Labrus mixtus (cuckoo wrasse): 132978746
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Entry
132978746 CDS
T10666
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132978746 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmix03036
]
132978746 (chd8)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132978746 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
Chromo_MIT1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
132978746
NCBI-ProteinID:
XP_060900017
LinkDB
All DBs
Position
8:8117215..8139340
Genome browser
AA seq
2563 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFTQGSSDPVEEALKLALGHVDPPAEPELTVNTGPNA
PAVAPVIPAPVLVPVHAPTQQPVPVVTAQTVSIAAAPTVATIPVDTVPQIQAQTTIPIVS
NPSVVPSSTVLLSSLTVSSPSVTTTTATTPHLTQITHQLTPQQLAAITQQAGGKIVILKG
PQGQAQVLQTVSGAAGQTGGKVIRVLSGTPLKPGMSILQGGAVLNQASQGQAQVKMSAAG
VQRLIQSPNGPVKQMLLTSMPQQSQGQQVQVQIPAQAQIAQGQTQVQVQPQTTQIQVQTQ
GQVQLQPAMTAQTQGGEAKRITLVLQQPSQTAGSAGQHQVTQVHQVQAGQQQGQTRLVLG
QLPGGKLVLQGSQLAALTQARAAGQAGGQPKVLTIQLQVQQQPNQQGGVKYQLVSGAGNT
GSPQVLQISQGQGGQRVAVPLKMLLQPQTSSATSAGGTVSVVKVINSSAGPSATTTTQSQ
AIRITKAPGEPASVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELPSSQTS
TEAGGTVTVVSSAKKKSSGGGSKKKSPVAGATTPKTPGGADKKGKAKTPGGTPGVAGGTV
TPVAGNKSKSKVKTNTITLVGAKKRKRNASSDHSDGEMSPASPAALEEDLITRRSNRVVK
RKKYTEDLDIKITDDEDEQEDVDVTTTAAAVASISGSTAAQLKQELELDADGQPSMQFFV
ENPSEEDAAIVDKVLSLRLTKKEVTQGQYTTVEEFFVKYKNYSYLHCEWASLEQLEKDKR
IHQKLKRFRTKHAQMRHLFQEEEEPFNPDYVEVDRILDVSHSVDKDNGEPVVYYLVKWCS
LPYEDATWELKEDVDEGKVEEFGKIANRQPRLKRTARPPAASWKKLEETREYKNGNTLRE
YQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITLLSEIYSAGIQGPFLVIAPLSTITN
WEREFTTWTDMNAIVYHGSLASRQMIQQYEMYSKDDKEHLIPGAYKFDALITTFEMILSD
CPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHF
LEPAQFPSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVEL
TDVQKKYYRAILERNFSFLSLGANSNHNVPNLLNTMMELRKCCNHPYLINGAEEKIVAEL
REVYDPMAADFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINK
RYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWN
PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKDKE
GANGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESEGKGS
TFSKASFVASENRNDIALDDPEFWQKWAKKADIDMDTINRKNTLVIDTPRVRKQTRQYSS
LRGEGGDLSDLDSDDEYPPANSRQSRASRRADRHSGGGYGRTDCFRVEKHLLVYGWGRWR
DILSHARCKRRLSERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGRQPQTLLN
HSGLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKVLLRV
RMLYYLKQEVIGEHSESVLKGAEIRDLDIWMPEMEQQEFPAGWWDGEADRSLLAGVFKHG
YEMYTTMRADPCLCFLERAGRPDDKAIDAEQHTGDAELGDDADFDKYSEDPEFKPATRHA
KDLFEEPDSMNVDDEISVEDKAGPVVIENVSSQSGSCDWPSSSSLTARLRRLITAFQRSY
RQEQLKMEAEAKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVEKIKK
ELGLQEATDPEFDWNRFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRPGRDEDPSEVP
TAVAPITEERASRTLYRISLLRRLRERVLPHPSLEERLPLAPTSSELPTWWNIPDHDRQL
MLGAALHGVSRTEISIFSDPQFTFVQARDDFIQHQQSLPPPPPPLPQALPVTPLGQLKTE
EDVPGVKEERGEEEALLLGGQISADLQSTPLSHHHSKAAGQGWSLKRSKIRVGKSGGRRK
GEGGSDSDSDSDSGSSSSDRSGSSDDSGESEEETEGAGMKLCDGDEENSLLSMTTSQDGV
PPPDPLRVDWPKDRVLINRLDSLCVLVVSGQWPTGRRYVSEAQLNPTSELTLEEMAYTRV
MRKPSGTPGGPGAEGDDGEFTVKLLKEEGLKLTFSKHAMMPNGSGGESSGRKKRKDQEFS
DPLNDPLERTPRRRDPPTWLKENPDYEVEGDMLELLVNRSKRKRRRRADKALTGSEKVKV
INMRTGKKVGNAFCPMLQDLREYLEENADNAVAPEWSDAVRNSGFLPETFFHRLLTEHSE
IPKKSRRRHHHHHHHHHTPEPTSEDPNLDGVEEETLVSDGAYMMDEEDLETSHHFLTSPD
FDVKMEGGDSLSQGDYDSSDQEALLDDVILAQKDSDSSSSSED
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaatcatggacctctttgaggacacccccctgtttaacctggacgcccta
ccggacgactccttcacgcagggctcctcggaccctgtggaggaggctcttaagctggca
ttgggccacgtagacccaccggctgaacccgagctcacagtcaacacgggccctaatgct
cctgcagtagctcctgttatccctgcccctgtccttgtccctgtccacgcccccacacag
cagccagtaccagtggtgactgctcagactgtttccatagcagcagctcccactgtagcc
accatccctgttgatactgtgcctcagatccaggcccagaccaccatacctattgtcagc
aacccgagtgtggtcccaagtagcactgtcctcctaagctcactgactgtttctagcccc
tcggtcaccaccaccactgccaccacgccgcacctcacacagataacccatcagctcact
cctcagcagctagccgccatcacacagcaggctggggggaaaatcgtcattctcaaaggt
ccccaaggtcaggcccaggtcctgcagactgtttcgggagctgcaggccaaactggtggt
aaggtcatccgtgtgttgtctggtacacctcttaaacctggcatgtccattctgcaaggg
ggggccgtcttgaatcaggcaagccaaggacaagctcaagtcaagatgtctgctgccggg
gtgcagaggctgatacagtctcccaacggaccggtgaaacagatgctgctgacctccatg
cctcagcagagtcaaggccagcaggttcaggtgcagatcccagcccaggcacagattgca
caaggccagactcaagtccaggttcagccccagacaactcagatccaggtccagactcag
ggccaggtgcagctccagccagcgatgacggcccaaacacagggtggtgaagcaaagcgg
atcactttggttctccagcagccttcccagactgctggttcagcgggtcagcaccaggtc
actcaagtgcatcaggttcaggcaggccaacagcagggccaaactagactggtgctgggt
cagctacctggtggcaaactggtgcttcagggaagccagcttgctgccctgacccaggct
cgagctgcaggccaggctggagggcagcccaaagtcctcacaatccagctgcaggtgcag
cagcagcccaaccaacaaggaggagttaagtaccagctggtgtcaggagctggaaacacc
ggcagcccacaggtgttgcagatctcgcagggccaaggaggacagagagtcgcagtgcca
ctcaaaatgctcctgcagccacagacgagttcagcaacctcagccggcggtaccgtctct
gtggtgaaggtcatcaactcgtctgcaggcccctccgctacaaccaccactcaatcgcag
gcaattcgaatcaccaaagcccccggggagcccgcttctgtccgtcgggtggagatcctg
tgcaagcaggagaaagcaaaccgtatcgtagctgaagctatagccagagccaaagcacgc
ggtgaaaagaaccttccacgagtcctgaaccaggacgagcttccatcctcacagacctcg
acagaggcagggggcactgtgactgtggtgtcttctgctaagaaaaagagcagcggagga
ggaagcaagaagaagagtccagtggctggagcaacaacgcccaaaaccccaggaggagcc
gacaaaaagggcaaagcaaagacaccaggaggaacaccaggagtggctggaggaacagtg
acacctgtagcagggaacaaaagcaagagcaaagttaagaccaacactataactctagtg
ggagcaaaaaagagaaaaagaaatgcgtcctccgatcactcggacggggagatgagccct
gcctcacccgctgcgctggaggaagatctgattacgaggcgctccaatcgcgtggtcaaa
aggaagaagtacacagaagacctggacatcaagattacggacgacgaggacgagcaggaa
gacgtagacgtcactacgaccgcggcagccgtggcctccatcagtggcagtacagcagcg
cagcttaaacaagaactggagctggatgccgacgggcagcccagcatgcagttctttgtg
gaaaacccgagtgaggaagatgctgccattgtagacaaagttctctcattgaggttaacc
aagaaggaggtgacgcagggccagtacacaactgtggaggaattctttgtcaagtacaag
aactattcatacttgcactgtgagtgggccagtttggagcagctggagaaagataagaga
atccatcagaagctgaagaggttcaggaccaaacatgcacagatgaggcacctcttccag
gaggaggaggagccttttaaccccgactatgtagaggtggaccggatcctggacgtttct
cacagcgtggacaaggacaacggcgagcctgttgtctactacttggtgaaatggtgctct
ctgccttacgaggacgccacctgggaactgaaggaggacgtggatgagggcaaggtggaa
gagtttggcaaaatcgcaaatcgacaacctcgcctgaagagaacggcacggccgcctgct
gcttcgtggaagaagttggaggagaccagagagtacaagaatggaaacacgctccgagag
tatcaactggaaggagtcaactggctgctcttcaactggtacaacaggcagaactgtatc
ctggcagatgagatgggtctggggaagaccattcagtcgatcacgctgctgtcagagatc
tactccgctggaatccagggccccttcctggtcattgctccgctctccaccatcaccaac
tgggagagggagttcaccacgtggaccgacatgaacgccatcgtctaccatggcagcctg
gccagccgacagatgatccagcagtatgagatgtactctaaggacgataaggagcacttg
atcccaggcgcgtacaaatttgacgccctcatcacaacctttgagatgatcttatctgac
tgcccagagctgagggagatctcctggcgctgtgtgatcattgatgaagctcaccggctc
aagaatcgaaactgcaagctgttggacagtttgaagatgctggatctggagcacaaggtg
ctgttgactggcactcctctccagaacactgtggaggaactctttagtctgcttcatttc
ctggagcctgctcagttcccctctgagactgaattcctccgagactttggagacctcaaa
acagaggagcaggttcagaagctgcaggccatcttgaaacccatgatgctacgaaggctc
aaagaggatgtcgagaagaatttggcacccaaacaggagaccatcattgaggttgagttg
acggatgtccagaagaaatactaccgggccatcctggagaggaacttcagcttcctcagt
ttaggggcaaacagtaaccacaacgtgcccaacctgctcaacactatgatggagctgcgc
aagtgctgcaaccacccctacctcatcaatggcgcggaggagaagattgtggcggagttg
cgggaggtgtacgacccgatggctgctgacttccatttgcaggctctcattcggtcggcc
ggcaaactggtgctgctggacaaactgctgcctcgcctcaaagctggcggtcacaaagtg
ctcatcttctcccagatggtgcgctgcttagacattttggaggactacctcattaacaag
agatacctttatgagcgtattgatggcagagtgcgtgggaacttacgacaggctgccatc
gatcgcttcagcaaacccgactcagaccgcttcgtcttcctgctgtgtacccgtgctggt
ggcctgggtattaacctcactgctgccgacacctgtgtgatatttgactctgactggaac
cctcaaaacgacctgcaggcccaagcacgttgtcatcgtatcggccagtcaaaggcggtc
aaggtctaccgtctgatcacgaggaactcctacgagagggagatgttggacaaagcgagt
ttaaagcttggcctggaccgcgccgtcctgcagagcatgagtggcaacaaagacaaggaa
ggcgccaacgggatccagcagttctcaaagaaggagatcgaggacctgctgaggaaagga
gcctacgccgccattatggatgaaaatgacgaaggcagccgcttctgtgaggaggacatc
gaccagatccttcagcggagagccaccaccatcaccatcgagagcgagggcaaaggatct
acgttctccaaggccagctttgtggcctctgagaaccgcaacgacatcgccctcgatgat
cctgaattctggcagaagtgggcgaagaaagccgacatagacatggacaccatcaatcga
aagaacaccctcgtcatcgacactcccagagtgcgcaaacagacccgtcagtactcaagt
ctgcgaggtgaaggtggtgacctgtctgacctcgacagcgatgatgagtatccacccgca
aactccagacagtctcgagcctcccgacgtgccgaccgccacagtggaggcggttacgga
cgcactgactgtttccgggtggagaaacacctgcttgtatacggttggggtcgctggaga
gacatcttgtcccatgccagatgtaaacgtcgactgagcgaacgtgacgttgagacgatc
tgtcgtgtcatcctggtgttttgtctgctccactaccgaggagatgaaaacatcaagagt
ttcatctgggagctcatcacaccgcccgagaacggacgtcaaccccaaacactactcaac
cactctggtctctctatccccgttccaagaggcaggaagggtaagagggtaaaggcccag
agcacatttgatgttcagaaggtggagtggatccgtaaatacaaccctgacacgctgctc
ctggacgacagctaccgcaagcacctcaaacaccagtgcaacaaggtgttgcttagggtg
cgtatgctctactacctgaaacaggaagttatcggtgaacattcagaatctgtcctgaaa
ggggctgaaatcagggatcttgacatctggatgcctgagatggagcagcaggagtttcct
gcaggatggtgggatggagaggctgaccgctcactgctcgccggcgtcttcaaacatggt
tatgagatgtacaccactatgcgtgctgatccatgcctctgcttcttggagagagctggt
cggcctgacgacaaggccatcgatgccgagcagcacactggtgatgcagagctgggagac
gatgctgactttgataaatactcagaagacccagagttcaagcctgcaacaagacacgcc
aaagatcttttcgaggagcctgactccatgaacgtggacgatgagatctccgtggaagac
aaggcgggaccagtggttatagaaaatgtatccagtcagagcggttcatgcgattggccc
tccagctcgtcactcacagcacgactgcggcggctgatcacagctttccagcgcagctac
agacaggagcagctgaagatggaggcagaggcaaagggggaccgcaggcgcaggcggtgc
gaacaggccagcaagctgaaggagatcgcacggcaggagcgccagcagaggtggacacga
agggaggagtgcgacttttatcgggtggtgtcaacttttggtgtggaaaagataaaaaag
gagctgggtcttcaagaggccactgaccccgagtttgactggaaccgtttccgaaccttc
gctcgtctggacaaaaaaactgatgagagccttagcagatacttccgctcttttgttgcc
atgtgccgcagagtttgccacctgcgcccaggccgggatgaagatccgtcagaggtcccc
acggctgttgccccaatcacagaggagcgtgcgtcccgtactctttaccgtatcagcctc
ctgcgtcgcctccgtgagagagtcctgccccacccttccctggaggagcgtcttcctctt
gctccgaccagctctgagctgcccacttggtggaacataccggaccacgaccgtcagctg
atgctgggtgcagccctgcacggtgtgagccgcaccgagatctccatcttctcagacccg
cagttcaccttcgttcaggctcgagatgactttatacagcaccaacaatccctgccccct
ccgcctccacctctgcctcaggcactgcccgtcacacccctcggccagctgaagactgag
gaggacgtgccaggtgtgaaggaggagcgaggtgaagaagaggctctgttgctcggaggt
cagatcagtgctgacttgcagagtacacctttgagtcaccatcacagcaaagcagcgggg
cagggctggagcctgaagaggagcaagataagggtcggaaaatcaggaggaagaaggaaa
ggagaggggggctcggattctgactctgattctgattcaggatcatcttcatctgaccga
tcgggcagcagcgatgacagtggagagagtgaggaggagacagaaggagcaggcatgaag
ctgtgtgacggggacgaagagaacagtttactgtcaatgaccacatctcaggacggtgtt
cctcctccagatcccctcagggtggattggcctaaggaccgtgtgttgatcaaccgcctg
gacagcttgtgtgtgctggtggtgagcggtcagtggcccacggggcgacgctatgtgtcc
gaggcccagctcaacccaacatcagagctaacgttagaagagatggcctacacaagggta
atgcgtaaacccagtggcacgcctggtggcccgggggccgaaggagatgatggagaattc
actgtgaagcttctcaaggaggaagggctgaagctgaccttctctaagcatgctatgatg
cccaacggctcaggaggagagagcagcggacgcaagaagcgcaaagaccaagagttttct
gacccactaaatgatccactggagcgtactcctcggcgtagggaccctcccacctggtta
aaggagaacccagattatgaggtggagggagacatgctggagcttcttgtgaacaggagc
aagaggaagaggagaaggagggcagataaagctctgacaggcagtgagaaggtcaaagtc
atcaacatgaggacaggaaagaaggttggaaatgctttctgtccgatgttgcaagacctg
agagaatatctggaggagaatgctgataacgctgtagcacccgagtggtctgacgctgtt
agaaactctggcttcctgcctgagaccttcttccacagactgctgaccgaacactcagag
atccccaagaagagccgacgccggcatcaccatcaccaccaccaccaccacactccagag
cccacgtccgaggaccccaacctggacggagtggaagaggagactctggtctcagacgga
gcctacatgatggacgaggaggacctggagacctcccatcacttcctcaccagcccggac
tttgacgttaaaatggagggcggcgacagcctctcccaaggtgactatgacagctcagat
caagaggcgctattggacgatgtcatcctggcacagaaagactctgactcctcgtcaagc
tcagaggattga
DBGET
integrated database retrieval system
