KEGG   Labrus mixtus (cuckoo wrasse): 132978766
Entry
132978766         CDS       T10666                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    132978766
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmix03400]
    132978766
DNA repair and recombination proteins [BR:lmix03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     132978766
SSDB
Motif
Pfam: WD40_Prp19 Ubl_WDR48-Bun107 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_Gbeta DSE1_N Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_DCAF12 ASA1 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_DCAF4 CFAP251_N Beta-prop_Vps41 WD_LRWD1 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_ACSF4 WDR54 PAC11 Beta-prop_NUP159_NUP214 WD40_like RAWUL SHKBP1_KCTD3_C Tfb2_C C10orf126
Other DBs
NCBI-GeneID: 132978766
NCBI-ProteinID: XP_060900052
LinkDB
Position
8:complement(8379053..8390765)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGIHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcctacgtc
attagagatgaggtggagaagtacaaccggaacggggtgaatgcactgcagctagacccc
gcgctgaaccggctcttcacggccgggagggactcaatcatccggatatggagcgtctac
cagcacaaacaggacccatatattgcctcgatggagcatcacacagactgggtcaatgac
atagtcctctgttgcaatggaaaaactttgatatctgcatcatcagatacaacagtcaaa
gtctggaacgcgcacaaaggcttctgcatgtcgacgttacgaacacacaaggactacgtg
aaagctctggcctatgctaaggacaaggagctcgtggcctcggcaggtctggaccggcag
atcttcctttgggatgtgaacacactaacagcactcactgcttccaacaacactgtcacc
acctcgtcactcagcgggaacaaagactcaatctacagtctggccatgaaccagatggga
acagtcattgtatctggatccacagaaaaggttctgagagtgtgggatcctagaacatgt
gcaaaactaatgaagctaaagggtcacacagacaacgttaagtcgctgctgctgaatcgg
gatggcactcagtgtctgtcaggcagctcggacgggaccatccgcctctggtcactcggc
cagcagaggtgtatcgccacctatcgcgtgcacgatgaaggtgtttgggccctgcaggtc
aacgaggccttcacacacgtctattctggaggcagagacaaaaagatctactgcactgac
ctgcgtaacccagacatccgtgtgctcatctgtgaagagaaggcgccggtgctcaaaatg
gaactggacagatctgctgacccacctccagcaatctgggtctccaccaccaagtcatcc
gttaataaatggtctctaaagggaatacacaacttcagatcatcaggggagtatgacaat
gactgcactacccctctgacaccactgtgtactcagccagaacaagtcattaagggaggt
gccagtatcatacagtgccacattctgaatgacaagaggcacatactcaccaaagatacc
aacaacaatgtggctttttgggacgtcctaaaggcatgtaagggtgaagatttgggaaaa
gtggagtttgacgaagagataaagaagcgcttcaagatggtctatgtgccaaactggttt
tctgttgatctgaaaactgggatgctcacgatcactttggatgagagcgactgcttcgct
gcctgggtgtccgcaaaggatgctgggttttcaagctctgatggatcagatccaaagttg
aacttgggtggactgctgctccaggctctgttagagttctggcccagaactcgcatcaac
cccatggacgaggaagagaacgaggtgaaccacgtcaacggagagcaggagaacagggtc
cagaaaggaaatggatatttccaagtgccaccacacacgccggtcatctttggagaagca
ggaggcagaactctatttaggttgctctgtagagattcaggaggagagactgagtccatg
ctgcttaatgagactgttccacagtgggttattgatataactgtagataaaaatatgccc
aagttcaacaaaatcccgttctacctccagcctcactcttcctccggtgcaaaaactctg
aagaaggaccgtctgtccgccagtgacatgctgcaggtgaggaaggtgatggagcacgtt
tatgagaagatcatcaacttggacaacgagtctcagacgacgagctcctcagcaaacgat
aaaccaggggagcaagagaaggaggaggacatggccatgctagccgaggagaagattgaa
ctaatgtgtcaagaccaggttctggatcccaacatggacctgcgaacagttaaacatttt
atctggaagagtggaggggacttgacgcttcactataggcagaagtccacgtga

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