Labrus mixtus (cuckoo wrasse): 132977689
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Entry
132977689 CDS
T10666
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03083
Polycomb repressive complex
lmix04980
Cobalamin transport and metabolism
lmix05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132977689 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
132977689 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132977689 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132977689 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmix03036
]
132977689 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132977689 (hcfc1a)
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132977689 (hcfc1a)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
132977689 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
132977689 (hcfc1a)
MLL-HCF complex
132977689 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
132977689 (hcfc1a)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
132977689 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
fn3
Motif
Other DBs
NCBI-GeneID:
132977689
NCBI-ProteinID:
XP_060898444
LinkDB
All DBs
Position
7:complement(7614836..7629545)
Genome browser
AA seq
1704 aa
AA seq
DB search
MSAPGSAVSGTTVSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPASPAMSAAPSQPL
NSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSATGTSLVTVRPSQPGKSPITVTSLPPGVR
MVVPAQTTQGSPQMSGMAALAAAAAATQKIPPSSAGTLLNVPAGATILKTVAMSPGTTTV
KVASPVMVSNPATRMLKTAAAQVGTATGSSPTTRPIITVHKSGAVTVAQQAQVVTTVVGG
VTKTITLVKSPLSMGSGGTLISNLGKMMSVVQTKPVQTSAHTGQASTNPLTQLIQTKGPL
PAGTILKLVTSADGKPTTIITTSQAGGPGNKPTILNISGVSPTTTKQGTTIIKTIPMSAI
MSQSGATGVTSSTGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLTQVVLKGAP
GQPGTILRTVPMGTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSSSLAG
GAVDSSNASLVTPITTLGTISTLSSQVISPSSITVSAAQTSLTSASSLPSSTITVQNQPT
QVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSAEAGAAGEGSGTVTLVCSNPPCETHE
TGTTNTATTSSATIGAGKVCSNPPCETHETGTTNTATTSSATLKAGQVCSNPPCETHETG
TTNTATTASSNMSTPRMCSNPPCETHETGTTNTATTASSNMGAAQKVCSNPPCETHVTGT
TNTATQSSSNMSAGQTGTAQRVCSNPPCETHETGTTNTPSTATSSMGGSEQTSTATGTVQ
RVCSNPPCETHETGTTNTATTATCSMETGEGTATQQTEEGAEGPSSTEAASTTTATGPAT
TAQSRAITTVTQSTPAPGPSVPSISSITEGVSTAASSTEEPMQTDETASAEAATAEEGAT
AMETQAQGEAATGTALNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQ
ALAIQAVLQAAQQAVMNESVNTGESQQPTSIPIMLTQQELAALVQQQQQLQEAQAAAQQA
SVDASMPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLAPSSTFAPSI
SVASPAKLQAAAALAEVANGIEGEKPSPQPTPVKPVIKKENQWFDVGIVKVTNMVVTHFY
VPGDDSHGDDDSGIMPDYSQMKKMELQPGTAYKFRVAGINACGRGSFSEISAFKTCLPGF
PGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTAEAKASTPAQLAFMRV
YCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAK
PAPKRPGTSPDTKATGPKKARTDQ
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacagtgtcggtcctgcagccccggtgg
aaacgggtcctcggatggtccggtccggttccccggcccagacatggacacagagctgtg
gccataaaggaactcatggttgtgttcggcggtggaaacgaagggattgtggacgaactg
cacgtatacaacactgcaacaaaccagtggtttatcccagcagtccgaggtgatattcct
cctggttgtgctgcgtatgggtttgtttgtgatggcacaaggttgctggtgtttggtgga
atggttgagtatggaaaatacagcaacgatctctatgagctacaggctagcagatgggaa
tggaaaaagctgaaggcaaaaaaccccaagaatggtccccctccttgtcctcgtcttggc
cacagtttttccctggttggcaacaaatgctacctatttggtggactcgccaatgacagc
gaggacccaaaaaacaacattcccagatacctaaatgatctttacacactcgagctgcgt
gctggttccagcgtggttggatgggatattccgatcacatatggagttttgcctcctccc
cgtgagagccacacggctgtggtatacacagaaaagacgagcaggaaatctcgcctgatt
atctatggagggatgagtggttgccgtcttggagatctgtggaccctcgatattgatacc
ctgacatggaacaaaccatcagtaaacgggacagcaccgctccccagaagtcttcattct
gccaccaccatcacaaacaagatgtatgtttttggaggatgggttcctttggtgatggac
gatgtcaaagtagcaacacacgagaaggagtggaagtgcacaaacactcttgcatgtcta
aaccttgactcaatgtgttgggagacggtgttaatggatactcttgaagataacatccct
agggcccgtgcaggccactgtgctgtggccattaattccagactttatgtttggagcggt
cgtgacggatatcgtaaagcttggaacaaccaagtctgttgtaaagacctctggtacctt
gaaacagagcggccgcatgcccctgccagggtgcagttagtccgtgccaacacaaattct
ctggaggtgagctggggtgccgtctcaactgctgacacctacttattgcagctacagaaa
tatgatatccctgcaactccagcctcaccagccatgagtgcagcgccctcgcagcctttg
aactctcctaagagccctgcaccagctgctgcagcaccttctgctcagagcctaccacag
acagctgttttgaaggttgcagcacaacagtctgccacaggcacatctcttgtcacagtc
cgccccagccagcctgggaaatcccctatcactgtgacatcccttcctccaggtgtacga
atggtagtgcctgctcagaccacacaaggatcacctcagatgagtggcatggcagctctt
gctgcagctgcagcagcaacacagaagataccgccttcctctgcaggcactctcctcaat
gttcctgcaggtgctaccattcttaagaccgtagcgatgtctccgggcacaaccacagtg
aaagttgcttctccagtcatggtcagtaacccagccacacggatgctcaaaactgctgca
gctcaggtgggcacagcaactggctcctctcccaccacaagacccatcattactgtccac
aagtctggggcagtcacagtggcccagcaggcccaagtggtaaccacagtggttggaggg
gtcaccaagaccatcacccttgttaagagtcccctctctatgggcagcggtggcacattg
atctccaaccttggcaagatgatgtctgtggtgcaaaccaagccagtgcaaacatcagcg
cacacaggccaggcttcaactaaccctctcacacagctcatacagacaaagggtccttta
ccagctggcaccatactgaagctggtgacctctgcagatggcaagccaacaaccataatt
acaacttcccaggcaggaggaccaggaaataagcccactatcctcaacatcagcggtgtc
tctcctaccaccacaaagcagggcaccaccatcattaagactatccccatgtcagccatc
atgagccagtctggagctacaggtgtgacgagcagcacgggcatgaaaacaccaatcaca
atccttaccacaaaggtgatgaccactggaactcctggtaaaatcatcaccgcagtgccc
aaacttgccactgcagccggccagcagggactcacacaggtggttttgaaaggtgcgcct
gggcaacctggtactattttgcgcactgtgcccatgggcacagtgggtggtgttcgactt
gttacaccggtgacagtgtctgcagttaagccaactgtcaccactctagttgtcaagggg
actactggtgtcaccactcttggaacagttactggtacagtctcttctagcttggcagga
ggcgcagtggacagttccaacgcttctttggttacccccatcaccacattgggtacaatt
tctaccctgtccagtcaggtgatcagcccatcttccataactgtgtcagctgctcagaca
agtttgacctctgcctcatcattgccctcctctacaatcacagttcagaaccagcccacc
caggtgactctaatcacaacccccagtggtgtagaagctcaacccgtgcaggatctacca
gtgtcgatccttgcttcaccaacctcggagcagcccagctctgctgaggctggagcagct
ggagagggctctgggaccgtcaccttggtctgctccaacccgccctgtgagacccacgag
actggaaccaccaacacggccaccacctcctctgccaccattggagcaggaaaggtctgt
tccaatccgccctgcgaaacccacgagactggaacaaccaacacggccaccacctcctct
gcaacactgaaggcaggacaggtgtgctcgaaccccccctgcgagacccatgagactgga
acaaccaacacagccacaactgcatcttcaaacatgtccactccgcgcatgtgctccaac
ccgccatgcgagacccacgaaactgggacaactaacacagctactacagcctcgtctaat
atgggagcagcccaaaaggtgtgctccaacccaccctgtgagacccatgtgacggggaca
accaacacagccacccagtcttcatcaaacatgagtgcaggccaaacaggcacagctcag
agggtttgctcaaatccaccctgtgaaacacatgagactgggaccaccaacaccccatct
acagccacctccagcatgggaggtagcgagcagaccagcacagcaacaggcacggtccaa
agggtttgctccaacccgccctgtgaaacccacgagactgggaccaccaacacagccacc
accgccacctgcagtatggagacaggcgaaggcacagccacccagcagacagaagaagga
gcagaaggtcccagcagcacagaggcagcctccaccaccacggcaactggcccagctacc
accgcccagagcagggcaatcactaccgtcacacagtcgacaccagctcctggaccctct
gtaccttcaatatcatcaatcacagagggggtgagcactgctgcaagctctacagaggaa
ccaatgcaaactgatgagacagcatcagcagaagctgcaactgcagaggagggagctacc
gccatggagacacaagcacagggagaagcagccactggaacagctttgaatctgccctca
gagctgatgtctgagggtcagggagccacacttatggtgactggtctttcagacgaggag
ctggccgtgactgcagcagcagaagccgctgctcaggcagcagccactgaagaagcccag
gctcttgctatccaggctgtcctccaggcagctcagcaagccgtaatgaatgaaagtgtt
aacactggagagagccagcaacccaccagcatccccatcatgctgacccagcaggagcta
gcagcactggtccagcagcagcaacagctacaggaggctcaggctgctgcgcagcaggct
agcgtggacgccagcatgcctactgaaggccttgcccctgctgacagcctcaatgacccc
tctgtcgaaagtaatggacacaatgagatggctgccgcagtgaccagtgctgtggcatca
ctgctgccacggaccactgctgaaacactcgctccatcgagcacatttgcgccgtctata
tcggtggcaagtccagccaagctgcaagcagcagctgctttagcagaggttgccaatggc
attgagggagagaagccgagtcctcagccaactccagtgaagcctgttataaagaaagag
aaccagtggtttgatgttggaattgtgaaagtgacaaatatggttgttacccacttttat
gtgccaggagatgattcgcatggagatgatgactctggcatcatgccagactacagccag
atgaagaaaatggagctgcagcctggaactgcttacaagtttcgtgtcgctggaatcaat
gcttgtggccgtggatctttctcagagatatctgctttcaagacttgcctaccaggcttc
ccaggggcaccctgcgctatcaaaatcagcaagagcccagatggtgcacacctgacctgg
gagccaccctcggtgacgtcaggaaagatcatcgaatactcggtgtacttggccatccag
agcagccagacagctgaagccaaggcctcaactccggcacagctagccttcatgcgcgtg
tactgtgggcccaacccatcatgcttggtgcagtcgtcaagcctctccaatgcccacatc
gactacactaccaagccagccatcatcttccgtattgccgctcgcaatgagaagggttat
ggccctgccacccaagttcgatggttgcaagaatccggcaaagatgctgcatcggcaaaa
ccagccccgaaaagaccaggcacctctcctgataccaaggctactggtccaaagaaagca
aggacggatcagtga
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integrated database retrieval system
