Labrus mixtus (cuckoo wrasse): 132975701
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Entry
132975701 CDS
T10666
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04010
MAPK signaling pathway
lmix04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132975701 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
132975701 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmix03000
]
132975701 (nfkb2)
Transcription factors [BR:
lmix03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
132975701 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
132975701
NCBI-ProteinID:
XP_060896423
LinkDB
All DBs
Position
6:21347445..21370260
Genome browser
AA seq
906 aa
AA seq
DB search
MAGALRMTEAQYINVYDNDLHVNLMQYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHSDPPRVHAHSLV
GRHCTENGICTLDIGPNDLTASFSNLGILHVTKKGVVEVLSRRLREERRRQKGAHSLLTD
AEESSFLKEAKDLGKVMDLNIVRLKFTAYLQDSNGGFTRALKPVVSNPIYDSKSPNASNL
KISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGSWEAYGDFSPTDVHKQYAI
VFKTPPYHIAEIERPVTVFLQLKRKKAGDSSDPKPFTYIPQVQDKEEVLRKKQKPLPHCE
TGSWSGGGGGRGGGAGGYGGGGGGGGVFQFSQQMNGAGGGGGGGGGFFTGGFTGFGGGAQ
MSGSTPQTGVTQQQTTRQTGGQTGSPLQQQLFQIAAALHSRASQSARQTAAALLQYCSTG
DARVLLAIQKHLCGVQDGNGDTPLHLAIIHQQTGVIQQLIHTLLSSQQQNTLNTANHLRQ
TPLHLAVITRQVKVVEVLLRAGADPSLVDKDGRNPLHLAALAGDQNTLRPLLAHLGERHT
NLVNTPDYHGLHPLHLAVRREGERCLRLLVEGGAKINAPEQKSGNTALHLAVRENQFKVA
CTLITELKADVNACTFGGNTPLHMAASLGSPTLCSMLIAAGADKSVENDEPLHFSSSSDE
EHDEDEPIREEVKGREAASQPINPRKRPSGGHTPLDLARCQKVRNLLSSRQSPKPSRHSS
KKMKPSSSEEVEASGLDEETLSRLVDVLSIGDVSWMKLAEKLGMMTLTHLYLDSQAPCQQ
LLQHYKLGGGPVDGLVDALQSLGLTEGVRLLRNKELQDDKHSTDATVDSGFGSQPMEDEE
SPVTNQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctcaggatgactgaagctcagtacatcaacgtctacgacaatgatcta
catgtgaacctgatgcagtatgactacattcctccagtggacataaagacagaaccctac
atacctgagacagctcacggtccttacatccaaatcattgaggagccaaagcagaggggc
tttcgtttccgttatgagtgtgaaggtccctcccatggcgggctcccaggggcctcaagt
gagaagaacaggagaacttacccaacagtgaagattaataactatgtgggtcacgcccgg
gtggaggtccagttggtgacccactccgatcctcctcgggttcatgctcacagtctggtt
ggacgtcactgcactgagaacggcatctgcacgctggacatcggccccaacgacctcact
gcctccttcagtaacctggggatcctccatgtgacaaagaaaggggtggtggaggtcctg
agcaggaggctgagagaggagcgaaggagacagaaaggagctcacagtctcctcacagat
gcggaggagagctccttcctgaaggaggccaaggacctggggaaggtgatggacctgaat
atcgtcaggttaaagttcaccgcctacctgcaggacagcaacggaggtttcaccagagcg
ctaaaacctgtcgtctccaaccccatctacgacagcaaatcacccaacgcctccaacctg
aaaatctctcggatggataagacgtgtggctcggtgctcggaggagacgagatcttcctg
ctgtgtgacaaagtccagaaagatgacatagagatacgtttttatgaggaggatgatgag
ggaagctgggaggcctacggtgacttctcacccacagatgttcacaaacagtacgccatc
gtattcaaaaccccgccgtatcacattgcagagatcgagcggcccgtcaccgtcttcctg
caactgaagaggaaaaaggctggagacagcagcgacccgaaaccgttcacctacatacca
caggttcaagacaaagaggaggtgctgagaaagaagcagaaaccgctgcctcactgtgag
actggctcctggagtggaggaggaggaggaagagggggaggggctggaggatatggagga
ggaggaggaggagggggagtattccagttcagtcaacaaatgaatggagcaggaggagga
ggaggaggaggaggaggtttcttcactggaggcttcacaggctttggaggcggagctcag
atgtcaggctccacccctcagacaggcgttacccagcaacagacaaccagacagacagga
ggacagactggttcaccactacaacagcagctgtttcagattgctgcagccctccacagc
agagcctcacagagtgccagacagaccgctgctgccctactacagtactgcagcaccgga
gacgcccgggtccttttggcaatccagaaacacctctgtggcgtccaagatggcaacgga
gacactccattgcacctggccatcatccaccagcagacaggagtgattcagcaattgatc
cacactctgctcagcagccagcagcaaaacaccctcaacacagccaaccacctccgacag
actcctctccacctggcggtgattaccaggcaggtgaaggtggtggaggtgttgttgagg
gcaggggccgaccccagcctggtggacaaagatggccgtaatcctctccacctggcagcg
ctggccggagaccaaaacacacttcgccccctgcttgctcacctaggagaacgccacacc
aacctggtgaacacgcctgactaccacggtcttcatcctctccacctggcggtgaggagg
gaaggtgagcgctgcctccgtctgcttgtggagggtggagccaaaatcaacgctcctgaa
cagaaaagtggaaacactgccctccacctggctgtcagagaaaaccagttcaaggtggcc
tgcactctcatcacagagctgaaggcggatgttaacgcatgcacgtttggaggaaacacg
cctcttcacatggctgccagtctaggatctccgaccctctgctccatgctcatcgctgca
ggcgctgataagagcgtagagaatgatgagccgctccacttcagctcctcttcagacgaa
gagcatgacgaagatgaaccaattagagaggaggtcaaaggaagagaagctgcctcgcag
ccaatcaaccctcgcaagagaccttcaggaggacacacccctctggacctcgctagatgc
caaaaggtgaggaacctcttgagctccagacagagtccaaaaccaagtcgtcacagcagt
aagaagatgaaaccgagcagcagtgaagaggtcgaggcttcggggctggacgaggagact
ctatcccggctcgtggatgtgttgagtatcggagacgtttcgtggatgaaactggcggag
aaactggggatgatgacgctgactcacctgtacctggacagtcaggcaccgtgccaacaa
ctgctgcagcactacaagctgggtggaggtccagtcgacggtctggtggatgctcttcag
tccctcggtctgacagaaggagtacgactgctgagaaacaaagagctacaagacgacaaa
cacagcacagatgctacggttgacagcggctttggcagtcagccaatggaagatgaggag
tcacctgtgaccaatcagtga
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