Labrus mixtus (cuckoo wrasse): 132977889
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Entry
132977889 CDS
T10666
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmix03037
]
132977889
Cilium and associated proteins [BR:
lmix03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
132977889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Crescentin
Tropomyosin
CENP-F_leu_zip
DUF2987
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
132977889
NCBI-ProteinID:
XP_060898787
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All DBs
Position
7:complement(10549100..10572233)
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AA seq
2020 aa
AA seq
DB search
MSAENSDTDTNKLESVIQRLEESVLSEEKRLTVRGPSPDAPPTCLPARVREIVTKNLNDN
AAGAMSSVMSIQEENRVLQGELSRLEDLLAHSRADRDELAIKYGAISERLEQALCFETGD
EDNDSPDSRSLAQQNVDLRRRLDEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKR
CGDLEQMLQVKSSELEKHRPTSETSNGSNQDESCSNLEDALIHLEEEQQRSSSLSAVNAM
LREQLEQAGLANEALSQDIRRLTADWTRAREELEQKESDWRREEESFHSYFSREHSRLLT
LWRQVVGFRRHICELKSATERDLSDMRNELSRASHSAQVYCADVSAALLSQEGGAALALE
REKALRVQLEEQLRERVSEMINLQTRTDSERVELNVRLSDSVREGEKLKGQIEDRDQEIV
ALMRRLEEQKGNDETEMQVLRAHTETLCDTLRDIAQAVFSDGESSSEADQDNSSSALLAL
IRGSSPCRSPSPRRSASPSRPSSSMAPISDAGLSALRSAVTNKTIQLQDVRGRLLSTQSS
AQQLRKQLSETESAKRDAEQRNQALQRERDAAQRERETTQREKERLKQERDTLASEKAAL
EKTVQAAQSSGHGLQMDCEKLQLTVACTQRERDNEREEKETAIQERDRAKAETQRIKKQW
DQSESRASAQRGELSAVKETHQQGEVERQLLEGERAQLSDALARAESSKAELSLLLNKLQ
SEDAALRDSLAKMGSLNEGLVQDKADLNTYIFQLEEDKALLQIQRREAEQEKLTIRDELV
RLEQERLELDSTRICLHNSLQDSEQSRTGIEEELLTLRTDRLKLQEQVSQLCAEVTALGA
ELSFSRGESQRSEVALEEAGRSRADLARDKAGLVVQLTASERENTVLSEELGAFRSERES
LETSLFELQQQLVQVDSRREQLEAENQNLRVRCETSAAELRRLRSDEENLLAQTEREKQA
ITQTLNAALQEAQQALRKTVSEHQEEMERLVSEKEVMQSSLLMEHEGTVRKLRQEAEDQL
RRAHRETEELQDDLRSLQHDRDQSLLQAETEKQQALSLKEAEKAVLCDRLSSLQAELSAA
ALEAEQMSREAAHYKEQEQFKFDTLTSELQELRCQLEDAASLHERDVQSLQETCTGLQSR
ADNALKELDQCRASLSANEESRDQLRREVLDIERHLNQSQEEAEKYRREGTDLRRSLDDV
TKERDAFSQSNSQLRESLRGAESERISLKRQCEEKEQRLAVLEENFSSAQKEAMELRGCL
REVERSRLEARRELQELRRQLKVLDGEKEQKGMEVAELQARLTLEEQREEERGKDIINLK
QKLTEAETARDSLKRELSMTVKRLEESESGWRGCERELSAQLQETRGCEKKLQDEIKNLT
LRAQVAQDSAAQSSLQLSEAQGRLAATEAELTRAEAGRRDLEFRLSSIQSALTRTLGIGA
GGRGGRGRSPGASSASPATISRHHSISPLRSSLSPPKELRLSTSDITLGSGAVSPERGDT
PLPLPQPELDPDTLRGDLRDFLQELREAQRERDDVRRQLGVLQRELEELAEERDSAQGRL
SQLQNALQENQEGKRGLDERLTTTQILLQQQEEAVRRGDRERRTLMDRVKDLERALQTAE
TDKKHTQEQLNKQRAAELRLEAERKRLREALEASEARATRVELGRRSLEGELQRLKLSLG
DREAEGQASQERCDSLLKKVAEGEARVSLMQREVERLSQALLKAQEGENSLKEKTSSVKK
SLQEATAAHSSTQSRLGAMQKTLNVAEQDKRLLQEKIDEARTSSAEGKRNISVLTERVQS
LQSELSQSELRREELEAELNNNQEALRQRSASLAEAQRSAQAAQTERATVEERLRGLQRA
VAMLETEKKDAERQAVRLEKDKNALRNTLDKVERQKLKTEEGSMRLSAEKNRLDRSLNTT
EQELQEAQQQILMLQTQLAEMEQSHSLCESLARQRDEAQHETERLRSSYRDVERTLGTRE
RAHRHRVKGLEEQVSTLKEQLQQEMKRKASLPSSLMSPGN
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgaaaactcagacaccgacaccaacaaactagaatctgtgatacagaggctg
gaggagagcgttttgtctgaggagaagaggctgacggtccgaggtccttcaccagatgcc
ccccctacatgtctgccagcacgagtacgagagatagtcacaaagaacctgaacgacaac
gcagctggagccatgtcctcggtcatgtccatccaggaggagaaccgggtgctgcaggga
gagctgtcgaggctggaggacctgctggcacacagccgagcggaccgagatgagctcgcc
atcaagtatggcgcaattagtgaacggctggagcaggcactatgttttgagaccggagac
gaagacaatgattcgcctgactctcgcagcttggcgcagcagaacgtggatttacggcgg
cggctggacgaggagcaggcggcctacaagcgtaaactcactgcgtaccaggagggtcag
cagaggcaggcgcagctcgttcagaagttgcaggccaaggtgcttcagtacaaaaagagg
tgtggagatctggagcagatgctgcaggtgaagtcatcggagctggagaaacacaggccg
acaagtgaaacatcaaatggaagcaatcaagatgaatcatgcagcaacctggaggacgct
ttaatccatctggaagaagaacaacagagaagtagcagtctctctgcagtgaatgccatg
ctgagggagcagctggagcaggccggtttggccaatgaagctcttagccaggacatacgc
agactcactgctgattggaccagagccagggaggaattggaacaaaaggagtctgactgg
aggagagaagaggagtccttccacagttattttagccgcgagcacagcaggctgcttaca
ctgtggcggcaggtggtcggatttcggaggcatatctgtgaactaaagagcgctactgaa
agggacttgtcagatatgcgtaacgagctgtctcgggcgtcacactctgctcaagtgtac
tgtgcggatgtgtctgccgcgcttctcagccaggaggggggagccgctctggccctggag
cgggagaaggcactgcgcgttcagctggaagagcagctgagagaacgcgtgtcagagatg
atcaatcttcagaccagaacagactccgagagggttgagcttaacgtcaggttgtcagat
tctgtgcgagagggggagaaactaaagggccaaattgaagacagagaccaagaaattgtg
gcgctgatgaggaggctcgaggagcagaaaggtaatgatgagactgagatgcaggtgctt
agagctcacacagagacgctgtgtgacaccctgcgagacattgctcaggcggttttctca
gacggagagtcgtcatctgaagcagaccaagacaactccagttctgcgctgctagctttg
atccgtggctcctccccctgccgctctccctctcctcgcaggtctgcctccccgtctcgg
ccctcatcctcgatggctcctatctctgacgccgggctgtctgcactgcgctctgcagtc
acaaataagacaatccagctgcaggatgttcgagggcgtctgctctccactcagtcttcg
gcacaacagttgcgaaagcagctttccgagacagaatctgctaaaagggacgcagaacag
cgaaaccaagctctgcagagagagagggatgctgctcagagagagagggagaccacacag
agagaaaaggagcgtctgaagcaggagagagacacccttgcaagtgagaaggcggccttg
gagaagaccgtgcaggctgcgcagagcagcggtcatggcctgcagatggactgtgagaag
cttcagctgactgtggcgtgcacacagcgagagcgagacaacgagagggaggagaaggag
acggccattcaggagagagaccgggctaaggcagagactcagaggataaagaagcagtgg
gatcagagcgagagtcgagcctctgctcaacgtggagagctgtctgcagtgaaggagact
caccagcagggggaggtggagaggcagctgctggagggagagcgagcccaactctctgat
gctcttgctcgggctgaaagcagtaaagcagagctctccctgctgctcaacaagctgcag
tctgaggatgcagctctaagagactctctggccaagatgggaagcctgaatgaaggccta
gtccaggacaaagctgacctcaacacctacatcttccagctggaggaagacaaggccctc
ctgcagatccagagacgggaggccgagcaggagaagttgaccatcagagacgagctggtc
cgattggagcaggaacggctggagctggactcgacccgcatctgtctgcacaactcactg
caggactctgagcaaagcaggaccgggattgaagaagagctgctgactctcaggacggac
agactgaagctgcaggagcaagtctcacagctttgtgctgaggtgacggctctgggagca
gagttaagtttttccagaggagagagtcagcgtagtgaggtggccttagaagaagcaggc
cggagtcgagcagatctggcccgggacaaagctggactggtggtccagctgacggcgtca
gagagagaaaacactgtgctgtcagaggaactaggagctttcaggtctgagcgggaatca
ctggaaactagtctgtttgagttgcagcagcagctcgttcaggtggattctcgtagagaa
cagctggaggcagagaaccaaaaccttcgagtccgctgtgagacttcagcagccgaactg
cggcgacttcgttcagatgaagaaaatctcttggcccagactgagagggagaaacaggct
attacccagactctaaacgctgcactgcaggaggcccagcaggctttacgcaagaccgtc
tccgaacatcaggaggagatggagaggctggtctcagaaaaggaggtcatgcagagcagc
ctgctgatggagcatgagggcactgtgaggaagcttaggcaggaggcagaggatcagctg
cgcagagcacatagagaaacagaggagctgcaggatgacctgaggagcctccagcacgac
agagatcagagtctgctgcaggctgaaactgagaaacaacaggccctctctctgaaggag
gcagagaaagcagtgttgtgtgacaggttgtcgtccctgcaggctgagctgtcagctgca
gctttggaagccgagcagatgtcgagagaagcagcacattacaaagagcaggagcagttc
aaatttgatacactgaccagtgagctgcaggagcttcgctgtcagctggaggacgcagcc
tctcttcatgagagggacgttcagagcctacaggagacctgcactggtcttcagtctcgg
gctgataatgctttaaaggagctggaccaatgcagagcttctctctctgctaacgaggaa
agtcgagaccagttgaggcgggaggtgttggacattgagcgacatcttaaccagagtcag
gaagaagctgaaaagtacagaagagaggggacggacctgcgacgcagcctcgatgacgtc
accaaagagagagatgctttcagccaatcaaatagccagctgagagaaagtctgagaggt
gcagaatcagagaggatcagccttaaaaggcaatgtgaggagaaggagcagaggctcgct
gtgctggaggagaatttctcatctgctcagaaggaggcgatggagctgcggggctgtctg
agagaagttgaaaggtcacgactggaagctcggagagaactccaggagctccgcagacag
ctgaaggttctggacggagagaaggagcagaaagggatggaggtggcagagctacaggct
cgcctgacgctggaggagcagagagaggaggagagagggaaagacattatcaatctaaaa
cagaagttaactgaagctgaaacagctcgagactccctcaaaagagaactctctatgaca
gtgaagcggctagaggagtctgagtcaggctggcgtgggtgtgagagagaactgagcgct
cagctgcaggagactcgtggctgtgagaaaaagctgcaggatgagattaagaacctgacc
ctacgcgctcaggtggctcaggactctgcagcccagtccagcctgcaactgagtgaggct
cagggtcgcctggctgccacggaggctgaactgacccgagccgaggccgggaggagggac
ctggagtttcggctaagcagcattcagtcggctctgacacggacgctgggcatcggagca
ggtgggagaggaggccgggggaggagcccaggagcgagctctgcatcaccagccactatt
tctcgccaccacagcatctcacccctgcgctcatcactgtcgccccctaaagaattaaga
ttgagcacctctgacatcactttaggctcaggggccgtgtcacctgagagaggggacaca
ccgctgcctctcccccagccagagcttgaccctgacaccctccgaggtgacctcagagac
ttcctgcaggagctgcgtgaggcacagagagagagggatgatgtgcgaaggcagctgggg
gtcctgcagagagagctggaggagctggcagaggaacgagactctgctcagggtcgtctt
tctcagcttcaaaacgccttacaggaaaatcaagaagggaagcgtgggctggatgaacgt
ctgaccaccactcagattttgctccagcagcaggaggaggcggtgaggagaggagacaga
gagaggaggactctcatggacagggttaaggatttagagcgagcgcttcagaccgctgag
acggataaaaaacacacacaggagcagttaaataagcagcgtgctgcagagctgcgtctg
gaggcggagaggaaacgtcttcgggaggcgctggaggcatctgaagcccgggcgaccagg
gtggagctggggaggcgcagtctggagggggagctgcagagacttaaactgagtctggga
gaccgggaggcggagggccaggcctcccaggagcgctgtgactctctgctgaaaaaggtg
gcagaaggagaggcccgtgtgtccctgatgcagagagaggtggagaggctgagccaggct
ctgctcaaagctcaggaaggtgaaaattctctcaaagagaagacgtcctccgtcaaaaag
agcctccaggaggcaacggctgctcacagcagtacacagagtcgtctgggtgctatgcag
aagacgctgaatgtggctgaacaggacaaaaggctattacaggaaaaaatagatgaagcc
cggacatcatcagcggaggggaaaaggaacatttctgtcctcactgagcgtgtgcaaagc
ttgcaaagtgaattaagccagagtgagctgagacgagaggaactggaggcagagctcaac
aacaatcaagaggctctgcgtcagcgctcggccagtctagcggaggctcagcgcagcgct
caggcagctcagacagagagggccactgttgaggagcgactgcgtgggctgcaacgagct
gtcgccatgctggagactgaaaagaaagatgctgagagacaggctgtgaggctggaaaaa
gacaagaatgctctgaggaatacactggataaggttgagcgtcagaagctgaagactgag
gagggcagcatgcggctgtccgcagagaaaaaccgcctggatcgctcgcttaacaccacg
gagcaggagctacaggaagctcagcaacagatactgatgctgcagactcagctggctgag
atggagcagtcgcacagtctgtgtgagagtttggcgaggcagcgtgacgaggcccagcac
gagacggagagactgaggagcagctacagggacgtggagcgaacgctgggtaccagggag
cgagctcacagacacagagtcaaaggcctggaggagcaggtgtccaccctgaaggagcag
ctgcaacaagagatgaaacggaaagcttctcttccatcctccttgatgtcaccgggaaac
tga
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