KEGG   Labrus mixtus (cuckoo wrasse): 132979056
Entry
132979056         CDS       T10666                                 
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132979056 (prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmix03041]
    132979056 (prpf38b)
Spliceosome [BR:lmix03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    132979056 (prpf38b)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 132979056
NCBI-ProteinID: XP_060900507
LinkDB
Position
8:14132287..14137846
AA seq 466 aa
MANVGNQQPTQAVSKSAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPADLIDWYDGFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAQKEPQEEEEEAASAEPGRQGE
RRRSRTPRRTPSPKRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKERDGRDRDRDR
GERGDRERRRSRSADRNHERRERKKSRSGSRERKSERKDKDRDGGEDKSRRKDREHHKDR
GVERERSRDKKSRGETDDKRHKDDRDRHRDERKAKKSKSRSKERKHKSSGEEKSRKKERS
HDKDREREGEQRPHKRSHSKERSHHQRESNNDHSKHSERRRSHSTE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggctaacgtcggaaaccagcaaccaacacaggccgttagcaagtctgcacctggaaaa
cacggaaatgtattgcccctgtggggtaacgaaaagactatgaacctcaatccaatgata
ctcacaaatgtactgtcgtcgccgtatttcaaagttcagctgtatgaacttaagacctat
cacgaagtggtcgacgaaatctacttcaaggtgactcacgctgagccttgggaaaaggga
agcagaaagactgcaggccagactggaatgtgcggaggggtgcgcggagttggaactggt
ggtattgtgtctactgctttctgtcttctatacaaactgtttacactcaagctgacccga
aaacagctgatgggtctgatcactcatacagactctccatatatcagagctctcggcttc
atgtacataaggtacactcaacccccggcagatttgatagactggtacgatggtttcctg
gatgatgaggaggagctggatgtgaaggccggaggtggctgtgtgatgacagtcggggag
atgctgcgctctttcttgaccaaactggagtggttctccactttgttcccccgtatcccc
gtgcctgtgcagaaagctatagaccagcagatgaaggccaggcctcgtaaggtggcgcaa
aaggagccgcaggaggaagaagaagaagccgctagcgcagagccggggaggcaaggagaa
cgacgccgctccaggacacccaggcggaccccaagccccaaaaggtcacccaaacgatca
aggagcaggagccaccaccgtgagagagaacgccatgggcccagttttgaccgagagctg
gagagggagcgggaccgccagaggaaggagagggatggcagggaccgggatagggacaga
ggggaaagaggggacagggagaggcgacgttcccgcagtgctgacaggaaccatgagcga
cgagagcgcaaaaaaagtcgcagtggcagccgggagcggaaaagtgaacgtaaagacaaa
gacagagacggcggtgaggacaagagcaggaggaaggacagggagcaccacaaagataga
ggcgttgagagggagaggtcccgggataagaagagcaggggagagactgatgacaagagg
cataaagacgacagggacagacacagagacgagaggaaggccaaaaagtcgaagagtcga
agcaaggagaggaagcacaagagtagtggagaggagaagagcaggaaaaaagagcgcagc
cacgacaaagacagggagagagagggagaacagcgtcctcacaaacgtagtcatagcaaa
gagagaagccatcatcagcgagagtccaacaacgaccatagtaaacatagcgaacgcaga
aggagtcatagcactgagtaa

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