Labrus mixtus (cuckoo wrasse): 132978528
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Entry
132978528 CDS
T10666
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04510
Focal adhesion
lmix04512
ECM-receptor interaction
lmix04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
132978528
Glycosaminoglycan binding proteins [BR:
lmix00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132978528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132978528
NCBI-ProteinID:
XP_060899715
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Position
8:15281708..15305368
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AA seq
1665 aa
AA seq
DB search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NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcccgtctctataatctgcctgatactgtttgctgtcgcggtgttgggcact
ggggccaaaaactgtgtatgcaatggaaaatcaagatgccactgtgaaggactgaaggga
agcaagggagagcgaggtttaccaggagagaaaggtctccaagggccatatgggcgtcca
ggaccagatggtcatgctggacaaatgggacaaaagggtaacattggacctgaaggattc
tttgggccaaaaggcggtcaggggccaaaaggcaaagacggatttgctgggtctcatggt
ttaccgggtatcccgggtttacaagggcctccaggagcccaaggggcctcaggctgcaat
ggaacagatggagacgatggatttcctggtattcatggggcccatggcattgatggacat
ccaggtgaatccaggttgtcagtgaacgcatcaccagggccacctgggccgcctgggagg
gatggagagccgggagatcagggtgtccgtggagagtatggaccaccagggaaccctgga
ccacagggctctgctgggtctcttggacgtcaagggcaacctggatttaagggtcaagaa
ggatcaggtggtgtaacgggacctcgtggtctaaagggtagacaaggaccagtaggtcca
ccggggcctccaggtcggatcaaagattatcacactgggagttcatcgttaaagggtgat
aaaggacaccaaggggatttaggagaaaagggttgcaagggtgatccaggagaccctggt
gatggtttctcctctaaaggaacaaagggagacaaaggactggagggcccagaaggaaag
tcagggaaggctggtgaccctggacaacctggaaataggggcagatctggccgcagaggt
gatctgggatattcagggacaccaggagggatgggtgaaaagggaaatacaggtctccct
ggtccacctggagatcagatacttgggcctgtgatggaagcacttaaagggtaccccgga
gatcctggccccccaggccaacatggactccctgggcagcaaggtgttgttgggtttcct
ggacctgatggacctccaggccaggcaactgggagctatgtgccaggaccacagggtccc
catggctttccaggcccaaaaggagaccctggggagccaggggctatttattcaggactt
ccaggtctggatggagatccaggtgaccaagggcgtcctggggatgtgggcccacctgga
ctacctgaagacaaaactaacagggtcatcaagggtctcccaggcctgaagggagtgagg
ggtgagcctggaccacatggatatgatgggagatttggaatgaaaggggggaagggggag
ccttgttttgagtgtttcacatcaggaccacctggaccaccgggtccccgcggtccaccg
ggtggcccaggcattaatccaggaccaggggctaaaggagatccaggcatcccaggacct
agaggctctcctggaataccaggccctagtggtggaattggatttccaggttctcctgga
caaaaaggagattcatcttcctacgacacccctgggattaagggaaacacaggagaccca
ggacagcctggcaggcctggttcggatggcctccctgggtttcctggcctatctggtcgc
aaaggtgatcaaggacctccgggggattcgtatcctttccatggggcagagggagaccgt
ggtttccctggttcaccagggcctttgggcagaccaggaccagttggtaaccctgggcca
gtagggtttgggcctgctggatatccaggaagtaagggagatgttgggctacccggcctg
ccaggacagtctggaattccaggccagaaaggggagccaagccacatccacatcatagga
cgtcctggacctcctggatttaaaggtctacctggcatacctgggagcccaggtaatgat
ggagtgccaggtatcctaggaaatccaggttttccaggacagaaaggagacacaggtgat
gtttcatttccaggagggcaaggggaaacaggacttaaaggtgacaaggggcggccaggt
ccattaggccttcaagatcggggcttccctggtcagccaggtccacaaggtcctcctggt
tctccaggaccgaagggtgatggtggccctggataccttggtcctcctggagcccaaggg
cctccaggagtagacggggatcaggggcctgtgggagatcctggccatcctggcaaacct
ggaaacccaggactaaatggcaattctggatttcccggaaaaaaaggatataaaggttct
gtaggcccccctggactacctggtgataaagattcttgcaaaggtgaacctggaccaagg
ggagaaccaggaccagatgggtatccaggacatccaggacctaacggctcgcccggtgag
aagggaaatgcaggtttgccagggtctggtcgtcctggcgcccctggtgggccaggtctc
atcgggccatcagtaccaggtccacatgggcttcctggacaaaaagggttaaggggacaa
agtggtctgcctggtgaaccaggacaaacaggagaccctggaccagatggggtaccggga
tatggaccagatggattacctggaatttcaggaccaccaggccaaattggtgaccctggc
ccggatggagcaagaggatccccggggcccccaggcatgaatggggaaacaggtccccaa
ggtatcccgggccctacatcgccgccaccagtagacatcattttgggccccccaggagac
cctggtgacctgggttactctggtctgcctggccctcggggaaacaatggaagaatggga
ccagccgggcagagagggagaggaggagcaccagggggccctggagaaagaggtccccca
ggtgatccaggtattgatggatcaacttcagagggaagaccaggacctgctggagcccta
ggagatccaggtgtcagagggcataccggtccaaaaggattaaaaggagatcatggaatc
catggagcacctggtcctgatggtgcaccgggtcgaactggtcccaaaggaataactgga
gagccaaactaccatggatatggaaggcctggacccattggacaaaagggtgaaccaggg
ctgactaatacaaatgcgatgaagggtcagaaaggtgaaccaggtttttttggaccatca
ggaataccaggaaaccgaggagctaaaggaaacccaggacctgtgggacaaaatggtcca
ccaggctaccagggacctaaaggttcagacgggcctccaggatgcaaaggacgcccagga
cctaatgtaccaggtaatccaggtgtgccgggtgttgtcagttatgcaggtccaaaaggc
aaccagggccgggatgggatccctggaccaccagggcaaaaaggagagatgattttaaca
gaagggacacctggcagacgtggacatccaggtcaaccaggtccctctgggaacactggt
cctcctggtttatctgttacatctccagttgggcccataggagaccaaggatccccaggt
ccacctggggcccctggttcgaggggactaccaggaaaagagggcccttgtgttcctggg
tcaaaaggagaccgtggctttcctgggacagctggtggcccaggttttcagggtccacct
ggtcctccagggcctacagtgcctgggttcaaaggagaaatagggaactcaggtcctaca
ggaagcccaggctatagtggaccaccaggagatccaggccctcaaggaccttctggtgaa
agaggcagacctggagtcctgggaccaagaggtgattccggtcctccaggaatccaaggc
cctcctggtgaaagaggagaccctggatacacccaaggcccacctggcccacctggggtg
aaaggttttcctggacgacctggcttaaagggcagacaagttattggcaaggtgatacaa
gaacaaggagatcctggctttcctggaccccctgggaataaaggggcccaagggagccct
ggacctccaggaccagtaggccaaccaggtcagccaggcgtcaaaggacagcgtggcccc
agcccagcaggccagccaggatttattggctacaaaggcgacaaaggaagaggaggactg
tcaggtttggaaggacctcctggaaatccaggcagcaagggtcctccagggttgccaggc
agagctacttcaggttatgctgacagtttcctgttcgctcgacacagtcagagtatgttg
gtacctgaatgccctcatggcagcagccttatctattctggttactccttcctcttcatc
aatggcaatgagagagctcacggccaggaccttggcacctctggaagttgtctccctcgt
ttctccaccatgcccttcatgttctgtgacactgaaactaactgccgctatgcttctcgt
aacgactactcctattggttgtccaccagcgagcctatgccggccaacatggtttccatc
acaggagacaggctggcatcctacatcagcaggtgctcagtgtgtgaaatcacctccaat
gtcatatccgtgcacagccaaacaactctggtacctgtatgtcccagcggctgggattcc
ctgtggactggatactcatttgtcatgcaaacgggtgctggagcagagggctcctcccag
cccctggtgtctcccggctcatgtctggaaagtttccgccaagtgcccttcatcgagtgt
cacggcagggggacgtgtaactattaccctgactcctatagctactggctgtcctcccta
gaccccaacaatatgttcagtaaacctgttcctcggacagtaaagggaccctctctacaa
agcgtcatcagtagatgccgtgtctgcaggaaactatggcaaaatagtcgagacaaccct
cgtggggacaacttttaa
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