Labrus mixtus (cuckoo wrasse): 132974711
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Entry
132974711 CDS
T10666
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132974711 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmix03041
]
132974711 (usp39)
Spliceosome [BR:
lmix03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
132974711 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
132974711
NCBI-ProteinID:
XP_060894943
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All DBs
Position
5:30809690..30818537
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AA seq
502 aa
AA seq
DB search
MMVSVKREREAEVEDDDDDRVAPKMSRGRVTEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANAVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDSVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLLP
EEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTE
KEYKTYKENFLKKFQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQVTEKHTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEA
YIQIWKRQGGDDDDDTNNHTGV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttctgtgaagcgagaaagggaggctgaggtggaggatgatgacgacgacaga
gttgcccctaaaatgagccgaggacgtgtaacagaagaccggagaagtcgtcactgtcct
tacctcgacaccataaacaggagtgtgctggactttgactttgagaaactctgctccatc
tccctctcccacatcaatgtctatgcctgccttatatgtgggaaatactttcaaggtcga
ggtcttaagtcccatgcttacactcacagtgtgcagtttactcatcacgtgttcctgaat
ctgcacactctcaagttctactgtctgcccgacaactacgagatcatcgactcttcactg
gaagacatcacgtatgtgctgaagccaactttcaccaagcagcacatcgcaggtctggat
aagcagggaaagctgtaccgagcatacgatggaacaacctacctgccgggcatcgtaggc
ctcaacaacatcaaagccaatgactacgccaacgccgtgttacaggctttttctaatgtt
ccaccgctgagaaactatttcctggaggaagaaaactacaggggcatccgcagaccgccg
ggggacatcatgttcctcttggtgcagaggttcggtgagctgatgcgcaaactttggaat
ccgagaaacttcaaggctcatgtgtcaccgcacgagatgctgcaggccgtggtgctgtgc
agcaagaagaacttccaaattaccaagcaaggagattctgtagacttcatgacgtggttc
ttgaacgctctgcatggcgctctgggaggcacaaagaaaaaaccttcaatcattacaaaa
gcgtttcaaggctctatgagaatcttctccaagaaacttccacacccagatttactacca
gaggagaaagaggcgctgctggtaacagaggagtaccaggagcagatgtctgagtccacc
tttctgtttctgaccctcgacctcccgacagctccactttacaaggacgagaaggagcag
ctgattatcccccaggtcccgctcttcaacatcctgggcaagttcaatggcaacacagag
aaggaatacaaaacctacaaagagaacttcctcaaaaagttccagctgaccaaactgcct
ccatacctcgtcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaagaac
cccaccattgttaacttccccatcacgaatgtcgaccttcgtgagtacttgacagaagaa
gctcaagttacagagaagcacacaacttatgacctagtcgccaacgtagtgcatgatggg
aaacccaccgagggagcgtacaggatacatgttcttcatcatgggaccgggaagtggtac
gagatgcaggacctgcaggtgaccgacatcctcccccagatgatcacactgtccgaagcc
tacatccagatctggaagagacaaggaggcgatgatgacgatgacacaaacaaccacacg
ggggtgtaa
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