Labrus mixtus (cuckoo wrasse): 132975786
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Entry
132975786 CDS
T10666
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132975786 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132975786 (vps8)
Membrane trafficking [BR:
lmix04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132975786 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Clathrin
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_11
PHD_4
Beta-prop_WDR5
zf-RING_UBOX
WDR55
Beta-prop_EML_2
zf-RING_2
zf-C3H2C3
Beta-prop_WDR3_1st
Beta-prop_HPS5
EIF3I
zf-RING_5
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
132975786
NCBI-ProteinID:
XP_060896556
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All DBs
Position
6:23182123..23230665
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AA seq
1406 aa
AA seq
DB search
MSESPDAHSLLSASSQLNLMEVDTIDDKEFDIPQVDTPPTLESILNELEDEEEPFLLEDT
SVLNTDNIDAYSCDTSSLASSDSGDPAHLKRKRRTQDFNAPVHGSVVRQSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALVFDNNQALRLCLGTKSTGAEFGAVSALSIN
HDCSRLLCGFAKGQIMMWDLANGKLLRTINDAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELVFRRVMGIRSCDSRCLFSGSKGEVCCIEPLRAPPDFRDHPITHYSLLAMASLTKILV
IGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPTQKTVNPVLAFCKGDTVHFLLVKKEDTG
TIHVIKQRQLNLICDIISLSWINNRTLVLVDSHEKLQVVDRPSQEVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSAHIMALRNWRERIDCLL
KHEHFVEALSLAWSFHEGTAKAVVGLYGDPVKKKGVVADKMVEIFFQFSEYSLKKCPDQG
KIQVMEQHFQDVVPVLVDYCLLLKRADLLFNQLYSQLAENMVAKGVFLESLESYIVADRL
GHLTTPIMRDLLAHYHSTGKMESLERCIVHLDVTNLDIQQVVQVCWENHLHDAMIYVFNR
GMNDYITPMEKLFAVIGPPLKYGRSLTDEEVVMGNKLLVYISCCLAGRAYPLGDIPEDLV
VQVKNQVFEFLIRLHSADSSEEEEVFPFIRSLIHFDTREFFNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNSDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLDFLCCPDD
DSRHSERQQVLLELLQVGGVIQYNEERLLALAEKAKFYQVCEFLYEKNSLYDRIFDCYLR
DPLRKEEIFSYIHNLLSMPGYSLKEKQTVMEKVLQHIQELITLDSSSSADLVLFHFPEEV
QQIISELQDDHLLMEFLSHLLKPREGHHSGTILPVEHELHELLLDLFCRLSPQQILKFLQ
TSQHYRLEEALQITEKYHHKEVSAYLLEKKGDFQGAFSVLLGLLKEKLSLLTTEIERGVN
GEDESLNEEKEDSKSTLTIVKDSLDNIIDLCNHSSENLYQQQREVLWFPLLETMMFSQKE
VKGLGSIHTFEVLRELTMKVLNCMSSFISLPAIIQRILQDPVYGTGKLAEIQGLILSMLD
TFNYEQTLLETTTSLLNQDLHWSLAHLHAAVTKGLHPRQDYCYICFQQYKRRQDSVEEII
VFSCGHLYHFQCLQQKDCEGAVCASEQQQSWSCYKCSSSQGGRGGPFTEPKRLPSTSLAQ
TCVTSVHHDAGSEAHGKKVFVEATLSLQQEQSWDQLSSLYRGPSRLSILSELSYYHSNEK
TGLIIPGQPGAENFQLKLSPPPLLEE
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctccggacgcacacagcctcctctctgcttcttctcagctcaacttgatg
gaggtggacacgattgatgataaggagttcgacattccccaagtggacacgcctcctaca
cttgaaagcatcctcaatgagctagaggatgaggaggagccatttctgttggaagacacc
agtgtactaaacacagacaacattgatgcatactcctgtgacacctcctctctcgccagc
tcggacagtggagacccagcacacctcaaaagaaagaggaggacacaggatttcaatgcg
ccagtccatgggtctgttgttcgtcaaagtctgctgaaggggatttccgcacagattgtc
tctgctgccgacaaggtggatgctggacttcccactgctataacagtgtccggtgtaatt
gctgtgggaacgtctcatggcctggctctagtctttgataacaaccaggctctgcggctc
tgtctgggtactaagtcaactggagctgagtttggagctgtctctgcactcagcatcaac
catgattgctcacgacttctttgtggatttgccaaaggacagattatgatgtgggatcta
gccaacgggaagttattaagaactatcaatgatgcccaccctccaggaacagcaatacta
catgtgaagttcacggatgacccaactcttgcagtgtgcaatgacagtggaggatcggtt
tttgagttggttttcaggagggtaatgggaattcgttcctgtgattcacgatgccttttc
agtggttctaaaggggaggtgtgctgtattgaaccattgcgtgctcctccagacttcagg
gaccatcctattacacattactctctgctggcaatggcctctctcacaaagattttggtt
attggactaaagccttctctaaaagtctggatgacctttccgtacagcaagtctgatcca
tccagtgttcctcagctggcctggcagtttgttcctactcagaagactgtcaaccctgta
ctggctttttgtaaaggggatactgtccacttcctcctggtaaagaaagaggacacgggt
accatccacgtcatcaaacaaagacaactcaacctcatttgtgacatcataagcttaagt
tggataaacaatcgcactctggtcctcgtagacagccatgagaagctgcaggttgtggac
cggcccagtcaggaggttttggagaccttggatttagagcaggttcaactggtctataac
agccggcatttcaaatccctggccactggagggaacgtgtcccaggctctggctttggtc
ggagaaaaggcctgctaccagtcagtctcaagctatgcggggcagattgtctatttgggc
accaagtctgctcacattatggccctaaggaactggagagagcgcatagactgtctgttg
aagcatgagcattttgttgaggccctctctttggcctggtccttccatgagggaacagct
aaggctgtggttggcctttatggagatccagtgaaaaagaagggagtggtagctgataag
atggtagagatctttttccagttttcagagtattccttaaagaagtgtccagaccaaggc
aagatccaagtaatggagcagcattttcaagatgtagttccagtcctggtggattactgc
ctgctgcttaaaagggccgacctgctgttcaaccagctgtattctcagctggcggagaac
atggttgccaagggtgtctttctggagtcattggagtcatacattgttgctgaccgcctt
ggtcacctcaccacacccatcatgagggacctcctagcccattaccatagcactggtaaa
atggaaagcctggagagatgcattgttcacctggacgtcaccaatctggatattcagcag
gtggttcaagtctgttgggagaaccatctccatgatgcaatgatctacgttttcaacagg
ggaatgaatgactacataacacctatggagaaactctttgcagtgattgggccaccactt
aagtatgggaggagcctaacagatgaggaagtggtgatggggaacaaacttctggtttac
ataagctgctgtcttgcaggcagggcatatccgctaggcgacatccctgaagaccttgta
gttcaagtcaagaaccaggtgtttgaattccttatccgtcttcactcagctgactcgtca
gaggaggaagaagttttcccatttattcgttcactcatccacttcgatacccgagaattc
tttaatgtccttgccatgacatttgaagacttcaagaatgacaagcaggccctagaatac
cagcagaggatcgtggacatcttgcttcaggtgatggtggacaactcagactttactcct
tcccaggtcggagggctcttcacctttttggctcgccagttagccaagccagataacaca
ctatttgtgaacaggaaactctttgatcaggttctagacttcctgtgttgcccagatgat
gactcccgacacagtgagaggcagcaggttctgctggagttgctccaggttgggggtgtc
atccagtataatgaggaaagactattggctttagcagaaaaggccaaattctatcaagtc
tgtgaatttctatatgagaagaacagtttgtatgacagaatttttgactgctacctgaga
gaccccctcagaaaggaggaaatcttcagctacatccataatctgttgtccatgcctggc
tacagtctcaaggagaaacaaactgtcatggaaaaagtattacaacacatacaggagctg
ataaccctggattcaagcagctccgccgacctagtgttgtttcacttccctgaagaggtg
cagcaaataatctctgagctccaggatgaccatttacttatggagttcctcagtcatctc
ctgaaaccaagggaaggtcatcattcagggaccatcctgccagtggaacatgagcttcat
gagcttctgctggacttgttttgccgcctttcccctcagcagatcctgaaattccttcag
acttcccagcactacagactggaggaggccttacaaataacagaaaagtaccaccacaaa
gaggtctcagcctatctgctggagaagaagggagattttcaaggagcgttttctgtcttg
ttggggttattgaaagaaaaactgagtctcctcacgactgagattgaaagaggagttaat
ggagaagatgaaagtctaaatgaagagaaggaagacagcaaatccacgctgacaatagta
aaggattctcttgacaacatcatagacttgtgtaatcatagctctgagaacctttaccag
caacaaagagaggtcctgtggtttccacttctggagacaatgatgttttcccagaaagaa
gtgaaggggcttggttctatacacacatttgaggtgctgagggagctgacgatgaaagtt
cttaactgcatgagcagctttatttctcttccggccatcatccaacggattctccaggac
cctgtttatgggacaggaaaactggcagaaatccaaggtctcatactgagtatgctggac
acttttaactacgaacagactctacttgaaacaaccaccagtctgttgaaccaggacctt
cactggtctctggctcacctgcatgctgcagtcacaaagggactccacccacgacaggac
tactgttacatatgcttccagcagtacaaaaggaggcaggactcagttgaggagatcatt
gtgtttagctgtggtcacctgtaccactttcagtgcctgcagcagaaggattgtgaaggg
gcggtctgtgcttcagagcagcaacagagttggagctgctacaaatgttcctccagccaa
ggaggaaggggtgggcctttcaccgaaccaaaaagacttcccagtacatccctggcacag
acttgtgttacatcagtgcatcatgatgcaggatcagaggctcacgggaaaaaggtgttt
gttgaggcaacgttgagccttcagcaggaacagtcctgggatcaattgagcagcttatat
agaggaccatccaggttgtccatcctttcagaactctcctactaccatagtaatgagaag
acagggctcattatcccaggccaaccaggagctgaaaacttccaacttaaactttctcct
ccgcctctgttggaagagtag
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integrated database retrieval system
