KEGG   Labrus mixtus (cuckoo wrasse): 132977909
Entry
132977909         CDS       T10666                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132977909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmix03019]
    132977909
   03036 Chromosome and associated proteins [BR:lmix03036]
    132977909
Messenger RNA biogenesis [BR:lmix03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     132977909
Chromosome and associated proteins [BR:lmix03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     132977909
    COMPASS/SET1 complex (yeast)
     132977909
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 VPS8_N
Other DBs
NCBI-GeneID: 132977909
NCBI-ProteinID: XP_060898812
LinkDB
Position
7:complement(10699071..10702240)
AA seq 315 aa
MKITDGVLRSFRVARTYGENSKKVNCVDFSPNGENAISSSDDDCIVLYDIREGKPQRTLY
SKKYGVDLIRYTHEDTQTVVYSSNKLDDTIRYLSLSDNKFIRYFPGHTARVISLSMSPVD
DTFISGSLDKTIRIWDLRSPNCRGLTNPLGKPVCSFDPDGLIFAAGVESQAITLYDLRAF
DKGPFASFETRFNRACDWTGLRFSNDGKQILISTNGGMIRILNAFNGSVLHTFSGYNNSK
GIPLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGPINTLQFNPRYMTFAS
ACTQMMFWLPCVDVL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagatcacagacggcgtgctgcggagtttcagggttgccaggacatatggagaaaat
tcaaagaaagtcaactgtgtggatttcagcccaaatggcgaaaatgcaatatcaagcagt
gacgacgactgcattgtgttatatgacatccgggaaggaaaacctcagaggaccctgtac
agcaagaagtatggagtggacctgattcgctacacacatgaagatacacagacagtggtc
tacagctccaataaactggacgataccatcagatacctgtcactcagtgataacaagttt
atcaggtatttcccgggtcacactgcaagagttatctctctttccatgtcaccagtggat
gatacatttatctctggctcattagataagacaatccgaatctgggacctgcgctctcca
aactgtcggggtcttactaatccactgggtaaacctgtatgttcctttgaccctgatggt
ctgatatttgctgctggggtagaatctcaggccattacgttgtatgaccttcgtgctttt
gacaagggtccttttgcctcttttgaaacaaggtttaatcgtgcctgcgactggacggga
ctccgattcagtaacgatgggaaacagattctcatctcaaccaatggaggaatgattcgc
attctgaacgccttcaatggatctgtgctacacaccttttctggctacaataacagtaaa
ggcattccccttgaggcctgctttactcctgactcacagtttgtcatgataggttcggag
gacgggagagtccacgtttggagcacggagagcggaatgaaggtggctgtgcttgatggg
aaacatccgggacccatcaacactctgcagtttaaccccagatacatgacatttgccagc
gcctgcactcaaatgatgttttggctcccgtgtgtggatgtgctatag

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