Labrus mixtus (cuckoo wrasse): 132974337
Help
Entry
132974337 CDS
T10666
Symbol
dhx38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03040
Spliceosome
Brite
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132974337 (dhx38)
Spliceosome [BR:
lmix03041
]
Complex C
Other components
Step II factors
132974337 (dhx38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132974337
NCBI-ProteinID:
XP_060894328
LinkDB
All DBs
Position
1:21485835..21502515
Genome browser
AA seq
1265 aa
AA seq
DB search
MDDDDVSMHRLEGMDPTAQVGGLIVKKKSAAAEPHVFRAPTPRTSLLGLDLLAAQKRKER
ESKEQSDGSGDDRNTKRSKVSSFKDWEEAKSDSGSDEEDEEDDDEKKQNTKKESLPSRKY
RVTGSETPSNPGGVSEEFRRRHQQREKDRREHGVYASSKEDKNRDRDRDRERSRDKGRDR
KSEKDEREGSRSRGSSSSRSERGERSERSQREGWSDRISRGTKRDEPQSPQHRPRDAFTP
SHSNWEEDDSGYSSSRHSHWESPSPVLSHRESDRSERSHRSGQESERRDRSVRGRYPDDT
PLPTPSYKYNEWANDRKHLGSTPRLSQGKGRKEDGEGGIMFDNESEKDQWQEDQKQADRD
WYMMDEGYDEFHNPFTTTSEEYVKKREQILQKQTQKRISAQKRQINEDNERWETNRMLTS
GVVQRLEVDEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDMAIISR
KGSQLVRKHREQKERKKAQHKHWELAGTKLGDIMGIKKTEEADTSGGQPVGEDGKVDYRA
EQKFADHMKDKSEASSEFAKKKTLLEQRQYLPIFAVRQQLLNIIRDNSIVIVVGETGSGK
TTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEIGTNLGEEVGYAIRFEDCTSE
KTLIKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRTDLKLI
VTSATMDSDKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGLMG
DILIFMPGQEDIEVTSDQIIERLEDLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKC
IVATNIAETSLTVDGIMFVVDAGYCKLKVFNPRIGMDALQVYPISQANANQRSGRAGRTG
PGQCYRLYTQSAYKNEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLMFHFMDPPPEDNML
NSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMGCSADILIIVSMLSVP
AIFYRPKGREEESDQVREKFSVPESDHLTYLNVYMQWKNNNYSSVWCNEHFIHTKAMRKV
REVRSQLKDIMVQQRMNLISCGSDWDIIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHL
HPTSSLFGMGYTPDYIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGRSRQEN
RRRAKEEITNMEEEMSMAEEQLRSRRDEQEKKNNTCSVKAVKICTPGRKEDAPMTPRHPS
ARFGL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatgatgtgtccatgcacaggctggaagggatggatccaacggctcaagtt
ggcggactgatagttaagaagaagagcgctgctgcagagccccatgttttccgagcacct
actccacgcacctccttgctcggcttggatctgctggctgctcagaaaaggaaggagcgt
gagagtaaggaacagtctgatggtagtggggatgacagaaatacaaagaggtccaaagtt
tcgtcctttaaggactgggaggaagcaaaaagtgactctgggtctgatgaagaagacgaa
gaagatgatgatgagaaaaaacaaaatactaagaaggagagtcttcccagcaggaagtat
cgtgtgaccggctcagagacgccctcaaaccccggaggtgtaagtgaagagttccgacgc
agacaccagcagagagagaaagacagacgagaacatggagtgtacgcctcgtccaaagag
gacaagaacagagacagagacagagacagagaaaggagcagagataaaggaagagaccga
aaaagtgaaaaggatgagcgcgagggcagccgtagccgtggcagtagcagcagtcggtcg
gagcgaggggagagaagcgaacgttcacagagagagggctggtccgatcgtatcagtcgg
gggacgaagagagatgaacctcagtcaccacagcatcgccccagagatgctttcacaccc
tcgcactcgaactgggaggaggatgacagcggctattccagttcaaggcactcccactgg
gagtctccgtctccagtcctctctcacagagagtcagatcgctctgaacgaagccatcgc
tccggacaagagagtgagagaagggacaggtcagtcagaggtcgttaccctgatgacaca
ccgctgcccaccccgtcatacaagtacaacgagtgggccaatgacaggaaacatttgggt
tctacacctcgtctatcgcaaggaaaaggtaggaaagaagatggcgagggaggaatcatg
tttgataatgagagcgagaaagaccagtggcaggaggatcagaagcaagctgacagagat
tggtacatgatggacgaaggctatgacgagttccacaaccctttcactaccacctctgaa
gaatatgtgaagaagagagagcagatcctccagaagcagactcagaaaagaatctctgcc
cagaaacgacagatcaacgaggataatgagcggtgggagaccaaccgcatgctgaccagt
ggtgtagtgcagaggctggaggtggatgaagactttgaggaggacaatgctgccaaggtt
cacctgctggttcacaacctggttccccccttcctggacggaagaatagtcttcactaag
cagccagagcctgtcatccctgtgaaagatgctacctctgacatggccatcatctctcgt
aaaggcagtcagcttgttcgaaaacatcgcgagcagaaagaacgcaagaaggcgcagcac
aaacactgggagctggcaggaactaagttaggggacatcatggggatcaagaagacagag
gaagcagacacctctgggggccaaccagtcggcgaggacggcaaagttgactacagagcg
gagcagaaatttgcagaccacatgaaagataagtctgaggctagcagtgaatttgctaag
aagaagactcttctggagcagagacagtaccttcctatttttgctgtcagacaacaactt
ctaaacatcataagggacaatagcatcgtgattgttgttggagagacgggcagtgggaag
accacccagctgactcagtacctgcacgaggacggctacacgagctatggcatggtgggt
tgtacccagccccgaagagtagcagccatgagcgtggccaagagagtcagtgaagagatc
ggcactaacttgggagaggaggtgggttatgcgattcgttttgaagactgcacgtctgag
aaaacattaattaagtacatgacggacggtatcctgctcagggagtctctgagggagtca
gacctggaccactacagtgctgttatcatggacgaggctcacgaacgctcactgaataca
gatgtgttgtttggcctgctacgtgaggttgtggctcgacgcactgatttaaaactcata
gtaacttctgcaactatggactcagacaagtttgctgcattctttggcaacgtacccata
ttccacatcccggggagaacgtttcccgtagacatcttgtttagcaagactcctcaggag
gactatgtggaggcagcagtgaagcaggccctgcagatccacctcagtggcttgatggga
gacattctcatattcatgcccgggcaggaggacattgaggtgacctccgatcagattata
gagcggttggaggacttggagaatgctcctgctctggcagtgctgcccatctactcacag
ctgccatctgatctccaagccaagatctttcaaaaggctccagacggtgtgaggaaatgc
attgttgctacaaacatcgctgagacctctctgactgtggatggaatcatgtttgttgtg
gacgcaggatactgcaaacttaaggttttcaatccgcgcatcggtatggacgctctacag
gtttatcccattagccaagctaatgccaaccagcgatctggtcgagcaggacgtacagga
ccagggcagtgttacagactctacactcagagcgcctataagaatgagatgctgactacg
accataccagagatccagaggaccaacctggctaacgtggtcctgctgctgaagtctctt
ggggttcaggatctgctcatgttccacttcatggaccctccacctgaggacaacatgctc
aactccatgtaccagctctggatcctgggagctttagacaacacaggtgctttgacacca
acaggacgcctgatggtggaatttccccttgacccggccctctccaagatgctgattgtg
tcctgcgatatgggctgcagtgctgacatccttattattgtctctatgctgtctgtgccg
gccatcttctacagacctaagggtcgtgaggaagagagcgaccaggtgagggagaagttc
tcggtcccagagagtgaccacctcacctacctcaacgtctacatgcagtggaagaacaac
aactactccagcgtgtggtgcaacgagcactttatccacacgaaggccatgcgcaaggtg
cgtgaggtgcgttcccaactaaaggacatcatggtgcagcagaggatgaacctgatttcc
tgcgggtcggactgggacatcatcagaaagtgcatctgtgctgcttacttccaccaggct
gccaagctcaagggcatcggtgaatatgtgaacgtgaggacaggcatgccatgtcacctc
catcctaccagctccctgtttggtatgggctacaccccggactacatcatctaccacgag
ctcgtcatgacgaccaaggagtacatgcagtgtgtgacggcagtggatggagagtggctg
gcagagctcggcccgatgttttacagcatcaaacatgcaggaagaagcagacaggagaac
cgtcgcagggccaaggaggagatcaccaacatggaggaggagatgtccatggctgaggag
cagctgcgatcgcgtcgagacgaacaggagaagaagaacaacacctgcagcgttaaggct
gtgaaaatctgcacaccagggaggaaagaagatgcccccatgacccccagacacccctcc
gcccgctttggactgtag
DBGET
integrated database retrieval system
