Labrus mixtus (cuckoo wrasse): 132978390
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Entry
132978390 CDS
T10666
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132978390 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132978390 (lamc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Crescentin
EGF_Teneurin
Alanine_zipper
DUF6061
Death
Motif
Other DBs
NCBI-GeneID:
132978390
NCBI-ProteinID:
XP_060899546
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All DBs
Position
8:complement(29807146..29869996)
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AA seq
1593 aa
AA seq
DB search
MPSMIRALVALSWVAVCVRAAMDECSDEQGSPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDSRDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGPWVPYQYYSGSCEKTYQKAGRGFIR
TGEDEQHALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNGGGRLVCNCKHNTEGDD
CNVCKPFYNDRPWRRATSDNPNECLQCDCNGKSAQCYFDTELYRATGHGGHCRNCADNTD
GPNCERCLDNYYRDQSGARCLPCGCNTVGSESPQCDNRGVCACKPGVTGEKCDRCQPGFH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKENVEGFSCDRCKLGYFNLDPNNPQGCTPC
FCFQHSSVCDSAEGYSVHTVSSAFNRDDEQWTAQQRDGSSVSVQWSPSGQEISLISEDYF
PMYFIAPEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGADLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHSDFQKLLHNLTAIKIRGTYSERSAGYLDDVSLVT
ARRGPGVPARWVERCTCPQGYQGQHCEQCTVGYRRARPELHAFSSCEPCNCNGHSEACDP
GSGACDCRDNTAGLSCERCKDGFYGDATRGTSGDCQPCPCPAGATCAVVFKTKEVVCTNC
PAGTTGKRCELCDDGFFGDPLGQSGPVRVCRACKCSDNIDPNAVGNCNRETGECLKCIYN
TDGFFCDRCKEGFYGNAVSPNPADKCKSCSCSPLGTVGRQTGCSQVTGQCPCLPNVAERD
CSACQPGFFNLQSGNGCERCNCNPIGSTNGQCDITSGQCECQPGVTGLQCERCEVNFFGF
SASGCKPCDCDPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSGRDTVSDKAFEDRMKEAEKAIMELLEEAQTSKDV
DRGLLDRLNNINSTLTTQWNRLQNIRNTVDNTGTQADRARSRVRDAEDLIDRARQELDKA
RDAISKVDIKPPSTGDPNNMTLLAEEARTLADKHKMDADQIEKIAKDANDTSTKAYNLLL
KTLDGESKTSQEINELNKKYNEAKELAKNLENQANKVQAEAEEAGDKALKIFANLTSIPA
LDTKALEDEAKKIKKEASDLDKLIDKTEKEYNDLRDDLKGKEQEVRKLLDKGKSEQQTAD
QLLARADAAKALAEEAAKKGQSTFREAESILEDLRDFDKRVNDNKTAAEDALKKIPEIKA
IIIAANDKTRQAEAALGNAANDARDAKNKAEEAEKIASNVQKGSAKTKQDAEKAFQETNK
LDGEVDDMMDQLSTAERELASKKAAADLDMMMAGMASDNAKEAEDNARKAKSAVKTVLST
ITALLDQLGNIDKVDLSKLNQIEESLKSAKGKMANNELDRKLSELNDVARSQEDLIFDYD
RQIREIRSDILNLEDIKKTLPEGCFNTPSLERP
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtatgatccgggctctggtggccctgagctgggtggcggtgtgcgtccgcgcc
gccatggacgagtgttcggacgagcagggctccccgcagcgctgcatgcccgagttcgtt
aacgccgcttttaacgtgacggtggtggccaccaacacctgcggctctccgcctgaggag
tactgtgtgcagaccggagccaccggagtcaccaagtcgtgccacatctgcgactcccgg
gacccacggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggacact
acctggtggcagagccagaccatgctggccgggattcagtacccgaactccatcaacctc
accctgcacctcggtaaggccttcgacatcacctacgtgcggctcaagttccacaccagc
cgcccggagagcttcgccatctacaagcggacgagggaggggggcccctgggtgccgtac
cagtactacagcggctcctgcgagaagacttaccagaaggcgggtcgaggcttcatccgc
accggagaagacgagcagcacgcgctctgcaccgacgacttcagcgacatctcgccgctc
accggggggaacgtggccttctccacgctggagggccggcccagcgcctacaacttcgac
aacagccccgtcctgcaggactgggtgaccgccacagatatcagagtgaccctgaacagg
ctcaacacgttcggagacgaggttttcaacgaccccaaggtcctcaagtcctactactac
gctatctccgacttcgctgtgggaggaaggtgtaagtgtaacggccacgccagcgagtgt
gtgaagaacggcggtggacggctggtgtgtaactgcaaacacaacacggagggcgacgac
tgcaacgtctgcaaaccgttctacaacgaccggccgtggaggagagcgacctctgacaac
cccaacgagtgtctgcagtgcgactgtaacgggaagagcgcccagtgctacttcgacacc
gagctgtaccgggccacgggtcacggaggtcactgcagaaactgtgccgacaacacggac
gggcccaactgtgagcgctgcctggacaactactacagagaccagagcggcgcccgctgc
ctgccctgcggctgcaacaccgtcggctcagagtctccgcagtgtgacaacagaggagtg
tgcgcgtgtaaacccggagtgaccggagagaagtgtgaccgctgccagccggggttccac
agtctgaccgaggccggctgcaggccgtgctcttgctcgccctcaggcagcactcaggag
tgtgacgtgaacacaggacagtgtcgctgcaaagaaaacgtggagggattcagctgtgac
aggtgtaaactcggctactttaacctggaccccaacaaccctcagggctgcacgccgtgc
ttctgcttccagcactcgtctgtgtgcgacagcgccgaaggatacagcgtgcacaccgtc
agctccgccttcaacagagatgatgagcagtggaccgctcagcagcgcgacggctccagc
gtctctgtccagtggtctcccagcggacaggaaatctccctcatctcagaggattacttc
cccatgtacttcattgccccagagaagttcttggggaaccagatgctgagttacggacag
aacctgagtctgagtttccgagtcgaccggcgggacacccggctgtcggcggaggatctg
gtcctggagggggcggacctgcgggtggccgtcccgctcatcgcccagggtaacgcctac
cccaacgagaacatgcagacctacgtgttcaggctacacgacagcactgattacccctgg
aggccgaccatcagccactcagatttccagaaacttctccacaacctgacggccatcaag
atccgcggaacgtacagcgagaggagtgccggttaccttgacgatgtctccttggtgacg
gcgaggcggggtccaggtgttcctgcgcgctgggtggagcggtgcacctgtccccagggt
taccagggtcagcactgtgagcagtgcactgtgggataccgccgcgcacgcccggagctg
cacgccttcagctcctgtgagccctgcaactgtaacggccacagcgaggcctgcgacccc
ggctcaggtgcgtgtgattgtcgggacaacaccgctggtttgagctgtgaacgctgtaaa
gacggtttctatggcgacgccactcgggggacatcaggtgactgtcagccgtgcccctgt
cctgccggagcgacctgcgctgtcgtctttaaaaccaaagaggtggtgtgtaccaactgt
cccgcaggaaccacaggtaagcgctgcgagctctgcgatgacggtttcttcggcgaccct
ctcggtcagtccggtcccgttcgagtctgccgcgcctgcaagtgcagcgacaacatcgac
cccaacgcggtcggaaactgcaaccgtgagaccggagagtgtctgaagtgcatctacaac
accgacggcttcttctgcgaccgctgcaaggagggtttctacggcaacgctgtgtcaccc
aacccggccgacaagtgcaaatcctgctcctgctctccgttgggcaccgtgggccgtcag
acgggttgttctcaggtcaccggtcagtgtccgtgtctccccaacgtggccgagcgagac
tgcagcgcctgccagcccggcttcttcaacctgcagagcggcaacggctgtgaacggtgt
aactgtaatcccattggctctaccaacggtcagtgtgacatcacctccgggcagtgtgag
tgtcagccgggcgtcaccgggctgcagtgcgaacgctgcgaggtcaacttcttcggcttc
agcgcgtctggatgcaaaccctgcgactgcgaccccgagggctctcagtcgggtcagtgt
aaggaggacggtcgctgtgagtgtcgcccgggcttcgtcggcgcccgctgcgacatgtgc
gaggaaaactacttctacaaccgctcggctccgggctgccagcagtgcccctcctgctac
agtctggtcagagacaaggtgaaccagcagaggcagaagctgcacgacctgcagactctg
atcgataacctgggctcgggtcgggacacggtcagcgataaggccttcgaggatcgcatg
aaggaggcggagaaagccatcatggagctgctggaggaggctcagaccagtaaagacgtg
gaccgaggcctgctggaccgtctgaacaacatcaacagcactctgaccactcagtggaac
cggctgcagaacatccgcaacaccgtggacaacaccggcacgcaggccgaccgagcgcgc
agccgagtgcgagacgccgaggacctgatcgaccgagcccggcaggagctggacaaggcc
agggacgccatcagcaaagtggacatcaaaccgccgagcaccggagatccaaacaacatg
acgctgctggctgaggaggcgcggacactggccgacaagcacaagatggacgccgaccag
atcgagaaaatcgccaaagacgccaacgacacgtcgaccaaagcgtacaacctgctgctg
aagactctggacggagagagcaagacgagtcaggagatcaacgagctcaacaagaagtac
aacgaggcgaaggagctggctaagaatctggagaatcaggccaacaaggttcaggctgag
gctgaggaggccggggacaaagctctgaagatattcgccaacctgacgagcatcccggcg
ctcgacaccaaggctctggaggatgaagccaaaaagatcaagaaggaggcgtcggacctg
gacaagctgatcgacaagacggagaaagagtacaatgacctgagagacgacctgaagggc
aaagagcaggaagtgcgcaaactgctggacaaaggcaaaagtgagcagcagaccgccgat
cagctgttggcccgagcggacgccgccaaagctctggcagaggaggcggcaaagaagggt
cagtccacgttcagagaggcggagagcatcctggaggatctccgagacttcgacaagcgt
gttaacgacaacaagaccgccgctgaggacgccctgaagaagatccccgaaatcaaggcc
ataatcattgctgccaacgataagaccaggcaggcggaggcagcgctcggcaacgcggcc
aacgacgcccgagacgccaagaacaaggccgaggaggcggagaagatcgccagcaacgtg
cagaagggctcagctaagaccaaacaggacgccgagaaggccttccaggaaaccaacaag
ctggacggggaggtggacgacatgatggatcagctgagcaccgctgagcgagaactggcc
agtaagaaggccgcggcggacctggacatgatgatggcggggatggcgtcagacaacgca
aaggaggcggaggacaacgcccgcaaggccaagagcgccgtcaagaccgttctgagcacc
atcaccgccctgctggatcagctgggaaacatcgataaggtggacctgagcaagctgaac
cagatcgaggagtccttgaagagcgccaagggcaagatggccaacaacgagctggacagg
aaactgagcgagctgaacgacgtggcgagaagccaggaggacctgatcttcgactacgac
cggcagattcgcgagatccgcagcgacatcctcaacctggaagacatcaagaagacgtta
cctgagggctgcttcaacacgccgtccctggagaggccttaa
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