Labrus mixtus (cuckoo wrasse): 132979056
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Entry
132979056 CDS
T10666
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132979056 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmix03041
]
132979056 (prpf38b)
Spliceosome [BR:
lmix03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
132979056 (prpf38b)
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Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
132979056
NCBI-ProteinID:
XP_060900507
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Position
8:14132287..14137846
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AA seq
466 aa
AA seq
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MANVGNQQPTQAVSKSAPGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPADLIDWYDGFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAQKEPQEEEEEAASAEPGRQGE
RRRSRTPRRTPSPKRSPKRSRSRSHHRERERHGPSFDRELERERDRQRKERDGRDRDRDR
GERGDRERRRSRSADRNHERRERKKSRSGSRERKSERKDKDRDGGEDKSRRKDREHHKDR
GVERERSRDKKSRGETDDKRHKDDRDRHRDERKAKKSKSRSKERKHKSSGEEKSRKKERS
HDKDREREGEQRPHKRSHSKERSHHQRESNNDHSKHSERRRSHSTE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccagcaaccaacacaggccgttagcaagtctgcacctggaaaa
cacggaaatgtattgcccctgtggggtaacgaaaagactatgaacctcaatccaatgata
ctcacaaatgtactgtcgtcgccgtatttcaaagttcagctgtatgaacttaagacctat
cacgaagtggtcgacgaaatctacttcaaggtgactcacgctgagccttgggaaaaggga
agcagaaagactgcaggccagactggaatgtgcggaggggtgcgcggagttggaactggt
ggtattgtgtctactgctttctgtcttctatacaaactgtttacactcaagctgacccga
aaacagctgatgggtctgatcactcatacagactctccatatatcagagctctcggcttc
atgtacataaggtacactcaacccccggcagatttgatagactggtacgatggtttcctg
gatgatgaggaggagctggatgtgaaggccggaggtggctgtgtgatgacagtcggggag
atgctgcgctctttcttgaccaaactggagtggttctccactttgttcccccgtatcccc
gtgcctgtgcagaaagctatagaccagcagatgaaggccaggcctcgtaaggtggcgcaa
aaggagccgcaggaggaagaagaagaagccgctagcgcagagccggggaggcaaggagaa
cgacgccgctccaggacacccaggcggaccccaagccccaaaaggtcacccaaacgatca
aggagcaggagccaccaccgtgagagagaacgccatgggcccagttttgaccgagagctg
gagagggagcgggaccgccagaggaaggagagggatggcagggaccgggatagggacaga
ggggaaagaggggacagggagaggcgacgttcccgcagtgctgacaggaaccatgagcga
cgagagcgcaaaaaaagtcgcagtggcagccgggagcggaaaagtgaacgtaaagacaaa
gacagagacggcggtgaggacaagagcaggaggaaggacagggagcaccacaaagataga
ggcgttgagagggagaggtcccgggataagaagagcaggggagagactgatgacaagagg
cataaagacgacagggacagacacagagacgagaggaaggccaaaaagtcgaagagtcga
agcaaggagaggaagcacaagagtagtggagaggagaagagcaggaaaaaagagcgcagc
cacgacaaagacagggagagagagggagaacagcgtcctcacaaacgtagtcatagcaaa
gagagaagccatcatcagcgagagtccaacaacgaccatagtaaacatagcgaacgcaga
aggagtcatagcactgagtaa
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