Labrus mixtus (cuckoo wrasse): 132978978
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Entry
132978978 CDS
T10666
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132978978 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132978978 (copb2)
Membrane trafficking [BR:
lmix04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132978978 (copb2)
Exosome [BR:
lmix04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132978978 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
BSP_II
Afaf
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
132978978
NCBI-ProteinID:
XP_060900372
LinkDB
All DBs
Position
8:12760347..12767413
Genome browser
AA seq
951 aa
AA seq
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MPLRLDIKRRLTARSDRVKSVDLHPTESWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMADKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
KDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NQKAAESLADPTEYENLFPGLKEAFAAEHFLRESCLGTTRPAKDYPLVTLNEDRNILEEA
QGYEPKGIFIPHGTKTQDSEESVAAATVAAAAAAVTFAQPEPAAAPAVDKEEEEEEEEEE
EEEEEEEQEEVAEFSQSKEKILDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggatatcaagcggaggttgacagccaggtcagaccgagtgaagagt
gtggaccttcacccgacagagtcgtggatgctggccagtctttacaacggaagtgtgtgt
gtttggaaccatgaaacacagactcttgtcaagacctttgaagtgtgtgacctccctgtc
agagcctctaagtttgtggctaggaagaactgggtcatcaccggagcagatgacatgcag
atccgtgtgtttaattacaacaccttggagcgggttcacatgtttgaggcccactcagat
tacatccgctgcattgcagtccatcctacccagccctacatcctcaccagcagtgatgac
atgttgatcaagctatgggactgggagaagaagtggtcatgcagccaggtgtttgagggt
cacactcactatgtcatgcaaatagttatcaaccccaaggacaacaaccagtttgccagt
gcctccctggacaggactattaaggtctggcagctaggctcttcatctcccaatttcact
ttggagggccatgagaaaggagtcaattgtattgattactacagcggaggggacaagcct
tacctcatctcaggagctgatgaccgccaagtaaagatctgggactaccagaacaagacg
tgtgtgcagactctggagggccacgcccaaaacgtatcttgtgtcagcttccacccagag
ctacccatcatcatcaccggctcagaagatggtaccgtgcgtatctggcactcaagcact
taccgcctggagagcaccctgaactatggcatggagagagtgtggtgtgtgtctggcctc
aggggctccaacaatgtagcactgggctatgatgaaggaagcatcatcatcaaggtgggt
cgagaggagccagccatgtctatggacactaatggaaaaataatctgggctaaacacagt
gaaatacagcaagccaacctgaaagccatgggtgacgctgagatcaaggatggagagagg
ttgccattggctgtcaaagacatgggcagctgtgagatctacccccaaaccatccaacat
aaccccaatggaaggtttgttgttgtgtgcggagatggagagtatatcatctatactgcc
atggctttgaggaacaagagcttcggctcagcacaggagtttgtctgggctcatgactca
tctgagtatgctatcagagaaagcagcagtattgtcaaaatcttcaaaaatttcaaagaa
aagaaatctttcaagccggactttggagctgaagggatctatggaggtttcttgcttgga
gtgagatcagtcaatggccttgcattttatgactgggagaatacagagctgatccgccgt
attgagatccagcccaaacacatcttctggtcagactctggtgaacttgtctgcatcgct
acagaggaatcctttttcattttgcgttacatggcagataaagtagctgcctctcaagaa
aacaatgaaggagtgaccgaggatggtattgaagatgcctttgaggtccagggagagatc
caggagattgtaaagaccggactctgggtgggagactgcttcatctacaccagctctgtg
aaccggctcaactactttgtaggaggagagattgttactatcgctcacctggacagaacc
atgtacctgctgggttatatacccaaagatgaccgtctgtacctgggagacaaggagctc
aacattgtcagctactccctgctggtctctgtcctggagtaccagacagccgtcatgagg
agggactttggaatggctgacaaggtgctacccactattcccaaggagcagcgaaccagg
gtggcccatttccttgagaaacagggtttcaagcagcaggcgctggctgtgtccactgac
ccagaacacaggtttgagctggcgttacaactgggagaattgaagattgcttaccaactg
gctgtagaggcagagtctgagcagaagtggaagcagttagcagagctggctatcagtaag
tgccaatttggtctggcccaggagtgcctgcaccatgcccaggattatggtggcctgctc
ctccttgccacggcctctggtaacgccactatggtgggcaagctggctgaaggggcagag
aaggacggcaagaacaacgtggccttcatgacctacttcctgcagggaaaactggatcaa
tgtttggagctcctgatcaggacaaaccgactacctgaagcagccttcctagctcgcact
tatctgcccagtcaggtgtcccgtgtggtcaaattgtggagggagaacctggcaaaggtt
aaccagaaggcggcagagtccctagcagaccctacagagtatgagaatctattccccggg
ctgaaagaagcctttgcagctgagcatttcctcagagagagctgcttgggtaccaccagg
cccgccaaagattatcctcttgtcacactcaatgaagacaggaatattcttgaagaggct
cagggatatgagcccaaaggaatcttcattcctcatggcaccaagactcaagatagtgag
gaatcagtggcagcagctactgttgctgcagcagcagcagctgtgacgtttgcacagcct
gaacctgctgctgccccagcagtggacaaagaagaagaggaggaggaggaagaagaagag
gaggaggaggaagaagaagaacaggaggaagtcgctgaattctcacagtcaaaagaaaag
attctggacgagctggaggttgacttggacaacatggagctggatgacattgatacaaca
gacgttaacctggatgatgactttctagatgactga
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