KEGG   Labrus mixtus (cuckoo wrasse): 132977690
Entry
132977690         CDS       T10666                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix04137  Mitophagy - animal
lmix04140  Autophagy - animal
lmix04144  Endocytosis
lmix04145  Phagosome
lmix04148  Efferocytosis
lmix05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    132977690 (si:dkey-13a21.4)
   04145 Phagosome
    132977690 (si:dkey-13a21.4)
   04140 Autophagy - animal
    132977690 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    132977690 (si:dkey-13a21.4)
   04148 Efferocytosis
    132977690 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    132977690 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmix04131]
    132977690 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmix04147]
    132977690 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:lmix04031]
    132977690 (si:dkey-13a21.4)
Membrane trafficking [BR:lmix04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    132977690 (si:dkey-13a21.4)
Exosome [BR:lmix04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132977690 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   132977690 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   132977690 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   132977690 (si:dkey-13a21.4)
GTP-binding proteins [BR:lmix04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    132977690 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase MMR_HSR1 Gtr1_RagA ATP_bind_1 cobW IIGP PduV-EutP Septin AAA_16 GTP_EFTU AAA_22 AAA_24 AAA_5 AAA_7 RNA_helicase AAA_29 DAP3
Other DBs
NCBI-GeneID: 132977690
NCBI-ProteinID: XP_060898445
LinkDB
Position
7:7613505..7616314
AA seq 203 aa
MNAGKSPVLKIILIGNSGVGKSSFMNRYVTHHFTNAYRATIGTDFFSKTVNIDGDFVILQ
IWDTAGTERFQSLGTPLYRGAHCCMLVFDVTSRDSFSALEGWRNEFLIQGEPQEPSEFPF
IVLGNKTDLSNREVSRRQAMQWCEDIGAEYLEGSAKQDLDVEKPFLRAAQRGLQQYKKHT
LENTGHFQITCKQPRETRNTCEC
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaacgctggaaagagtccagtactgaaaataatcctcataggaaactccggggtggga
aaatcctccttcatgaacagatatgtgactcaccatttcaccaatgcctaccgggccact
atagggacagacttcttctcaaaaacagtcaacatagacggggactttgtcatcctgcag
atttgggacacagcgggtacagagaggttccagtctctgggcacacctttgtacagagga
gcccactgctgcatgctggtgtttgatgtcacatccagagatagtttctctgcactggag
gggtggaggaatgaatttctgatccagggcgagcctcaggagccatctgaattccccttt
atcgtgctgggcaacaagactgacctaagcaacagggaggtgtctcgcaggcaggccatg
cagtggtgtgaggacataggagctgaatacttggaaggaagtgccaaacaggatctagat
gtggagaagccgttcctgagagcagctcagagaggtttgcaacagtacaaaaaacacaca
ttggaaaatacaggacatttccagataacctgcaaacagccgagagaaactcgcaacacc
tgtgagtgctga

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