Labrus mixtus (cuckoo wrasse): 132973860
Help
Entry
132973860 CDS
T10666
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132973860 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmix04121
]
132973860 (si:dkey-3h3.3)
Enzymes [BR:
lmix01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132973860 (si:dkey-3h3.3)
Ubiquitin system [BR:
lmix04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132973860 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
DUF1388
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf-RING_5
DUF1272
zf-RING_10
DZR_2
zf-C3HC4_4
zf-RING_11
KH_DTX3L
DDHD
SRP-alpha_N
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
132973860
NCBI-ProteinID:
XP_060893477
LinkDB
All DBs
Position
5:complement(6782555..6794742)
Genome browser
AA seq
492 aa
AA seq
DB search
MAFITDVSLLINEAAFKDPLRLEKVLQPYSPERKGYCYKVTGTFDQMLNLSVTLSTVRDQ
FSPQPHRPTDQEERPSAQLRSVEVSRDVMDYMGQRCAEQLKKITGDSFIMEKRPHASSSS
VWVTFKPCNVSTPPVRIDFIRQRFISLYQRTASDLQTTSVSRSYARRLQTRFPQLLFPQN
TEHSTQKVTVTGHFVHIAHLKEYLSETTASSSQSPENKWSSETKRPSETKRPSETKSPSE
TKRPSETKSPSEARSPSETKRPSETRSPSETKRPSETKHSSETKSPSETTSRRGLGPSPE
LSRDLEEQEPCPICMESIKSSEKESLKCKHSFCRDCLKKAFTYKPICPTCGALYGVLTGT
QPDGGTMKVTTAPSSLPGYERYGTVIINYYIPSGIQKKEHPNPGQPYEGASRTAYLPDST
EGRHILKLLQRAFGQRLIFTVGRSTTSGRNNTVTWNDIHHKTSTRGGPTNYGYPDPDYLS
RVRDELNVKGIE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagacgtctctctcctcatcaatgaagcagcttttaaagatcctctc
agattagagaaggttcttcagccttactcacctgagaggaaaggttactgctacaaagtg
acaggaacatttgatcagatgttgaacctttcagtgacactgtctacagtgagggatcaa
ttcagtcctcaaccacatagaccgactgatcaggaggagcgtccttcagctcagctcagg
tcggtggaagtgtcccgggatgtcatggactacatgggccaaaggtgtgcagaacagctg
aagaaaatcacgggggacagtttcatcatggaaaaacggcctcatgcatccagcagctca
gtgtgggtcacgttcaaaccctgcaatgtctccacccctccggttcgcatcgactttatc
agacagagattcatcagcctctatcagaggacagcctctgacctgcaaaccacctcagtg
agtcggagttacgcaagacgcctgcagacaagattcccacagctcctgtttccacaaaac
acagaacacagcacacagaaagtgactgtgactgggcattttgtgcatatcgcccatctc
aaggagtatctttcagaaacgacagccagctcgagccagagtccagagaacaaatggtca
tcagagaccaaacgtccatcagagaccaaacgtccatcagagaccaaaagtccatccgag
accaagcgtccatcagagaccaaaagtccatcagaagccagaagtccatcagagaccaaa
cgtccatcagagaccagaagtccatcagagaccaaacgtccatcagagacgaaacattca
tcagagaccaaaagtccatcagagacgacaagcaggagagggttaggtccttcacctgaa
ctcagcagagaccttgaagaacaagaaccctgtccgatctgtatggagtccataaaaagt
tcagaaaaagagtctctaaagtgcaaacactcattctgcagagactgtctgaaaaaagcc
ttcacctataaacccatatgtcccacatgtggagcactgtacggcgttttgacaggaact
caacctgatggaggaaccatgaaggtaaccacagccccttcatccctgcctgggtacgag
agatacgggacagtcatcatcaactattacatccccagtggcatccaaaagaaggagcat
ccgaaccctgggcaaccgtatgaaggcgcatcccgcacagcgtacctgccagacagcact
gagggcagacacatcctgaagctcctgcaacgagccttcggtcagaggctcatcttcacc
gtcggtcgatccacgaccagcggcaggaacaacacggtcacgtggaacgacattcaccac
aaaacgtccacacgtggaggaccgacgaattatggatatccagatccagattatctcagc
agagtccgagatgaactgaacgtcaaagggattgaatga
DBGET
integrated database retrieval system
