Labrus mixtus (cuckoo wrasse): 132975172
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Entry
132975172 CDS
T10666
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132975172 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmix03400
]
132975172 (msh6)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
132975172 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
132975172
NCBI-ProteinID:
XP_060895526
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Position
6:3358604..3369333
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AA seq
1385 aa
AA seq
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MAKQSSLFNFFPKSPPPVSSKTKPGPSPTEADLPSSVKKSNSSPKEEAKQTPQQQQQQPA
KCNKPKSHSKSAKGGFNKLFGDKAPAAKHNSPTCPLHGGALVWTKLEGHPWWPCMVIPQP
LTGQQMRGKGRSQRIHVHFFDEPPTRGWVSTKYVKEYKGSNHSEAKSGGTFFSGKPVIRR
AMELADDALSDSLEKRLKMPLCMDPSDDEDDDEEMELDKSTLTDEELTDEDEYKNEDVKS
PKVSRRSSRANKDDGNKAKRRRIVLDSDSGSDDEFKPDQAASSSEDEEEEEVVSEEEEEE
EEEEKEESEADSPVKPVKRKRPAEKSSSSSSSTKAKTPSVPASTPKRAPAAVKVDTKSRL
SAFSAPETFESQEKGSGTSGGPTVWDHEKLEWLQDGRRKDGRRRRQSEEDYDPSSLYVPD
DFLNRVTPGMRRWWQLKSKMLDTVIFYKVGKFYELYHMDAVVGVNELGLTFMKGTWAHSG
FPEIGFARFSDGLVQKGYKVARVEQTETPEMMEARCKTLLRPTKFDKVVRREVCRIITRG
TQTYSVLDGAPSESQSKFLLSLKEKAEEESSGRCRTYGVCFVDTSVGYFHVGQFPDDRHC
SRLRTLIAHFAPAEVLFEKGNPSAETRKILKASLSSALQEGLNSGAQFWDAQKTLKTFSE
EDYFRETSGKDQEAGRSFLPPLVKKMTSESDSLGLTPKEGYELALSALGGCVFYLKKCLV
DRELLSMANFEEYVPVDVEMENAAGTASFFAQTRQRMVVDGVTLANLEIFQNGSGGLEGT
LLERLDTCCTPFGKRLLKQWLCAPLCNPASIKDRLDAVEDMMAAPGQAAEVSDLLKTLPD
LERLLSKIHSIGALKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISVLAPV
AEETRSSLLRQVVTRKTEKDGLFPDLSGELRRWETAFDHQKARTTGVISPKTGFDAEYDQ
ALTSIKRCERELQEYLDRQKKRLGFKNMAYWGTGRNRFQMEVHDSVSERNIPEEYEVKST
KKGWKRYVTKESERLFAELQGFEEKRDAALKDCMRRLFFNFDKNYKDWKTGVECMAVLDV
LLALSRYSQGGDGPMTRPQVVLPEGDDRAAPFLDLTGSRHPCVTKTFFGDDFIPNDVFIG
CPGGGEDDNARASCVLVTGPNMGGKSTLMRQCGLVIMLAQLGCYVPAESLRFSPVDRVFT
RLGASDRIMAGESTFFVELSETASILHHATKHSLVLLDELGRGTATYDGTAIASAVVKEL
AEKICCRTLFSTHYHSLVEDYANNSAVRLGHMACMVENECEDPSQETITFLYKFISGACP
KSYGFNAARLANLPEEVIQSGHRKAREFEKSTLSLRLFKKLCHFAEDATPGNTQFSSLVQ
MLHSV
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaaagctccctcttcaacttcttccccaagtctcctccgccggtctcctcc
aagacgaagccgggcccctctccgaccgaggcggacctgccttcctcggtgaagaaatcc
aactcgtctccgaaagaggaagctaaacagaccccgcagcagcagcagcagcagccagcc
aagtgcaacaaaccgaaaagtcactcgaagtccgctaaaggaggatttaacaaactgttt
ggagacaaagctcctgctgccaaacacaacagcccaacatgccctctacacggtggggct
ctcgtgtggaccaaactggaggggcacccctggtggccgtgcatggtcataccccaacct
ctgacagggcagcagatgaggggaaaggggcggagccagcggatccacgtccatttcttc
gatgagccgcccaccagaggatgggtcagcaccaaatatgtcaaagagtacaaaggctcc
aaccacagtgaggctaaatcaggcgggacgttcttcagcgggaagcctgtaatccgtcgg
gcgatggagctcgctgatgacgctctgtctgacagcctggaaaagagattaaagatgccg
ctctgcatggacccgtcggatgatgaagacgatgatgaagagatggagctcgacaagtca
accctgaccgatgaagagctcactgacgaggacgagtacaaaaacgaggacgtgaagtcc
cccaaggtcagccgccgttcgtcccgtgcaaataaagacgacggaaacaaggccaagcgc
cgtcgcatcgtcctcgactcggacagcggatccgatgacgaattcaaaccggatcaggcg
gcgtccagcagtgaggacgaggaggaggaagaggtggttagtgaagaagaagaagaagaa
gaagaagaagagaaggaggagtcagaagcagatagtcctgtgaagccggtgaagcgcaaa
cgtcctgcagagaagtcttcttcttcttcttcttccactaaagcgaagacgccgtccgtc
ccggccagcacgcccaaacgagctcccgcagccgtgaaagtcgacacaaaatctcgcctg
tccgccttctccgctcccgagaccttcgagagccaggagaagggatcagggacgagcggc
ggtccgaccgtttgggaccacgagaagctggagtggttgcaggacggcaggaggaaagac
gggcgcaggcggagacagtcggaggaggattacgatcccagcagcctctacgtgcccgac
gacttcctgaacagggtcacgcccgggatgcggcgctggtggcagctcaaatccaagatg
ctcgacacggtcatcttctacaaggtggggaagttctacgagctctaccacatggacgcc
gtggtcggagtcaacgagctggggctgacgttcatgaagggaacctgggcgcactccggc
ttcccagagatcggcttcgcccgtttctccgacggcctcgtccaaaagggctacaaggtg
gcgcgcgtggagcagacggagacgccggagatgatggaagcccgctgcaagaccttattg
aggcccacgaagttcgacaaggtcgtgcggagagaggtctgccgcatcatcacgcgggga
acgcagacgtacagcgtgctggacggcgctccctcggagagccagagcaagttcctgctg
agtctgaaggagaaggccgaggaggagagctccgggcgctgccgcacctacggcgtctgc
ttcgtcgacacctccgtcggttacttccacgtcggtcagttcccggacgaccgccactgc
tcgcgtctgcgcacgctgatcgctcacttcgcgcccgccgaggtgctctttgaaaagggg
aacccgtccgccgaaacgaggaagatactcaaagcgtctctgtcgtcggcgctccaggaa
ggactgaactcaggcgctcagttctgggacgcgcagaagactcttaaaaccttctcggaa
gaggattacttcagagagacttctgggaaggatcaggaagcgggaagaagttttctccct
cctctcgtaaaaaagatgacgtctgagagcgactctctgggcctgactcccaaagagggc
tacgagctcgctctgtcggcgctgggcgggtgcgtcttctacctgaagaaatgtctggtg
gatcgagagctgctctccatggccaactttgaagagtacgtccccgttgacgtcgagatg
gagaacgccgcggggacggccagtttcttcgctcagactcgtcagcgcatggtcgtcgac
ggggtgaccctggccaacttggaaatcttccagaacggctcaggaggactggaggggacc
ctgctggagaggttggacacctgctgcaccccgttcggcaagaggctgttgaagcagtgg
ctctgcgcccccctgtgtaaccccgcctccataaaggaccgactggacgccgtggaggat
atgatggccgctccgggtcaggccgcagaggtttcagacctgctgaagacgctgccagac
ctggagcgtctcctgagtaagatccacagcatcggcgctctgaaggggcaggatcacccc
gacagccgggccgttctctacgaggaggtcacctacagcaaacgcaagatagcggacttc
ctgtcggcgctggaaggcttcaaaaccatgcaggagatcatttccgtgctcgctccggtc
gcggaggagacccggtcctcgctgctccgccaggttgtgactcggaaaaccgaaaaggac
ggcctctttcccgacctctccggcgagctcaggcgctgggagaccgccttcgaccaccag
aaagcgcgcacgacaggcgtcataagcccgaaaaccggcttcgacgccgagtacgaccag
gctctgacctcgatcaaacgctgcgagcgcgagctgcaggagtacctggacagacagaag
aagagactcggcttcaaaaacatggcttactggggaaccgggcgaaaccgcttccagatg
gaggtgcacgacagcgtctcggagaggaatattcccgaggagtacgaggtgaagtccaca
aagaaaggctggaagcgttacgtgaccaaggagtcggagcggctgtttgcggagctgcag
ggattcgaggagaagagagacgccgccctgaaggactgcatgaggagactcttcttcaac
ttcgacaagaactacaaagactggaagaccggcgtggagtgcatggctgtgctcgacgtg
ctgctggctctgtcacgctacagtcagggtggagacgggccgatgaccaggccgcaggtg
gtgctccctgaaggcgatgaccgggcggcgcccttcctcgacctcactggatcccggcac
ccttgcgtcacaaagacctttttcggcgacgacttcatcccaaacgacgtcttcatcggc
tgtcccggaggcggcgaggacgacaacgctcgggcctcgtgtgtgctcgtcacggggccg
aacatgggcggaaagtcgactctcatgagacagtgtggactggtgatcatgctcgctcag
ctgggttgttatgttccagctgagagccttcgcttctcccccgtcgacagggtcttcact
cggctgggggcttcagatcggattatggcaggagagagcaccttctttgtggagctgagt
gagacggccagcatcctgcaccacgccaccaaacactccctcgtgctcctcgatgaatta
ggaaggggcacggccacatatgacggcacagcgatcgccagcgccgtggtgaaggagctc
gctgagaagatctgctgccgcacgctcttctcgactcattaccactcgctggtggaggac
tacgccaacaactccgccgtgcggctcggccacatggcgtgcatggtggagaacgagtgc
gaggacccgagtcaggagaccatcaccttcctctacaagttcatctccggcgcctgccct
aagagttacggcttcaacgccgccagactcgcaaacctccccgaggaggtcatccaatcg
gggcacaggaaggcccgcgagtttgaaaagagcaccctcagcctgcgcctcttcaagaag
ctgtgccactttgctgaagacgccacacccggaaacacacagttttcttcactggttcag
atgctgcacagcgtctag
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