Labrus mixtus (cuckoo wrasse): 132977135
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Entry
132977135 CDS
T10666
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132977135 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132977135 (nfasca)
Cell adhesion molecules [BR:
lmix04515
]
Immunoglobulin superfamily
L1 family
132977135 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
Ig_4
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
132977135
NCBI-ProteinID:
XP_060897527
LinkDB
All DBs
Position
7:29921856..30060195
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AA seq
1370 aa
AA seq
DB search
MSGQGGHTALALVSLLLLLWREAATIEVPQDPKILKDLKQPPTIIKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ASNEFGVALSNKILLQVSKAPLWPKEVLEPVVVPEGSSLILACNPPPGLPPPLTFWMNSA
MIPIPQDKRVSMGLNGDLYFSNVLAKDSHTDYSCNARFPFTHTIQQKNPFILKVQSSESY
NDTSYNATDPYGGRKVAETTPTFLSPLGTESSKMVLRDEELLLECIAAGLPTPTIKWFKK
GGDLPAQKVKFEKFNKTLKIINVSEEDAGEYVCMANNQLGSVRHSIFVQVKAAPYWLDKP
TNLVLAPDENGRLVCRANGNPKPNIQWLINGQPLDSALPNPSRQVLGDTIIFRSVQMGSG
AVYQCNASNQHGYLLANALVSVLDMPPRMLGPKNQLIRVIENNRTFLDCPFFGSPLPVLR
WFKNGQGSGLDGGQYRVYINGTLEIRRARAEDEGTYTCVANNILGKADNQVRLEVKEATR
IVRAPEHQAVIRGTTARFDCKVTSDPSLSVTVTWMKDDKPLHMGWRLKKNEDTLTIPNVN
EGDEGTYTCTAKSDIDEDSSSARLTVLEEASLNPSVSSAFPPDRPDPPTDLDLSDPAERS
VRLTWIPGNDHRSPVTQFLVQFEEDRWEPGRWQNLSSYPGDLNSVILQLSPYVNYQFRVI
AINSVGLSEPSRPSPRYQTSGAAPDAIPRGLQGWGSKKDNMEITWEPLLDLERNGPNLYY
NVWWRRKDAGEEWSNVTTVESKYVIQNTETYVPYEIKIQSWNDHGPGPMSNGVIGFSGED
EPTDAPTDLRVSKVDSTKGNVHWKSVDMNSIMGEFKEYRLYYWRESSLVPGLAVNQEKKT
KGFYTTAAEPSAILSDLVPFSQYKMFMVAANSRFESPRSNTVAFTTKEGVPDAPKFFRIN
RRSFDTIHLEWDKPLEPNGILIGYQLKYRTVNGSRAGRPQLETFFPNVTEFTLRLPDRST
RYRFYLSALTQVGAGEVFAEESPHFANEENFTDTTGLVELTDASLASEFTPTPPPPAPHP
PTTIAPTTISTSTSTTTTTTTPSTTTTTTPTTTTTEATTTTTTPVLVPTKRIDQNVLVAP
GLDIWNLTVEPEINDVNVNWRHSFPAGSSEFVLEFTLDSDKSVKVVPMKQPPPVSVADLI
MGATYHLRVYSHEFNSVSSKTITFKTKPAYIDQVDIATQGWFIGLMCAIALIILILLIVC
FIKRSRGGKYPVREKKDLPLDQVDQKDQDGSFDYHSDEDNKPLQGSQTSLDGNVKESDDS
LVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagggcgggcacacggccctggctctcgtgtcattactgctgctactgtgg
cgcgaagcagcaaccatcgaagtcccacaagatccaaagatcctgaaagacctgaagcag
ccccccactataatcaaacagtcagtgaaggactacattgttgaccccagagacaacatc
atcatcgagtgtgaagccaagggcaacccggtgccaacgttctcatggagaaggaacggg
aagtttttcaacatcgggaaggatcccagggtgacgatgcgaaaacgctcggggactctg
gagatcggtttccgtagcggagggcggccggaggactacgagggagagtaccagtgtttc
gcctccaacgagtttggagtggctctgtccaacaaaatcctgctccaagtctccaaggct
cctctgtggcctaaagaagtgctggaaccagtggtggtacctgaaggctcctcgctgatc
ctcgcctgcaaccccccaccaggcctgcctcctcccttaaccttctggatgaacagcgct
atgatccccatccctcaggataagagggtgtccatgggtctgaacggggacctctacttc
tccaacgttttggccaaagattcgcacaccgactacagctgcaacgcccgcttccccttc
acacacaccatccagcagaagaaccccttcatactcaaagtccagagcagtgagtcatat
aatgacacgtcttacaatgccactgacccgtacggtggccgtaaagtagccgagaccacg
ccgaccttcctctcacctctggggacagagagctcaaagatggtgctacgagatgaagaa
ctgctgctggagtgcatcgccgccggactgccgacgcccaccatcaagtggttcaagaag
ggtggggacctgccggcgcagaaagtgaagtttgagaagttcaacaagaccctgaaaata
atcaacgtgtcggaggaggacgcgggggagtacgtctgcatggccaacaatcaattaggc
agcgtacgccactccatctttgtccaagtcaaagcggctccttattggctggacaaacca
acgaacctggtgctggcaccagatgagaacgggcgcctggtgtgtcgggcgaacggcaac
cccaaacccaacatccagtggctaatcaatggccagccattggacagcgctctccctaac
cccagcagacaggtgctgggtgacaccatcatctttcgctcggtgcagatgggaagcggc
gccgtctatcagtgcaacgcgtccaaccagcacggctatctgctggccaacgccttggtc
agcgtccttgacatgcctccgaggatgctgggacctaaaaaccaactgatcagggtcatc
gagaacaaccgcaccttcctggactgtcctttctttggttctcctctgcctgtcctacgc
tggtttaagaatgggcagggcagcgggctggatggaggtcagtatcgggtttacatcaac
ggcaccctggagatcaggcgggcccgagcagaggacgaggggacctacacctgtgtggcc
aacaacatcctgggaaaggccgataaccaggtccgcctggaagtcaaagaagcgactcgt
atcgttcgagcgccggagcaccaggcagtcatcaggggaaccacggctcgcttcgactgc
aaggtgacgtccgaccccagcctctccgtcaccgtgacgtggatgaaggacgacaagcct
ctccacatgggatggaggttgaagaaaaacgaggatacgctgaccatcccaaatgtgaac
gagggcgatgaggggacgtacacctgcactgctaaatctgatatagacgaggactcgtcc
tcagcccgcctcactgtgttagaggaagcctccctcaacccctcagtctctagtgccttc
cctccagaccgtccagaccctccaacagatttggatctctcagatccagctgaacgcagc
gttcgcctcacctggatccccggaaacgaccacaggagtccggtcacacagttcctggtc
cagtttgaggaggaccgctgggagccgggccggtggcagaacttgtcctcttaccccgga
gacctcaactctgtcatcctgcagctctccccgtacgtcaactatcagttcagagtcatc
gccatcaactctgtgggcctgagcgagcccagccgcccctcgcctcgataccagaccagc
ggagcggcccccgatgccatccccagaggtctgcaggggtggggctccaagaaggacaac
atggagataacatgggagcctctgcttgacctggagaggaacggtccaaacctttactac
aacgtgtggtggagacggaaggacgccggggaggagtggagtaacgtgaccacggtggag
tccaaatatgtcatccaaaacacagaaacatacgtgccttatgagatcaaaatccagagc
tggaacgaccatggacctggacccatgtccaacggggtcatcggattctctggagaggac
gagcccaccgacgctcccactgacctgcgagtgtcgaaggtggacagcacaaaggggaac
gtccactggaagtctgtggacatgaactccatcatgggagagttcaaggagtacagactg
tattactggcgcgagtccagtctggttcctggtctggcggtcaatcaggagaagaagacc
aaaggtttctacaccaccgccgccgagccgtccgccatcctcagcgacctggtgcccttc
tcccagtacaagatgttcatggtggcggcgaacagtcgcttcgagagtccgcgcagcaac
acggtggcgttcaccaccaaggagggagtgccggacgctccaaagttcttcaggataaac
cgcagaagttttgacaccattcacctggaatgggacaaacctctggagcccaacggcatc
ctgattggataccagctcaagtaccgcacagttaacggctcccgagcgggtcgtcctcag
ttggagacgttctttcctaacgtgacagagttcacccttcgcctgccggacagatccacc
cgctaccggttctacctgtcggcgctcacacaggtgggagctggggaggtgttcgcagag
gagtcgccgcacttcgccaatgaagaaaactttactgacactacagggctagtcgagctt
accgacgcctccttggcttcagagttcacccctactcctcctcctcccgctccacatcct
cctactaccatcgctcctacaaccattagtacctcgacttctacaactacgaccacgact
actccttctacaaccaccaccacaacccccaccaccactacaaccgaggcaaccacgacc
accacaactcctgtgctggtccccaccaagcgtatagatcaaaatgtgttggtggcccct
gggctggacatctggaatctgacggtggagcctgaaattaacgacgttaacgtcaactgg
agacacagcttcccggccggcagcagcgagtttgtgctagagttcacactggacagcgac
aagtcggtgaaagttgtaccgatgaaacaaccgccccccgtttcagtggcggatctgatc
atgggcgccacgtaccatctgagggtttactcccatgagttcaacagcgtcagcagcaaa
acgatcacctttaagaccaaaccagcctacatagaccaggtggacatcgccacccagggc
tggttcattggcttgatgtgtgccatcgccctcatcattctgatcctgctcatcgtctgc
ttcatcaagaggagtcgcggaggcaaatacccggtgcgtgagaaaaaagatctccccttg
gaccaggtagatcagaaagaccaggatggatcctttgattaccacagcgacgaggacaac
aaacctctgcagggcagccagacgtcgctggacggcaacgtgaaggaaagcgacgacagc
ctggtggactacggcgagggcggcgacggccagttcaacgaggacggctctttcatcggc
cagtacacggtgaagaaggacaaggacgagacggagggcaacgagagctctgaggccacc
tcgcccgtcaacgccatctactccttggcgtag
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