KEGG   Labrus mixtus (cuckoo wrasse): 132978009
Entry
132978009         CDS       T10666                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lmix03009]
    132978009 (rrp9)
Ribosome biogenesis [BR:lmix03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    132978009 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_WDR75_2nd PEP5_VPS11_N WDR54 WD40_like Beta-prop_RIG_1st VGLL4
Other DBs
NCBI-GeneID: 132978009
NCBI-ProteinID: XP_060898972
LinkDB
Position
7:12175362..12181366
AA seq 485 aa
MSSSFFIKKKETPTFMKKGKNTTGPKRKGDVDSVGKSKAPAKKSSKYNEEISSDSETESP
VVPRKRQSKEQTDYDETPQEKKLRLAKLYLDQLKEEEEKKAEDESFETDLIAGRLQEEVL
EQKGMLQRLLAKELIPPDASEIRLLRGHKLPITCLVISSDDKFIFSAAKDCFIIKWDVES
GKKLHTVPGGRKGTEDRHVGHTAHILCMAISSDGKYLATGDMNNLIMIWEAETCKHLYKF
TGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDSLSRERC
VTAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKP
LSTVKQAHGCHGDAGLEQPHWVASVAALQNSDTVASGASGCSHNSQVQLWKCGQNYRGLE
PLFSIPVPGFINSLKFSSSGQFLVAGVGQEHRLGRWWRIKEAKNGIYVIPLKRKPPNPEE
DKINE
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtcttcgtctttctttataaagaaaaaggaaacccctacatttatgaaaaagggaaaa
aacacaactggaccaaaacgaaagggcgatgtggactcagttgggaaaagcaaagctccg
gcaaagaaatcatcaaaatacaacgaagagatttcaagtgactctgaaacagaaagtcct
gtagtgcccaggaaaagacagtccaaagaacagactgattatgatgaaacaccacaggag
aaaaagctgagattagccaagctgtacctcgatcagctgaaggaagaagaggagaagaaa
gcagaagatgagtccttcgagaccgatctgattgctggcagacttcaagaagaagtgctc
gaacaaaaagggatgcttcagcgtcttcttgccaaagagctcattccaccagatgcgtca
gagatcagactgttaagaggacacaaacttccaatcacctgtttggtcatctcctctgac
gacaagttcatcttttctgctgctaaagactgcttcatcatcaaatgggatgttgagagt
ggaaagaaactgcatacagtacctggtggaaggaaaggtacggaggatcggcatgtagga
cacacagcacatattttgtgtatggccatttcatccgacgggaaatacttggccactgga
gacatgaacaatctgatcatgatctgggaggcggagacatgtaaacatctttataaattc
acaggacacaaaggccctgtgtcgggtctttcattcaggaaaggaactcacgatctgtac
agcgcgtctcatgatcgctcaataaaggtgtggaatgtggacgagaacgcttacgtggaa
actctattcggacatcaggacgccatcacagggctggacagcctgagccgagaacgctgt
gtgaccgcgggagggagggaccgctcagtgagggtgtggaaaatagctgaagaatctcag
ctggtgtttcacggacacgagggttcaattgattgtatccagctcataaatgaagagcat
atgatcaccggagctgatgatggctccgtgtctctttggagtgtcaacaagaagaagcct
ctcagcacagtgaagcaggctcatggttgccatggtgatgcagggcttgaacagcctcac
tgggtcgcttcggtagcggcgcttcagaactcggataccgtagcctcaggtgcctccggc
tgttcacacaactctcaggtgcagctgtggaagtgtggtcaaaattacagaggactggag
cctttattcagcatacctgtgcctggcttcatcaacagtctgaagttttccagctccggt
cagttcttggtggcaggagttggacaggagcacaggttgggtcgatggtggagaataaaa
gaggccaagaatgggatatatgttattcctctgaaaagaaaaccacctaatccagaggaa
gacaagataaatgaatag

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