Labrus mixtus (cuckoo wrasse): 132973832
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Entry
132973832 CDS
T10666
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04010
MAPK signaling pathway
lmix04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132973832 (cacna1ba)
04020 Calcium signaling pathway
132973832 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmix04040
]
132973832 (cacna1ba)
Ion channels [BR:
lmix04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132973832 (cacna1ba)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
132973832
NCBI-ProteinID:
XP_060893436
LinkDB
All DBs
Position
5:5546927..5698303
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AA seq
1908 aa
AA seq
DB search
MCDTTFPQVFLNSLTPFEYMILATIIANCIVLALEQHLPASDKTPMSERLDDTEPYFIGI
FCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDLRTLRAVRVLRPL
KLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGKFHRTCFRIDTGE
QAADFPCGLEAPARTCANGTVCKEYWIGPSFGITNFDNILFAVLTVFQCITMEGWVDILY
NANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQI
ERELTGYLEWICKAGRAHTHTQTHTHTHTHTHTHTHTHTHTHIKNAVGFNTSSSDYFELR
CFCVAEEVMLAEEDKNAEEKSLDGAWYKRKQHNSVLKRTKKSKNDLINAEEGEDHFTDIS
SVGEGSPFTRASLKSQKENSSYFRRKEKRIRFTIRRLVKSQSFYWTVLCLVGLNTLCVAI
VHYDQPDWLTYALYLAEFVFLGLFLAEMSMKMYGLGPQNYFHSSFNCFDFGVIIGSIFEV
IWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIV
VFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRG
GMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAINKKLAMQKAKEV
KEVSPMSVANISITASYVCTPVHHYLSKEQQKSMKTMSVWEQRANQLRRQNQASCEALYS
ELEPEERLRRSSALNIRPDMKTHLDRPLVVEPLDGPLVGGHQHHHHKPGMPEDAENAADP
PAVHHQSRRHHRHRDRARKREEANENGDTSKDGGHHVHHSRSKDHECSRGKEGKSERSHS
REGGRKHHHQSSMDDSGGGGGEREHRHHHSHRQAKGGNGTVNGGGRGERRSRHKDGRSCN
RDGDKNPRAENGERRRHRTHGSRGQSTAEGEESNEREKNHNHRFGDSEGESLTISPQQGS
DGTNQPPDQPEDSDNQKNVRRTGQSSIHIPPVTITSPPGETTVIQMNSMDCETMPMTERN
VEDQGPSGPKPILPYSSMFVFGQTNPVRRLCHYIVTLRYFEMSILVVIAMSSIALAAEDP
VWTNAPRNNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALV
AFAFSVFIDLILSLSLCPDRFEGASWVHNCVCVCSLTVSALHRGTKGKDISTIKSLRVLR
VLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDE
SKGLEKDCKGQFLDYDKDEVASMPREWRKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHS
VDATFEDKGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEK
NERACIDFAINAKPLTRYMPENTQSFQYRMWKFVVSPPFEYSIMIMIALNTVVLMMKFHG
APDFYETMLKNLNIVFTTLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTE
INDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAII
GMQVFGNIELNEDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRVCDEKSGS
QGKQCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWA
EYDPAACGRISYKDMYNLLRIISPPLGLGKNCPNRVAYKRLVKMNMPIAEDTTVHFTSTL
MALIRTALEIKLASGMLAQRLSDEELKKELSTVWPSLSQKTMDLLVTPHKPNELTVGKVY
AALMIFDYYKQNRAKRLQLLQQQQQQGMSGSQHGAIRLSSTVQGRGSV
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacacaacctttccacaagtattccttaactctctcactccatttgagtacatg
atcctggccaccattattgcaaactgcatcgtgctggccttggagcaacacctaccggcc
tcagacaaaacaccgatgtcagagcgtttggacgacacagagccctactttattggaata
ttttgttttgaggctggcatcaagatcatcgctctgggctttgcctttcacaaaggctcc
tacctgcgtaatggctggaatgtaatggactttgtggtggtcctaacagggatcctggcc
actgtgggggcagattttgatctacgaacgctgcgggccgtgagagtactacgaccactc
aaactggtctctggcattccaagtcttcaagtagtgttgaagtccattatgaaagccatg
gtacctctgctgcagatcggcctgctgctcttcttcgccatcctcatgtttgccatcatt
ggcctggacttctacatgggcaagttccaccgcacctgcttcaggatcgacacgggtgag
caggcagctgatttcccctgtggtctggaggccccggccaggacctgcgctaacggcacc
gtctgtaaggagtactggatcggacccagcttcggcatcaccaactttgacaacatcctg
tttgccgttctcacagtgttccagtgcatcaccatggagggatgggtggacatcctctat
aacgccaatgatgcctctggaaacacgtggaactggctgtacttcatccccctcatcatc
atcgggtccttcttcatgctcaacctggtcctgggtgtgctgtcaggggagtttgccaag
gagagagagcgggtggagaagaggcaggagttcctgaagctccgcagacagcagcagata
gagagagagttgactgggtacctggagtggatctgcaaagcaggtcgggcacacacacac
acacagacacacacacacacacacacacacacacacacacacacacacacacacacacac
acacatataaaaaatgcagttggttttaacacgagtagctctgactactttgaactcagg
tgtttttgtgttgcagaggaggtgatgctggctgaggaagacaagaacgcagaggagaaa
tctctggatggagcgtggtacaaaaggaaacaacacaactctgtgttgaaacggaccaag
aagagtaagaacgacctcatcaatgcagaggaaggagaggaccacttcactgacatctca
tctgttggcgaagggtctccgttcacccgggccagcttgaagagccaaaaagagaactcg
tcctacttcaggaggaaagagaagagaatccgcttcaccatccgccggctggtcaagtct
cagagtttctactggaccgttctgtgtctggttggcctgaacacgctgtgtgtggccatc
gtacactacgaccagccagattggctcacatatgcactatacctggccgagtttgtattc
ctcggcctgttcctggcagagatgtccatgaaaatgtacggccttggcccccagaactac
ttccactcctcctttaactgcttcgactttggggtgattattggcagtatttttgaggtg
atctgggctgctattaaacccggcgcttcatttgggatcagcgtcctgcgggctctgagg
ctgctcaggatcttcaaagtcaccaagtactggaactctctgaggaacctggtggtatct
ctgctcaactccatgaagtccatcatcagcctgctgttcctcctcttcctcttcatcgtg
gtcttcgctcttctgggcatgcagctgttcggtggccagtttaattttgaagacgaaacg
ccgacaaccaactttgacaccttccctgcggcgattctcaccgtcttccagatcctgact
ggggaggactggaacgcagtcatgtaccacgggatcgaatcgcaggggggcgtccgtggg
gggatgttctcctccatttatttcattgttcttactctctttggaaactacacactcctc
aacgtgttcttggccattgctgtcgataacctggctaatgcccaggagctcactaaggat
gaagaggagcaggaggaggccatcaataagaagcttgccatgcaaaaggccaaggaggta
aaggaggtcagccccatgtcggtggctaacatttccatcacagcgagttatgtctgcacc
cccgtccatcactacctgagtaaggagcagcagaagtcgatgaagacgatgtcggtgtgg
gagcagagggccaaccagctgaggaggcagaaccaggcgagctgtgaggcgctctacagc
gagctggagcctgaggagcgtctccgccggtcctccgccctcaacatccggccagacatg
aagacccacctggaccgcccgctggttgttgaacctctcgacgggcctttggtggggggc
caccagcaccaccatcacaaaccgggcatgccggaagacgccgagaatgctgctgatcct
cctgctgtgcaccaccagtctcgccgccaccaccgccacagagaccgggccagaaagaga
gaggaagccaacgaaaacggggacaccagtaaggacggggggcaccacgtccatcacagc
cgctccaaagaccacgagtgtagcagaggcaaagaggggaagagcgagaggtcccacagc
cgagagggaggcagaaagcatcaccatcagagctcgatggacgacagcggaggaggagga
ggtgagagggagcaccgtcatcatcactcgcaccgtcaggccaaagggggcaacgggact
gtgaacggtggagggaggggggagcgcagatcgagacacaaagacggacgctcgtgtaac
agggacggggataagaatccccgagcagagaacggagagaggaggagacatcggactcat
ggatccagaggtcagtccacagctgaaggagaggagtccaacgagagagagaagaaccac
aatcacaggtttggagactcagagggggagtccctcaccatctccccccagcagggctct
gatgggaccaaccagcctcctgaccaaccagaggactcagacaaccagaagaatgtcaga
cggactggacaatcctccatccacatccctcctgtcaccatcacctccccacctggagag
acaaccgtcatacaaatgaacagtatggactgtgagacgatgccaatgactgagaggaac
gtggaggatcaaggtccaagtggaccaaaacccatcctgccttacagctccatgtttgtc
tttggacagaccaacccggtgaggcgtctatgtcactacatagtgactctgcgttatttt
gagatgtccatcctggtcgtcattgcaatgagcagcatcgctctggcagcagaggaccct
gtgtggaccaacgcccctcgcaacaatgtgctcaaatatctggattatgccttcactggt
gttttcacttttgaaatggtgatcaagatggtggacctcggcctgctgcttcatcctgga
gcttacttcagagacctgtggaacatcctggacttcatagtggtcagtggggcgctggtg
gcttttgcattttctgtgtttattgacctgatcctctccctgtctctgtgcccggatcgt
tttgaaggagcttcatgggtacataactgtgtttgtgtgtgttctctaactgtgtctgct
ctccacagggggaccaaaggcaaagacatcagcaccatcaagtctctgagggttctccgt
gtcctccggcctctcaagaccatcaaacgtctgcccaaactcaaggccgtcttcgactgt
gtggtcaactctctgaagaacgtgctgaacatcctcatcgtctacatcctcttcatgttc
atcttcgccgtcattgctgttcagctcttcaaggggaagttcttctactgcaccgacgag
tccaagggtctggagaaggactgcaaaggacagttcctggactatgacaaagacgaggtg
gcgtccatgcccagagagtggaggaaatatgagttccattatgacaacgtgctgtgggcc
ttcctgacgctcttcaccgtctccaccggggagggctggccaacagttttgaagcactct
gtggacgccacctttgaagacaagggtcccagtccaggctaccggatagagatgtcaatc
ttctatgtggtctactttgtggtcttccctttcttcttcgtcaacatcttcgtcgctctg
atcatcatcaccttccaggagcagggagacaaggcgatgtctgagtgcagcttggaaaag
aacgagagggcttgtatcgactttgccataaacgccaaacctctgacgcgctacatgccc
gagaacacgcagtccttccagtacaggatgtggaagtttgtagtctcacctccgtttgag
tactccatcatgatcatgatcgctctcaacactgtagtcctaatgatgaagtttcatgga
gctccagacttctatgaaacgatgctgaaaaacctcaacatagtcttcaccactctcttc
tctctggagtgtatcctcaagattatagcttttggtccattgaactacctgaaggacgcc
tggaacgtgtttgactttgtgactgtgttgggcagcatcactgacatcctggtgactgaa
atcaatgaccgactgctgaacctgagcttcctgaggttgttcagagccgctcggctcatc
aagctgctgaggcagggctacaccatccgcatcctgctgtggaccttcgtccagtccttt
aaggccctaccttatgtctgcctgctgattgctatgctgttcttcatctatgccatcatt
gggatgcaggtgtttggcaacattgagctgaatgaagacacagcaatcaatcaccacaac
aacttccgcactttcctccaagctctcatgctgctgttcaggagtgcaactggcgaggcc
tggcatgagatcatgttatcgtgtttgagtcatcgagtctgtgacgagaagtcggggtcc
caggggaaacagtgtggaagtgattttgcctacttctactttgtctcctttatcttcctc
tgctccttcctgatgctgaacctgtttgtggctgtcataatggataactttgagtaccta
accagagactcctccatcctggggcctcatcacctcgatgagttcatccgggtttgggct
gagtacgacccagctgcatgcggacggatttcctataaggatatgtacaatttgttacga
attatctcacccccccttggcttagggaagaactgccctaatagggtagcatacaagcgc
ctcgtcaaaatgaacatgccgatcgctgaggacaccacggtccacttcacctccaccctg
atggccctgatccgcaccgccctggagatcaaactggcttcaggcatgcttgctcagcgg
ttatctgacgaggagttaaagaaggagctgtccacagtgtggcccagcctctctcagaag
accatggacctgctggtgacgccacataaacccaatgagctgacagtggggaaggtttat
gcggctctcatgatctttgattactacaagcagaaccgagcaaagaggctgcagctgctg
cagcagcagcaacaacagggcatgtcaggctcccagcatggtgccatccgtctctcctcc
acagtgcaaggtcggggctctgtttaa
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