Labrus mixtus (cuckoo wrasse): 132978206
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Entry
132978206 CDS
T10666
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132978206 (smarcd1)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132978206 (smarcd1)
PBAF complex
132978206 (smarcd1)
GBAF(ncBAF) complex
132978206 (smarcd1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132978206
NCBI-ProteinID:
XP_060899318
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Position
7:17327346..17341693
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AA seq
515 aa
AA seq
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MAARGGFQSAPTAGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSAAQNHMYRSPMPGP
GYPRPGMPPSSRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPNQIQQVQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVSNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcggcaccgacggctggtggtggtggtggagcaatg
ggaccaggacctccggtaccgggcgcaggaccaggcatgggccccgggactccttctgga
aggatgggaccgtcgtcggcggcgcagaaccacatgtaccgctccccgatgcccgggcct
ggctacccgagaccaggcatgcctccatccagccgtatgacacctcagggaccagccatg
ggcccccccgggtatggcaacagtccagtgtctcgccctgtgatgcccggcgtgatggac
ccgtctcgcaagaggcccgcccccaaccagattcagcaggtgcagcagcagaaccgcaac
cagcacacgaagaagaagaagatggctgataaaattctacctcagaggatcagggaactg
gtcccagagtctcaggcttacatggatctgctggcttttgaaaggaagctggaccagacc
atcatgcgcaagagactggacattcaggaggctctaaagaggcctattaagcaaaagaga
aagctccgtatcttcatatcaaacaccttcaacccggccaagcccgatgctgaggatgga
gaaggcacagtggcatcgtgggaactgcgtgttgagggccgcctgctggaagatactgct
gtgtccaagtatgaagccaccaaacagaagaggaagttctcctctttctttaagtctctt
gtgattgagttggacaaagatctgtacggcccagataatcaccttgtggagtggcacaga
actgccaccacccaggagactgatggcttccaggtgaagaggcctggtgatgtgggggtc
cgctgcaccgtcctgctcatgcttgactaccagccccctcagttcaagctggaccctcga
ctggctcgtatgcttggcatccacacccagaccagacctgtcatcattcaggccctgtgg
cagtacgtcaagacccacaaactccaagacccccatgagcgcgagttcataaactgtgac
aaatacctgcagcagatctttgagactcagcgaatgaagttctctgagatcccgcagcgc
ttgcatgcactcctgatgcccccagagccaatcatcatcaaccacgtgatcagtgtggac
cctaatgaccaaaagaagactgcatgctatgacattgatgtggaggtggatgacacactg
aagacccagatgaactccttcctgctctccacggccagtcagcaggaaatagcaggactg
gataacaagatccatgaaaccattgagaccatcaaccagctgaagactcagagagaattc
atgttgagttttgccagagatcctcagggctttatcaacgactggctccagtcccagtgc
agagacctcaagactatgaccgatgtggtctcaaacccagaagaagagagaagagcggag
ttttactaccagccgtgggctcaggaggccgtctgtcgctacttctactccaaggtccag
cagaggcgacaggagctggagcaggcgctcggcatcaggaacacctaa
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