactgacc
tgccccgacgactgccaggaccagggacgctgtgaaaatggggtgtgtgtttgcgatgag
ggcttcattggagaggactgctctggagtctcaccaccaaaggatctaacagttgtggag
gtaaccccggagaccgttgacttgacctgggagaatgagatgcgtgtgaccgagtatctg
atcacctacatgcccactgcccctggaggtctggagctggacatgcaggtgcctggagac
cagaagatagccactattcgggagcttgagcctggtgtggagtacatgatcagtgtctat
gctgtacttaacaacaagaggagtgttcctgtcagtgctagggtggctacacatctgcct
gagcctgagggactcaagtttaagtcggtgcgggagacatcagtagaggtgcagtgggac
ccattggacatttcctttgatggctggaacctcatcttcagaaacacaaaagaggaggat
ggtgagattcttaactccctgggccgtccagagaccacctttgagcagtcaggcctgggt
cctggccaggagtacgaggtcaaactgcaggtggtgaagaacaacaagcttggaaagcct
gcctccaagaacgtcatcacaatgatcgacgcccccagccaggtgaatgtgcgagatgtg
actgacaccacagcgctggtgacgtggttccagcccgttgcggaggtggatggggtcagc
attgcatacgggcccagctctaaacctgctgatcgtaacgtggtggaactgtcatcaact
gacacccagcaccacctgggtggcctccaccctgacaccgagtatgaggtgtctctgacc
gctcgtagaggagagcggaccagcgcgcctgtctatgaatctttcctcacagaccttgat
gctcccaccgacctgcagacagtggagctgacggacgagagcatcaccctggagtggaag
aacagccgggcccacgtagaaaactaccgcataaagtatggccctctgtcaggaggcgag
catggagagctgcttttcccaccaggtccaaaggacagcagccaggccaaaatcataggc
ttgagacctggtactgagtacgggatgggtgtgacagcggtgaaggatgagcgggaaagt
ctgccgaccaccaccaacgcagtgactgccctggatgctcccaaggacctgactgttgca
gaggtgacagagaccaccatgatgctggagtggaagcgcccactagccaaactggactcc
tacagattggtttatgtatcagctgatggccacagagatgaggaggtggtccccggcagc
tccgagtcttacaccctgagaagcctgacacccggcatgctgtacacaatcagcgtcact
gctgagaggggccgcaggaccagtgcacccacctcaatctcagcccccacagaggaggag
aagcctgtggtgaccaatgtcaccgtcagcgatgtgtcgtgggacagcttcctcctgtcc
tggtctgcagaggatggggctttccaagcctttatgatcgaggttaccgacgcagagacg
ggcgccgagtggcaaaaccacacggtgcccgccgatgctcgcagcctcgccgtctctggc
ctcacccccaccacctggtacagggccaatctgtacgggcagttcaggggggccctctta
gaccctgtgttcgcagacaccatcacagaggctgaaccagtggtgcaggctctcctagtc
tccgacatcaccccagagagctttaggctgtcctggacggctgaagaggactcctttgac
acttttgtcgtaatggtcagcgaggctgaggaccctggccaaccaagagagctggtgctg
agtggggatgagcgaagcacggccgtcctagaactcaccgaggacacagagtacaaagtg
gaagtctttgggctcattgtggggagacgctccatgtctgtaagggagcaggtcagaaca
gacctgggtccacccaaagccatccgcttctctgatgtcaccgacacatctgccaccgtg
cactgggtggtgccaagagctcgggtggacagctacagggtcacgtttgtgcccgctcat
ggaggtactgcaaagaccctgacagtggatgggtctgagtctcacactgtgctgcccaac
ctgacccccggggtcacctatgaggtcaccgtggttgctctcaagggtcagagggagagt
gagcctggatcagacagcgtcaccacagctcttgataagccccgtggtctgactgcagtc
aacatcacagacacagtagctctgctgctctggcagcctgccatcgccactgtggacgga
tacgtcatcacgtacagtgcagactcagtggctccagtgatggagcgtgtctcaggaaac
gtggtggagttcgaaatgagctctctgaccccggcaactctctacaccgttaaggtctat
gctgtgagggacttggccaagagtgcagccactacaactgtgtttaccactgatgtggac
gcccctcaggacctggcagccagtaacatccagactgagaacggcttgctgacctggaag
cctccccgcgctgacatcacaggatacatcctcagcttcgagtctgcagacggcatggtc
cgggaggtggtcctgagtcccaatgctgtctcctataacatggcgcagctcagcgcatcc
acagagtactcagtcaagctgcaggccatcgcaggtccaaagagaagcagagtcatcacg
actgtcttcaccaccactggcgtgctctacagattccctaaggactgctcccaggccctg
ctgaacggcgacaccacatcagacttgtacaccatctatctgggtggagatgagagccag
ccaatccaagtgtactgcgatatgaccactgatggaggtggatggatcattttcctcaga
cgccagagtggtagactggagtttttccgcaactggaagaattacaccgctggctttggt
gacatgaatgatgaattctggctgggtctgtccaacctgcataagataacagctggaggt
cagtatgagctgcgagtcgacctgagagataagggagaaacagcctacgctcagtatgac
aagttctccatctctgaacctcggacacgctacaaggtccatgtaggaggatacagtgga
tcagcaggcgactccatgacctaccatcacggccgtccgttctccacgtatgaccacgac
aacgacatcgccgtcaccaactgtgccctgtcctataagggagctttctggtataaaaac
tgccaccgtgtcaacctaatgggacgatatggagataacagtcacagcaagggtgtgaac
tggttccactggaaaggccacgagcactcgatcgagttcgctgagatgaagatcaggcca
tccaacttcagaaacctggagggcaggaggaaacgatcataa
DBGET
integrated database retrieval system
