Labrus mixtus (cuckoo wrasse): 132973840
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Entry
132973840 CDS
T10666
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03440
Homologous recombination
lmix03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132973840 (top3b)
03460 Fanconi anemia pathway
132973840 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmix03032
]
132973840 (top3b)
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132973840 (top3b)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
132973840 (top3b)
DNA replication proteins [BR:
lmix03032
]
Eukaryotic type
DNA Topoisomerases
132973840 (top3b)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
132973840 (top3b)
FA (Fanconi anemia) pathway
132973840 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
132973840
NCBI-ProteinID:
XP_060893449
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Position
5:complement(6223453..6243826)
Genome browser
AA seq
854 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCTSRKGLNGACSVHEYTGSFEGQPVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPGELFSKAPTEKKEANPKLNMVKFLQVEGRGCDYVVLWLDCDK
EGENICFEVLDAIEPVMNKGSVRGQSVYRAKFSSITDTDIWNAMNRLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVVQVKVFKGKDTPLTLDWDRVRVFDRDVGQMFVNMTKTSKEAKVESVSKKEKAKQRPQA
LNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLKQQSNN
HMWAEEVKALLSAGLNRPRKGSDAGDHPPITPMRSASEAELGSDGWRLYEYITRHFIATV
SQDCKYLQTTIDFSIGTEAFSCSGKTLISAGFTELMPWQGIPLEEAMPPCERGDIFTVDE
IKLVEKQTHPPDYLTEAELITLMEKHGIGTDASIPVHINNVCQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRSAVEKQLNLIAQGKANYQQVLQHTLDIFKRKFHYFVDSI
PSMDELMEVSFSPIAASGKPLSRCGKCRRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGPRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECEGGVLVLDPTSGPKWRMACNKCNVVVNFFEHAHRVQVAQESCDACEASLVA
VDFNKTRTPLPAGETQHTGCVFCDPIFQDLVELKHATMRHRGGGARRGRGRGRGRRGNPK
KPKDKMAALAAYFV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagtcctgatggtggcagagaaaccatcgctggctcagtcgattgccaaaatc
ctctctaaaggaagctgtaccagtcgcaaaggcctcaacggagcatgctcagtgcacgag
tacaccggcagctttgagggccagcctgtgcgctttaagatgacttcagtgtgtggacac
gtgatgagtctggatttcatcggaaagtacaacaactgggacaaagtggaccctggagaa
ctcttcagcaaagctccaaccgagaagaaggaggcgaacccaaaactcaacatggtcaag
ttcctccaggttgaaggcagaggctgtgactatgtggttctatggctggattgtgacaag
gaaggagagaatatctgttttgaggtgttggatgccatcgagcctgtgatgaacaaaggc
agtgtgagggggcagagtgtttaccgagccaaattcagctccatcacagacacggacatc
tggaacgccatgaaccgcctgggagagcccaaccgcaatgaagctctgtcagtggacgct
cgtcaggagctggatctgcgaatcggctgtgccttcacacggttccagacgaagtatttc
cagggcaaatacggcaatctggactcctcgctgatctcatttggaccgtgtcagaccccg
actctgggcttctgtgtggaacgtcacgacaagatccagtccttcaaaccagagacctac
tgggtcgtccaggtgaaggtgttcaaaggaaaagacaccccgctgacactggactgggac
agggtgagggtctttgacagggatgtgggtcaaatgttcgtcaacatgaccaagacatcc
aaagaagccaaggtggagtctgtgagtaagaaggagaaggccaagcagagacctcaggct
ctgaacacagtggagatgttgagagtggccagctctgctttaggtatgggccctcagcac
accatgcagattgcagagcgcctgtacacgcagggctacatcagctaccctcgaactgag
accacccactaccccgagaacttcgacctgaaggggacgctgaagcagcagagcaacaac
cacatgtgggcagaggaggtgaaggctctgctttcagccgggttaaaccgacccaggaaa
ggaagcgatgctggagatcatccacccatcactcccatgcgttcagcttcagaagcagag
ctcggaagcgatggctggcggctgtacgagtacatcacacgccatttcatcgccacggtc
agccaggactgcaaatacctccagaccaccatagacttcagcatcggcacagaggccttc
tcatgtagcggcaaaactctgatatcagcaggtttcacagagttgatgccgtggcagggc
atccctctggaagaggccatgccaccgtgtgagcgaggagacattttcactgtggatgag
atcaaactggtggagaagcagacgcacccccccgactacctgacggaggctgagctcatc
acgctcatggagaaacacggcatcggaactgatgccagcatcccggtccacatcaacaac
gtgtgccagaggaactatgtgactgtagagaacggacgcaagctaaagccgaccaacctg
ggtatcgtcctggtacatggctactacaagacggatgcagagctggtgctgcccaccatc
cgcagtgctgtggagaagcagctgaacctgatcgctcagggtaaagcaaactatcagcag
gtcctgcagcacactctcgatatcttcaagaggaagtttcactactttgtcgactccatc
ccgagtatggacgagttgatggaggtctccttttcacctatcgctgccagtgggaagccc
ctgtcccgctgtggaaagtgccgtcgcttcatgaagtacatccaggccaagcccagccgg
ctccactgctcgcactgtgatgagacctacagtcttcctcagaacggagccatcaagctg
tacaaggagctccgctgtcccctggatgaatttgagctggtgctgtggacctcagggcct
cgagggaagagctaccccctgtgtccttactgcttcagcaacccgcctttcagggacatg
aagaaaggtatgggatgtaatgaatgcacccatccgtcctgtcagcactctctgaactct
ctgggcatcggtcagtgtgtggagtgtgaaggtggcgttctggtgctggaccccacctct
ggacccaaatggaggatggcctgtaataaatgcaacgtggtggtgaacttctttgaacat
gcacacagagtgcaggttgcacaggagagctgcgacgcctgcgaggcctctctggtcgcc
gtggacttcaataagactcgcactcctcttcctgcaggagaaacccaacacaccggctgt
gttttctgtgatccgatcttccaggatttggtggagctcaaacatgccaccatgaggcac
cggggcgggggtgcgaggagaggacggggacgtggccgaggacgccgtggcaatcctaaa
aaacccaaagacaaaatggccgcactggcagcttacttcgtataa
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