Labrus mixtus (cuckoo wrasse): 132977390
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Entry
132977390 CDS
T10666
Symbol
pbrm1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132977390 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmix03021
]
132977390 (pbrm1)
03036 Chromosome and associated proteins [BR:
lmix03036
]
132977390 (pbrm1)
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132977390 (pbrm1)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
132977390 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132977390
NCBI-ProteinID:
XP_060897904
LinkDB
All DBs
Position
7:complement(678083..691947)
Genome browser
AA seq
1644 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDSQTSTLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRD
YKDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVDQLTSDFQLL
FNNAKTYYKSDSPEYRAACKLWDLYLRTKNEFVQRGDYEEDDEDGYDTQDNPGGSTEDES
APSCLKEFLEQLLDAVVSYIEPTGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKI
QLGHYRSVSAMAKDVDLLVKNAKTYNEPGSQVFKDANTIKKIFSQKKSEMEHGEPIKSSM
RIRNRRSAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESLTSNMDMTNPIFQLY
EAVRGARNSQGQLISEPFLQLPSRKDYPDYFHQISHPICLHQIKNKMKNNEYESVEHVDS
DLTRMFENAKRFNVPHSSIYKRALKLQQIQQMKRKELLQRDDDDDGDSMLSSATSDTSST
KRKSHKKNTKKNRMKALLLSVSEAREAGTGRRLCDLFMVKPSKKDYPDYYKVILEPMDLR
TIEHNIRSDKYMTEDAMVEDMRLMFRNARHYNEEGSRVYNDADVLEKIMKDRRRDLGPAT
DDDDIMSPKLKIRKNSITLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSR
AELPDYYIAIKKPVDMEKIKSHMMANKYQDVDALVEDLVLMFNNACTYNEPESLIYRDAL
MLHRVLLETRRDLEGGDDTHVPDVPRLIQELIRSLFVSVLGHQDDEGRCYSDSLAEIPAL
DPANPEKPRLNFEIIRSNVDRGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQQ
FFIRIRDELCKNGEILMSPALSYTSKHLHNDVEKEKKEKLPKEFEEDKIKREEEKREAEK
REDTVGGSWQSNLQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGE
KWLYGCWFYRPNETFHLATRKFLQKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLHPEG
FRSEDVFVCESRYSAKSKSFKKIKMWTMPLSSVRFVPREVPLPVVRVASMFAPKQEEKPS
EMADESKMTDVIVDKENNLCLQEREDVPMDMTNGEPGCQYYEQLCYNNQWLKVGDCVYIG
SHGLVRHRVGRVEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMT
CIIGKCVVSSYKDYLSCRPTEVPEENILLCESRYIESEKQMKKFKGLKRFSLSGKVVEDE
IYYFRKLIVPQKEPSPLLDKKIEKLEAKFADMTDEELEDLGDDDGELGDHSLPRMQSSMS
SDMDTMPYTPPQSTPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELS
RLVGTEWRNLEGSKKAEYEERAAKVAEQQERERAHHQTSPRAGTPVGALMGVVPPPTPMG
MLNPSMTPVSGMMGGYRSALMPSWGHINSMFSMAGIPTHHMGVSLLPQHLLPVLPGFPGM
QYFGVSGLAGGAGNIHGSQMGLLGPGQQAPPPYPGQGHMGQPAPQQPSTPVFVSPPAKTQ
RLLHSEAYLRYIEGLTAESSTISKWDHTLSVKKQDVRLTKEQESRLPSHWLKSKGAHKTM
ADALWRLRDLMLRDTLNIRQTHNL
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaaagaagaagagcaacatccccctctagcagtgtgagtggaggagatttt
gacgatagccagacttcaacgttagtctcttcaattgggagaaagaggagaaggacctca
aacattccaactgtggatcctattgctgtatgtcatgaactatacaacactatcagagat
tacaaggatgaccagggcaggatgctgtgtgagctcttcatcagagccccaaaacgaagg
aatcaaccagactattaccatgtggtgtctcagcctattgacatgatgaagatccagcag
aaattaaagatggaggagtatgatgatgttgaccaactcaccagtgactttcaactgtta
ttcaacaatgcaaaaacatattacaagtctgacagtcctgagtacagggcagcctgtaaa
ctgtgggacctttacctgcggaccaaaaatgaatttgttcagcgaggggattatgaagag
gatgatgaagatggctacgacacacaagacaaccccggtggttccactgaagatgagagt
gctccctcctgcttgaaagagttcctcgagcagctcctcgatgctgtggtgtcgtacatc
gagcccactggccgcctggtcagcgaactcttccagaagcttccctccaaaatgcaatac
cctgattattatgccatcattaaggaaccaatagatctgaaaatcatcgctcaaaagatt
cagttgggccactacaggagtgtcagtgccatggccaaagatgtcgatttgctggttaag
aacgctaaaacttacaatgagcctggatcacaggtgtttaaggatgcaaacaccatcaaa
aagattttctcacaaaagaagtcggagatggaacacggagaaccaatcaagtccagcatg
cgtatcaggaacagaaggtctgctcagggagaccgcctctcagctatcaccatggctctt
cagtatgaaagtgatgaggagggcatcctctctggttctgtgcactacgacgaaggggaa
tctgaggcggagagtttgacctcgaacatggacatgactaatcccatctttcagctgtat
gaggccgtgcgaggagcaaggaacagccagggccagctgatctctgagcctttcctgcag
ctgccctccaggaaggactaccctgactactttcaccagatcagtcaccccatctgcctc
caccagatcaagaacaagatgaagaacaatgagtatgagagcgttgagcacgttgactct
gatctgacacggatgtttgagaacgccaaacgcttcaatgttcctcattcctccatctac
aagcgggcgctcaaactccaacagatccagcagatgaagaggaaggagcttttacagaga
gatgatgatgatgatggagacagcatgctgtcctctgccacttctgacaccagtagtaca
aagagaaaaagtcacaagaagaacacaaagaaaaaccggatgaaggctctcttactttct
gtgagtgaggctcgagaagccggcacaggtcgcagactgtgtgaccttttcatggtgaag
ccctcgaagaaggactatcccgactactacaaggtcatcctggaacccatggacctcagg
accatagagcacaacattcgctcggacaaatacatgactgaagatgctatggtggaggat
atgaggctgatgtttcgcaatgctcgacactacaatgaagaaggctcacgggtctacaac
gatgctgatgtcctagagaagattatgaaagacagacgcagggatcttgggcctgcaaca
gacgatgatgatataatgtcacccaagttgaaaataagaaagaacagcatcactctgaag
aagtccaaatacttaacacctctacagcagaagcttaatgaactttatgaagctgttaag
aactacacagataaacggggacgtcgtctcagcaccatcttcctccgactgccgtctcgc
gccgagctccctgattactacattgccattaaaaaacctgtggacatggagaagatcaag
agccacatgatggctaacaagtaccaggatgtggacgccctggtggaggacttggtgctc
atgttcaacaacgcctgtacctacaacgagcccgagtccttgatttaccgcgatgctctc
atgttgcacagggtgctgctggagaccaggcgggacctggaaggaggagatgacacccat
gtgcctgatgtgccccgcctcatccaggaactcatccgaagtctatttgtctccgtgcta
ggtcaccaagacgatgagggccgttgctacagtgattcactggcagagattcccgcctta
gatccggcaaatcctgaaaagccacgactcaattttgagataatcaggtctaatgtagat
cgagggcgttataagaggctggatgtgtttcaggaccacatgtttgaagtcctggaaaag
gccagacgattgaacaggactgattcagagatttttgaagacgccgtagagctgcagcag
ttctttatccggatcagagatgagctgtgtaagaacggagagatcctgatgtctccagct
ctcagctacacatccaaacatctgcacaacgacgtggaaaaggagaagaaggagaagctt
cccaaggagtttgaagaagacaaaatcaagagggaagaggaaaaaagagaagcggagaag
agagaggacactgttggaggatcgtggcagtccaatctgcaacgcacatacagtcaggac
tgcagcttcaaagacagcatgtaccatgtgggagactacgtgtatgtggaacctgcagag
ccaaacctccagcctcacatcatctatattgaacgcctctggcaggatgacacaggtgag
aagtggctgtacggctgctggttctacaggccaaatgaaacatttcacctcgccacgaga
aagttcttgcagaaggaggtttttaagagcgactattacaacaaagctcctgtcagcaag
attctggggaaatgcgtggtcatgtttgtaaaggagtacttcaaacttcacccagaaggc
ttcagatctgaggatgtttttgtctgcgagtctcgctactctgccaagtccaagtccttc
aagaagatcaagatgtggaccatgcccttgagctcagtccgttttgttcccagagaggtc
ccgctacctgtcgtccgtgtggcgtcgatgtttgcccccaaacaagaggagaaaccctca
gagatggcagatgaaagcaaaatgacagacgttattgtagacaaggaaaacaatctgtgt
ctgcaggagagggaggacgttccaatggatatgaccaatggggagcccgggtgtcaatac
tatgaacagctctgctacaacaaccagtggcttaaagtgggagactgcgtttacattggt
tcacatgggctagtgcgccaccgagtgggaagggttgagaaaatgtggatgcgagatgga
gcaggatacttctttggtccaatcttcattcatccagaggaaactgagcatgagcccacc
aagatgttctacaagaaggaagtgtttctgagcaacctggaggagacctgtcctatgacc
tgcatcatagggaagtgtgtggtgtcgtcatacaaagactatctgtcctgccggccaact
gaagtgcctgaggagaacattctgctctgtgagagtcgctacattgagagtgagaagcag
atgaagaaatttaaaggtcttaagcgcttttctctctcagggaaagtggtggaggatgaa
atctactatttccggaagctgattgtgccccagaaggagccgtcccctcttctagacaag
aaaattgagaaactggaggctaaatttgctgatatgacggacgaggagctagaggatctt
ggggatgatgatggggagcttggggaccactctcttcctcggatgcagtcgtccatgtcc
agtgacatggacaccatgccctacactcctccacagtccacaccgaaatccataaaggga
ctttcaaagaaggagggctcaaagcgtaaaatcaacatgagtggctacatcttgttcagc
agtgagatgcgagcagtcatcaaagcccagcacccagacttctcctttggggagctgagc
cgcctagttggcacagagtggagaaacctggagggctccaagaaagctgaatatgaagag
cgagcagctaaagtggccgaacagcaggagcgcgagagggctcatcatcagacgtcccct
agagcaggtaccccagtaggggctctgatgggggtggtacctcccccaacacccatgggg
atgctaaatcccagcatgacgcctgtgtcaggtatgatgggaggatataggtcagctctg
atgccctcctggggccacataaacagcatgtttagtatggctggcatacccacacaccac
atgggggtttctctcctcccccaacatctcctgcctgttttgcctgggtttcctggaatg
cagtactttggggtctcgggcttggcaggtggagcaggaaacatacatggatcacagatg
ggtttgctgggcccagggcagcaagctccaccaccctacccaggacaaggccacatggga
caacctgcgcctcagcagccctccaccccagtgtttgtgtccccaccagccaagactcag
cggctgctccactctgaggcatacctcagatacattgagggcctaacagcagagtcctct
accattagcaagtgggaccacacactctcagttaaaaaacaagatgtgcgtctgacaaaa
gagcaagagagcagactaccatcccactggcttaagagtaaaggggcccacaagacaatg
gcagatgcactttggagactccgtgacctgatgctgcgagacaccttaaacatccgtcag
acgcacaacctgtag
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integrated database retrieval system