Entry |
|
Symbol |
cpne1
|
Name |
(RefSeq) copine-1 isoform X1
|
KO |
|
Organism |
lmix Labrus mixtus (cuckoo wrasse)
|
Brite |
KEGG Orthology (KO) [BR:lmix00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:lmix03041]
132976948 (cpne1)
Spliceosome [BR:lmix03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132976948 (cpne1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
7:complement(21449878..21476317)
|
AA seq |
901 aa
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETAAPTAGNVNRQAATPIPTVQS
GAGGRSGSHGNQGFGNTSASVTAASSSHEPPSIKTMASVVPSFPNSYSSAPTITTALASL
NAGPPPIPPLPSMPSMPPMPSLPTMPVPPPVSSLPPVPTVSQLSQGPPMPPMSHLQHMSS
MPPFNPSLPPPGGLGSGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAAAAAAGGASNPDE
LFVLLQNLPFSCSDVEVRAFFRGLGVDGVRLMRDGQGRPTGRAMVKFFSPQESFEAVKRG
GGMMGQRFIEITPGSERQWASLNDSATGLVIHNSSKSNNDQLDQQHRRGNTGSGTGSRDQ
RGRSRSPHRQEFCVYLKGLPYEADKKQIKEFFGNLAIIEDSVYIAYGPNGRATGEGFLEF
KTEQDYKTALGAHMQYMGTRFIQVHPIGRKGMLEKIDMIRKREAAQGDGKNQDGSKSPRN
CAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKAERL
HRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQNQNQNHLNQNQNQHQQAQPSPQ
QPHINPFAGIGDEFNFLRNTMGNLNSAPFVTPFSAPGNGLAGPPPLPPLAAGLGDVNLGV
APPLVAGLPGAPILEPPGFRPGAPGGSPFGQDGLRGLVPFENANRKGGGGGQNRGGGANN
NQGRPGGGAAAGQQVFAPGADGLRNQPNPGGSNNPNGQRGASGPTIVKLQNMPFTVTVDE
IMDFFYGYQVLPGSVCLQFSEKGLPTGEAMVAFQNHEEASAAVMDLNDRPIGARKVKISL
G |
NT seq |
2706 nt +upstreamnt +downstreamnt
atggctgtagtcatcaggctgcagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggcctcaccatccctgacggtggagtgcacattgtaggtggtgagcat
ggcgaagccttcatcgtctttgccactgatgaggatgctcggctggggatgatgcgtaca
ggcgggtccatcaagggctccaaagtgtcactgttgcttagcagcaagactgaaatgcag
aacatgattgagctcagtcgtcgaagatttgaggctggggcaggtgctgttgaaacagct
gcacctacagcaggaaatgtaaatcgtcaggcagccacccccatacctacagtacagtca
ggggctggggggagaagtggtagtcatggaaatcagggtttcggtaacacttccgcctca
gtaacagcagcaagctcatctcacgagccaccaagcatcaagacaatggccagcgtagtg
cctagcttccccaacagctacagctcggcccctacaatcaccacagcacttgcatcgctc
aatgcaggaccaccacctatccctccacttccaagcatgccttccatgcccccaatgccc
tcactacctactatgcctgttcctcctccagtgtcgtccctcccccctgtcccgactgtc
tcccaactgtcccagggaccgccaatgcctcctatgtcccatctccaacacatgtcctcc
atgcctccctttaacccttccctacctccaccaggtggtctaggctccggcctccctctt
ggaaccccaaacccaatgctatttaatcctctctctccccttgcctctcttggcctccag
gcccacatgaaggctgctgctgctgcggctgcagcaggtggagcaagcaatcctgatgag
ttgtttgtcctcctgcagaacctcccattctcctgctcagatgtagaggtcagagctttt
ttccggggtcttggggtggatggggttcgcctgatgagggacggacagggccggcctact
ggaagggctatggtcaagttcttctctccccaggaaagttttgaagctgtaaagcgtgga
gggggcatgatgggccaaaggtttattgagataaccccaggctctgaacgacaatgggca
agtctaaatgacagtgcaacaggtcttgttattcacaatagcagcaaatctaacaatgac
caactagaccagcagcaccgtcgtggtaatactgggtcagggacaggcagccgggatcag
cgaggaaggtctcgatctccacatcggcaggagttctgtgtctacctaaaaggccttccc
tacgaagcagacaagaaacagataaaagagttctttggcaatttagcaataatagaggac
agtgtctacatcgcttatgggccaaatggacgtgccacaggagagggcttccttgagttc
aaaacagaacaagactacaagactgctcttggtgctcacatgcaatatatgggcactcgc
ttcatccaggtccatccaataggccggaagggaatgcttgaaaagattgacatgattcgc
aaacgtgaagcagcacagggtgatggaaagaatcaggatggctcaaaatctcccaggaat
tgcgcccacattaccaacataccttacaacgtatccaagaaggatgtccgagcattcttg
gagggtgtggggctctatgaggacaccctaaaggttctgacagatagccatgggaatggg
ctagggcaggctatcttccagctacggaccgaggaagatgcacgcaaagctgaaagacta
caccgccaaaaactcaatgggcgtgatgcctttgtccaccttgtgacctttgagcaaatg
aaggaaattgagaggaatcctcctccccagaacaagagaggccaacgcaaccagaaccag
aaccagaaccatctgaaccaaaatcagaaccagcatcagcaggcccagcccagtccccag
caaccccatatcaacccatttgctgggattggggacgagtttaactttctcagaaacacc
atggggaatctcaacagtgccccctttgtgactccattctcagccccagggaacggattg
gcaggcccacctcctcttccacctctggctgcagggttaggggatgtgaatctgggagtg
gctccaccacttgttgctggtcttcctggagcgccaatattggagccgccgggctttcga
cctggagcaccagggggttccccattcggccaagatggcctgagaggattagtgcccttt
gaaaatgcaaacagaaaaggaggtggtggaggacagaaccggggaggaggggctaacaac
aaccaagggcgtccagggggtggggctgctgcaggtcagcaagtttttgcaccaggagct
gatggtctccgtaaccagcctaaccctggaggatctaacaatccaaacggtcaacggggt
gcatctggcccaacaattgttaagctacagaacatgccattcactgtaacagtagacgag
ataatggacttcttctatggttaccaggtcctgccaggctcagtctgcctgcagtttagt
gagaaaggcctgccaactggtgaggccatggtggcctttcaaaaccacgaggaggcctct
gctgcagtcatggacctcaatgaccgacctattggtgcacgcaaagtcaagataagcctt
ggttaa |