Labrus mixtus (cuckoo wrasse): 132975438
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Entry
132975438 CDS
T10666
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132975438 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132975438 (dis3)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
132975438 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Dis3l2_C_term
Toxin_R_bind_C
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
132975438
NCBI-ProteinID:
XP_060895956
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All DBs
Position
6:11646372..11655207
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AA seq
951 aa
AA seq
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MLKSKTFIKKTRSGGVMKIVREHYLRDDIWCGSEVCTDCKQESTVLQGDACIESNLCSYP
HYLIPDTNVVLHQIDVLEDPVIRNVIILQTVLQEVRHRSAPVYKRLKDIIHEKEKHFYTF
TNEHHSETFIEREPGESANDRNDRAIRVATKWYSRHLKTSAPDAEGLKVVLLTNDNGNKQ
KAEESGLLVYKCEEYIKSLIANPELVDCLALSNDDKNEVTSSKVLFPEHLPLSRIQAGIK
SGTFLQGTFRASRDNYLEATVFVQGEGEDTTEVLIQGLQNLNRAVHQDVVAVQLLPRDQW
VAPSSVVLQDEGTAKDDDAEEEEEEKALRISAAEVSRKPTARIVGIIKRSWRPFCGMLNT
SQIKESTRHLFTPADRRIPRIRIETRQAATLAGQRIMVAIDGWPKHSRYPNGHFVRSLGG
AGDKETEQEVLLLEHDVPHQAFSQAVLSFLPKMPWCITPEDMMEREDLRHLTVCSVDPPG
CTDIDDALHCLELDNGNLEVGVHIADVSHFIRPGNAMDKEAANRGTTVYLCGKRIDMVPE
LLSSNLCSLRSNVERLAFSCIWEINHKAEILKTRFTKSVINSKASLTYAEAQMKIDDTSK
NDDITKSLRGLNKIAKILKRHRIEKGALTLSSLEVRFHIDSETHDPIDLQTKELMETNSM
VEEFMLLANISVAQKIYDEFPDCAMLRKHPAPPPSNYDILLKAAKSKEVEIHTDSAKALA
DSLDMARVDGFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAIGADSTYPDLMDKQKQSALSNNLNYRHKMSQYAQRASVAFHTQLFFKS
RGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDKKDKAAPNLIFDEEGPSLKVEQHTFH
IFDRVKVTISLDDSNIQHQKIRMSLIDPVIPGVSVPVPDVEPQAKKPKLDH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatctaaaaccttcattaagaagacccggtcgggcggggtgatgaagatagtg
cgtgagcattatctgagagatgatatttggtgtggaagcgaagtctgcacagactgcaaa
caggagtccacggtgctgcagggagacgcgtgtatcgagagcaacctgtgctcctatcca
cattatctgatccccgacaccaatgtggtactgcatcagattgacgtgctggaggatcct
gtgattcgtaacgtgatcatcctgcagacggtgctgcaggaggtccgccaccgcagtgca
ccggtctataaacgcctgaaggacatcatacatgagaaagagaagcacttttacaccttt
acgaatgaacaccacagcgagacgttcattgagcgcgaaccaggggagagcgccaatgac
cgcaatgatcgcgccatccgtgtcgcaaccaaatggtacagccggcacctgaagacgtcc
gcgcctgatgccgaggggctcaaggtggtcctcctgaccaatgacaacgggaacaagcag
aaggcggaggagagcggcctgctggtgtacaaatgtgaagaatacatcaagagtctgata
gcgaaccctgagcttgtggattgtctggctttgtccaatgatgacaagaatgaagtcacc
agcagtaaggtgctattccctgagcatctccctttgtccaggatccaagcaggaattaag
agtggcaccttcctccagggcaccttcagggccagcagggacaactatctggaggccaca
gtctttgtccagggagagggggaagacacaacagaggttctcatccagggtcttcagaat
ctcaatcgagcggttcaccaggatgtagttgcagtgcagctgttgccgcgtgatcagtgg
gtggcgccctcctcggtggtgctacaagacgaaggcacagcaaaggatgatgatgctgaa
gaagaagaagaagagaaggctttgcggatatctgcagctgaagtatcgaggaagcccaca
gccagaatcgtaggaatcatcaaacggagctggaggcccttttgcggcatgctcaatacc
tcccagattaaagagtctacccgccatctgttcaccccagcagaccgccgtatccctcgc
atacgcatcgaaacacgtcaggcagccacactggcaggccagaggatcatggtggccatc
gacggctggcccaaacactccagatatccaaacggtcactttgtgcgcagcctgggaggt
gcaggtgacaaagagactgagcaggaggttctgcttttggagcatgacgtcccccaccag
gccttctctcaggctgtgctcagtttccttcccaagatgccgtggtgcatcacaccagag
gacatgatggagagagaggacctgaggcatctgactgtgtgcagtgtggatcctccagga
tgtacagacatagacgatgctcttcactgtttagagctggacaacggaaaccttgaggtg
ggggtccacatcgctgatgtcagtcacttcatcagacctggcaacgctatggacaaagag
gctgcaaaccgaggcaccactgtctacctgtgtggaaaaaggatcgatatggttcctgag
ctactcagctccaacctttgctctctgcgctccaatgtggaaaggctggccttctcatgt
atctgggagattaaccacaaggctgaaattctaaagacccgcttcacaaaaagtgtcata
aactccaaggcatctctgacttatgcagaggcccagatgaagattgatgacaccagcaaa
aacgatgatatcaccaagagccttcgaggtctcaacaaaatagccaaaatcctcaaaagg
cacaggatagagaaaggggctttgacgctgtcatccttagaggtccgttttcacatagac
agtgaaacccacgaccccattgacctccagaccaaggaactcatggagacaaactccatg
gtggaggagttcatgttgctggcaaatatttcagtggcccagaagatctatgatgaattt
ccagattgtgctatgctgaggaaacatccggcaccacccccatcaaactacgacatcctg
ctcaaagctgcaaagtccaaggaagtggagatccacacagattcagcgaaggcactggcc
gactcccttgacatggccagagtggacggctttccgtactttaacacgctactgcgcatc
ctggccactcgctgcatgatgcaggcggtttatttttgttccggcatggacagcgacttc
caccactacggcctcgcctcgcccatttatacacacttcacgtcacctatcagaaggtac
gctgatataatagtacaccgcctgctggcagtggccatcggagcagacagcacctatcca
gatttgatggacaaacagaaacagtcagccctctccaacaacctcaactacaggcataaa
atgtctcagtatgcacagagggcgtctgtggccttccacacacagttgttcttcaagagc
agaggcatactgaacgaagagggatttgttctgtttgtgaggaagaacgcaatcatcgtg
ctcatcccaaagtttggcctggagggaacggtcttctttgacaaaaaagacaaggctgcc
ccaaacctcatttttgatgaagagggtcccagtctgaaggtggagcagcacaccttccac
atatttgacagggtgaaggtcaccatcagcctggacgattctaacattcagcaccagaag
atccgcatgtctctgattgacccagtgattcctggtgtgagcgttccagtcccagatgtt
gaaccacaggcaaagaaacccaaactggaccattga
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