Labrus mixtus (cuckoo wrasse): 132974499
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Entry
132974499 CDS
T10666
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03410
Base excision repair
Brite
Enzymes [BR:
lmix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132974499 (polb)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
132974499 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
132974499 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
132974499
NCBI-ProteinID:
XP_060894574
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All DBs
Position
5:22262705..22271210
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AA seq
336 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTISKYPNKIKNGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRTEMEKMETLILEELKEIDPEYIGTICGS
YRRGAASSGDIDILLTHPDYTSETEKQPKLVHRVVEHFESIGFVTDTLSKGDTKFMGVCQ
LQQNDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGMAGEPLLVDSERDIFEYIHYKYREPKERSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagaaaggcacctcaggaatccctgaatgagggaataacagacttcctcgtc
gagctggccaattatgagaaaaacgtcaacagggcaatacacaagtacaatgcatacagg
aaagcagcatctaccatctcaaaatacccaaacaaaatcaaaaatggcgaggaagccaag
aaactggatggtgttggagctaaaatagcagaaaagattgatgaattcctacaaacaggc
aaactacggaaactggagaagattcgaaatgatgacaccagctcctccatcaacttcctc
accagggttactggaattggccctgctgctgcaaggaagttctttgaggaaggtgtgaag
acattagaagatctgaaaaagattgagcacaagcttaatcatcatcaacagatcggactc
aagtactttgaggaatttgagaaaagaattccacgaactgaaatggaaaagatggagacg
ctcattcttgaggagctgaaggaaattgatccagagtacatcggaacaatctgtggaagc
tacagaagaggcgctgcatcgagtggtgatattgatattttgctgacccaccccgactac
acctctgagaccgaaaaacagcctaagctcgtccacagagtggttgagcattttgagtcc
attgggtttgtgacagacactctgtccaaaggagacaccaagttcatgggagtctgccag
ctgcagcagaacgatgaggatgaagaagagtaccttcacagacgtattgatatcaggtta
attccaaaggaccagtactactgtggagttctgtatttcactggaagtgatatcttcaat
aaaaacatgagaactcatgctctggagaagggcttcactcttaatgagtacacaataaga
ccacttggagtcactggtatggcaggagagcctctgctggtggatagtgaaagagacatc
tttgaatacatccactacaagtacagggagccaaaagaacgcagcgagtga
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integrated database retrieval system
