Labrus mixtus (cuckoo wrasse): 132978654 Help Entry 132978654         CDS       T10666                                  Symbol cop1 Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism lmix  Labrus mixtus (cuckoo wrasse) Pathway lmix04115   p53 signaling pathway lmix04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:lmix00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     132978654 (cop1)  09140 Cellular Processes   09143 Cell growth and death    04115 p53 signaling pathway     132978654 (cop1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:lmix04121]     132978654 (cop1) Enzymes [BR:lmix01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      132978654 (cop1) Ubiquitin system [BR:lmix04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     132978654 (cop1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      132978654 (cop1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX DSE1_N ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_like WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 PAC11 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR41 zf-rbx1 WDR90_beta-prop_4th zf-RING_10 RING_ZNF598 UvrD-helicase RING-HC_RBR_RNF216 zf_C2H2_10 zf-C2H2_AcuF zf-C3HC4_IRF-2BP1_2 Motif Other DBs NCBI-GeneID:  132978654 NCBI-ProteinID:  XP_060899883 LinkDB All DBs Position 8:5075088..5092587 Genome browser AA seq 702 aa AA seqDB search MSGGRPQQSSVPSTSSSSTGGTGSNAVPSNGNNAANVVPSSRTLAAAAGEGTGLSVPTLA AVPSSRAGFASLSRPTATSGSRKKSLHQAPLYNGLLNSYEDKSNDFVCPICFEMIEEAHM TKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQRSEEKRLKLD HPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILMEFLKEAR RNKREQLEQLQKELSFLEDDIKRVEEMSGLYSPMMESECTVPNVEAPSPAPSCSSIIDPP DYSQPPGFGGATQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEGRNLNQL DDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFE YGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVY QEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRY HLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNK PHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDK DKKEDDTNEFVSAVCWRAMPDGESNVLIAANSQGTIKVLELV NT seq 2109 nt NT seq  +upstreamnt  +downstreamnt atgtcaggcggccggccgcagcagagctcggtgcccagcaccagcagcagcagtacggga ggcaccgggagcaacgccgtcccgagtaatggaaacaacgctgcaaatgttgtgccctcc tccaggaccctggcagcagcagccggagagggcaccggcttgtcggtgccaactttggcc gccgtgccctcgtcccgggccgggtttgcttctctgagcagaccgacagcgacctcaggg agcaggaagaaatctctccaccaagcacctctttacaacggcctcctaaactcttacgag gataaaagcaacgactttgtctgtcccatctgctttgagatgattgaggaggcacacatg acaaagtgtgggcacagcttctgtttcaagtgtatccgtcagagtctggaggacagcaac agatgtccaaagtgtaactatatcgtcgataacgtggatcagctttacccaaactttctc gtaaatgaactgatccttaaacagaagcaaaggtccgaggagaaaagattaaaattagat catcctaacggctccaggtggcaggtgtttcaggacgtgttgagtcctgaccaggagaac ttggacctggctaatgtcaatctgatgctggagctcctggtccagaagaagaagcagctg gaggcggaatcccaagcagctcagagacagatcctcatggagttcctgaaagaagccaga agaaacaagagagagcaactggagcaactacagaaagagctcagcttccttgaagatgac atcaagcgtgtcgaggaaatgagcgggctgtactctcccatgatggagtctgagtgcacg gttcctaatgtggaggctccctctccagctcccagctgcagtagtattattgatccacca gactacagccagcctcctggatttggtggagcgacccagggcaagagacagacgtggtac aacagcacactggcgtcgaggaggaagaggctgacggctcattttgaagatttggagcag tgctacttctccaataagatgtcacgcatcacagatgaaggcaggaatctgaaccagctt gatgatttcatggagtgtctgtccaagtttactcgttacaactctgtgaggccgctcgcc accctctcctatgccagtgacctctacaacggctccagtattgtttccagtatcgagttt gaccgtgactgtgactactttgccatcgctggtgtgaccaagaagatcaaagtgtttgag tacggcacggtgatccaggacgcagtggacatccactaccccgttaatgagatgacctgc aactctaaaatcagctgtatcagctggagcagctatcacaagaacctcctggccagcagt gactacgaggggactgtgatcctgtgggacggcttcaccggccagaggtccaaagtctac caggagcatgaaaaaagatgttggagcgttgacttcaatctgatggacccgaagctgtta gcctcgggctctgacgatgctaaagtgaagttatggtccaccaatctcgacaactcagtg gccagcatcgaggcgaaggccaacgtctgctgtgtcaaattcagcccgacctccaggtat catctggcgtttggctgtgcagaccactgcgtccactactacgatctacgcaacaccaag cagccaatcatggtgttcaaaggccacaggaaggcggtgtcctacgccaagtttgtcaat ggagaggaaatagtctctgcctcaacagacagtcagctgaagctgtggaacgtcaacaag cctcactgcctgcgctccttcaagggtcacatcaatgagaagaactttgtgggcctggcc tccaatggagactatgttgcctgcggcagtgaaaacaactccctgtacctgtactacaaa ggactttccaagacgctgttaacgttcaagtttgacacggtgaagagcgtcctggacaag gacaagaaggaagacgacaccaacgagtttgtcagtgccgtctgctggagagccatgcct gacggagagtcaaatgtactgattgctgcaaacagtcaaggaacaattaaggtgctagag ctcgtctga

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