KEGG   Labrus mixtus (cuckoo wrasse): 132977390
Entry
132977390         CDS       T10666                                 
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132977390 (pbrm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmix03021]
    132977390 (pbrm1)
   03036 Chromosome and associated proteins [BR:lmix03036]
    132977390 (pbrm1)
Transcription machinery [BR:lmix03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     132977390 (pbrm1)
Chromosome and associated proteins [BR:lmix03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    132977390 (pbrm1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 132977390
NCBI-ProteinID: XP_060897904
LinkDB
Position
7:complement(678083..691947)
AA seq 1644 aa
MALKRRRATSPSSSVSGGDFDDSQTSTLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVDQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGDYEEDDEDGYDTQDNPGGSTEDES
APSCLKEFLEQLLDAVVSYIEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKI
QLGHYRSVSAMAKDVDLLVKNAKTYNEPGSQVFKDANTIKKIFSQKKSEMEHGEPIKSSM
RIRNRRSAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESLTSNMDMTNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYFHQISHPICLHQIKNKMKNNEYESVEHVDS
DLTRMFENAKRFNVPHSSIYKRALKLQQIQQMKRKELLQRDDDDDGDSMLSSATSDTSST
KRKSHKKNTKKNRMKALLLSVSEAREAGTGRRLCDLFMVKPSKKDYPDYYKVILEPMDLR
TIEHNIRSDKYMTEDAMVEDMRLMFRNARHYNEEGSRVYNDADVLEKIMKDRRRDLGPAT
DDDDIMSPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSR
AELPDYYIAIKKPVDMEKIKSHMMANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDAL
MLHRVLLETRRDLEGGDDTHVPDVPRLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAL
DPANPEKPRLNFEIIRSNVDRGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQ
FFIRIRDELCKNGEILMSPALSYTSKHLHNDVEKEKKEKLPKEFEEDKIKREEEKREAEK
REDTVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGE
KWLYGCWFYRPNETFHLATRKFLQKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLHPEG
FRSEDVFVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASMFAPKQEEKPS
EMADESKMTDVIVDKENNLCLQEREDVPMDMTNGEPGCQYYEQLCYNNQWLKVGDCVYIG
SHGLVRHRVGRVEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMT
CIIGKCVVSSYKDYLSCRPTEVPEENILLCESRYIESEKQMKKFKGLKRFSLSGKVVEDE
IYYFRKLIVPQKEPSPLLDKKIEKLEAKFADMTDEELEDLGDDDGELGDHSLPRMQSSMS
SDMDTMPYTPPQSTPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELS
RLVGTEWRNLEGSKKAEYEERAAKVAEQQERERAHHQTSPRAGTPVGALMGVVPPPTPMG
MLNPSMTPVSGMMGGYRSALMPSWGHINSMFSMAGIPTHHMGVSLLPQHLLPVLPGFPGM
QYFGVSGLAGGAGNIHGSQMGLLGPGQQAPPPYPGQGHMGQPAPQQPSTPVFVSPPAKTQ
RLLHSEAYLRYIEGLTAESSTISKWDHTLSVKKQDVRLTKEQESRLPSHWLKSKGAHKTM
ADALWRLRDLMLRDTLNIRQTHNL
NT seq 4935 nt   +upstreamnt  +downstreamnt
atggcattgaaaagaagaagagcaacatccccctctagcagtgtgagtggaggagatttt
gacgatagccagacttcaacgttagtctcttcaattgggagaaagaggagaaggacctca
aacattccaactgtggatcctattgctgtatgtcatgaactatacaacactatcagagat
tacaaggatgaccagggcaggatgctgtgtgagctcttcatcagagccccaaaacgaagg
aatcaaccagactattaccatgtggtgtctcagcctattgacatgatgaagatccagcag
aaattaaagatggaggagtatgatgatgttgaccaactcaccagtgactttcaactgtta
ttcaacaatgcaaaaacatattacaagtctgacagtcctgagtacagggcagcctgtaaa
ctgtgggacctttacctgcggaccaaaaatgaatttgttcagcgaggggattatgaagag
gatgatgaagatggctacgacacacaagacaaccccggtggttccactgaagatgagagt
gctccctcctgcttgaaagagttcctcgagcagctcctcgatgctgtggtgtcgtacatc
gagcccactggccgcctggtcagcgaactcttccagaagcttccctccaaaatgcaatac
cctgattattatgccatcattaaggaaccaatagatctgaaaatcatcgctcaaaagatt
cagttgggccactacaggagtgtcagtgccatggccaaagatgtcgatttgctggttaag
aacgctaaaacttacaatgagcctggatcacaggtgtttaaggatgcaaacaccatcaaa
aagattttctcacaaaagaagtcggagatggaacacggagaaccaatcaagtccagcatg
cgtatcaggaacagaaggtctgctcagggagaccgcctctcagctatcaccatggctctt
cagtatgaaagtgatgaggagggcatcctctctggttctgtgcactacgacgaaggggaa
tctgaggcggagagtttgacctcgaacatggacatgactaatcccatctttcagctgtat
gaggccgtgcgaggagcaaggaacagccagggccagctgatctctgagcctttcctgcag
ctgccctccaggaaggactaccctgactactttcaccagatcagtcaccccatctgcctc
caccagatcaagaacaagatgaagaacaatgagtatgagagcgttgagcacgttgactct
gatctgacacggatgtttgagaacgccaaacgcttcaatgttcctcattcctccatctac
aagcgggcgctcaaactccaacagatccagcagatgaagaggaaggagcttttacagaga
gatgatgatgatgatggagacagcatgctgtcctctgccacttctgacaccagtagtaca
aagagaaaaagtcacaagaagaacacaaagaaaaaccggatgaaggctctcttactttct
gtgagtgaggctcgagaagccggcacaggtcgcagactgtgtgaccttttcatggtgaag
ccctcgaagaaggactatcccgactactacaaggtcatcctggaacccatggacctcagg
accatagagcacaacattcgctcggacaaatacatgactgaagatgctatggtggaggat
atgaggctgatgtttcgcaatgctcgacactacaatgaagaaggctcacgggtctacaac
gatgctgatgtcctagagaagattatgaaagacagacgcagggatcttgggcctgcaaca
gacgatgatgatataatgtcacccaagttgaaaataagaaagaacagcatcactctgaag
aagtccaaatacttaacacctctacagcagaagcttaatgaactttatgaagctgttaag
aactacacagataaacggggacgtcgtctcagcaccatcttcctccgactgccgtctcgc
gccgagctccctgattactacattgccattaaaaaacctgtggacatggagaagatcaag
agccacatgatggctaacaagtaccaggatgtggacgccctggtggaggacttggtgctc
atgttcaacaacgcctgtacctacaacgagcccgagtccttgatttaccgcgatgctctc
atgttgcacagggtgctgctggagaccaggcgggacctggaaggaggagatgacacccat
gtgcctgatgtgccccgcctcatccaggaactcatccgaagtctatttgtctccgtgcta
ggtcaccaagacgatgagggccgttgctacagtgattcactggcagagattcccgcctta
gatccggcaaatcctgaaaagccacgactcaattttgagataatcaggtctaatgtagat
cgagggcgttataagaggctggatgtgtttcaggaccacatgtttgaagtcctggaaaag
gccagacgattgaacaggactgattcagagatttttgaagacgccgtagagctgcagcag
ttctttatccggatcagagatgagctgtgtaagaacggagagatcctgatgtctccagct
ctcagctacacatccaaacatctgcacaacgacgtggaaaaggagaagaaggagaagctt
cccaaggagtttgaagaagacaaaatcaagagggaagaggaaaaaagagaagcggagaag
agagaggacactgttggaggatcgtggcagtccaatctgcaacgcacatacagtcaggac
tgcagcttcaaagacagcatgtaccatgtgggagactacgtgtatgtggaacctgcagag
ccaaacctccagcctcacatcatctatattgaacgcctctggcaggatgacacaggtgag
aagtggctgtacggctgctggttctacaggccaaatgaaacatttcacctcgccacgaga
aagttcttgcagaaggaggtttttaagagcgactattacaacaaagctcctgtcagcaag
attctggggaaatgcgtggtcatgtttgtaaaggagtacttcaaacttcacccagaaggc
ttcagatctgaggatgtttttgtctgcgagtctcgctactctgccaagtccaagtccttc
aagaagatcaagatgtggaccatgcccttgagctcagtccgttttgttcccagagaggtc
ccgctacctgtcgtccgtgtggcgtcgatgtttgcccccaaacaagaggagaaaccctca
gagatggcagatgaaagcaaaatgacagacgttattgtagacaaggaaaacaatctgtgt
ctgcaggagagggaggacgttccaatggatatgaccaatggggagcccgggtgtcaatac
tatgaacagctctgctacaacaaccagtggcttaaagtgggagactgcgtttacattggt
tcacatgggctagtgcgccaccgagtgggaagggttgagaaaatgtggatgcgagatgga
gcaggatacttctttggtccaatcttcattcatccagaggaaactgagcatgagcccacc
aagatgttctacaagaaggaagtgtttctgagcaacctggaggagacctgtcctatgacc
tgcatcatagggaagtgtgtggtgtcgtcatacaaagactatctgtcctgccggccaact
gaagtgcctgaggagaacattctgctctgtgagagtcgctacattgagagtgagaagcag
atgaagaaatttaaaggtcttaagcgcttttctctctcagggaaagtggtggaggatgaa
atctactatttccggaagctgattgtgccccagaaggagccgtcccctcttctagacaag
aaaattgagaaactggaggctaaatttgctgatatgacggacgaggagctagaggatctt
ggggatgatgatggggagcttggggaccactctcttcctcggatgcagtcgtccatgtcc
agtgacatggacaccatgccctacactcctccacagtccacaccgaaatccataaaggga
ctttcaaagaaggagggctcaaagcgtaaaatcaacatgagtggctacatcttgttcagc
agtgagatgcgagcagtcatcaaagcccagcacccagacttctcctttggggagctgagc
cgcctagttggcacagagtggagaaacctggagggctccaagaaagctgaatatgaagag
cgagcagctaaagtggccgaacagcaggagcgcgagagggctcatcatcagacgtcccct
agagcaggtaccccagtaggggctctgatgggggtggtacctcccccaacacccatgggg
atgctaaatcccagcatgacgcctgtgtcaggtatgatgggaggatataggtcagctctg
atgccctcctggggccacataaacagcatgtttagtatggctggcatacccacacaccac
atgggggtttctctcctcccccaacatctcctgcctgttttgcctgggtttcctggaatg
cagtactttggggtctcgggcttggcaggtggagcaggaaacatacatggatcacagatg
ggtttgctgggcccagggcagcaagctccaccaccctacccaggacaaggccacatggga
caacctgcgcctcagcagccctccaccccagtgtttgtgtccccaccagccaagactcag
cggctgctccactctgaggcatacctcagatacattgagggcctaacagcagagtcctct
accattagcaagtgggaccacacactctcagttaaaaaacaagatgtgcgtctgacaaaa
gagcaagagagcagactaccatcccactggcttaagagtaaaggggcccacaagacaatg
gcagatgcactttggagactccgtgacctgatgctgcgagacaccttaaacatccgtcag
acgcacaacctgtag

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