KEGG   Labrus mixtus (cuckoo wrasse): 132979098
Entry
132979098         CDS       T10666                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
lmix  Labrus mixtus (cuckoo wrasse)
Pathway
lmix04382  Cornified envelope formation
lmix04510  Focal adhesion
lmix04512  ECM-receptor interaction
lmix04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lmix00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132979098
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132979098
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132979098
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    132979098
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lmix04147]
    132979098
   00536 Glycosaminoglycan binding proteins [BR:lmix00536]
    132979098
Exosome [BR:lmix04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   132979098
Glycosaminoglycan binding proteins [BR:lmix00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   132979098
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 132979098
NCBI-ProteinID: XP_060900589
LinkDB
Position
8:complement(15261500..15274226)
AA seq 1359 aa
MLGEKGLPGLNGRVGPKGYPGDVGLPGPPQFYDGRDARGHKGDRGYPGIPGPPGDPGFMG
MHGPPGPPGMTIPEVPGRPGPQGRTGEKGYKGEPGRYSDFEIRQYPGPKGSKGPPGSKGV
TGLPGPPGCGDYYCEPGYPGDPGAPGPKGLPGNPGLKGIKGCEGKCECRSGGGNQGPPGP
PGYTGPPGLPGTQGLKGDPGPKGEEGFRGQQGYQGLPGFKGPKGQKGDSFVVGVKGAKGN
IGVPGYSGPSGAPGRPGRDGPPGPAGDRGPPGAGYVGLPGPKGDPGGPGNKGFPGPVGPE
GTGFQGPKGLPGTKGNQGNPGHPGIPGRSGPPGETEPCCDDQEIGSPGRKGEPGLLGFPG
APGRDGLPGAQGHPGPKGLKGEDARSGGFGPPGPPGINGDSGNPGPSGLRLDGPPGPPGL
PGPPGRKGAPGDVFSARPGDPGPPGRLGAIGAKGFHGLPGNPGSPGAQGQPGRPGHKGEP
GDIGDPGATGLPGLPCTLCDLHGPQGPPGSPGNLGLRGTPGYPGQKGYKGQTGPSSHGRK
GPQGFPGPPGLPGPVGPRGPTGPSGDHGADGFPGQKGERGYSGRPGSSGLPGRPGPPGSR
GKQGERGFNGRQGPSGYPGPPGYIGLRGPPGKPGPSRIVNVAKGQTGPPGRNGQPGEQGP
QGSKGPKGVPGDSGSDGWAGPPGFKGSTGAPGRGGVPGTPGPPGDKGFPGPKGHTGHGGD
PGDQGPFGPSGIPGLPGFPGSKGDPGQSYGQPGPPGLKGLPGEDGPSAIRGIPGDPGDPG
SPGSCGQPGPQGYPGDPGRQGEPGFPGPHGRPGHPGVPGVPGDGGGQGPPGPPGPNGPQG
PRGPPGLDGLNGLRGPKGMKGASGIGNPGPPGPDGFPGVKGLMGIPGPPGASNPGPKCQR
GPPGSTGLPGIPGGHGYPGVECHTPMPGSRGDTGYEGPPGPPGPHGNPGRPGSSISTKGD
PGPIGFPGMPGRKGSKGFPGSPGSQNYLGFPGTKGERGPDGPRGFPGPKGPRGNPGPFGP
KGVRGPGGDRGAKGPPGDSIHIPPMESFHGLPGQRGDPESVGSPGYAGPLGPPGRKGEKG
TMGSLGFTGTPGPPGYNGPVGDPGDAGQQGFPGPQGTLGQPGDPGEPGHRGARRSGFLLV
IHSQSVQLPKCPDGSGQLWWGYSLVYLEGQEKAHTQDLGQAGSCLPVFSTMPFSYCNKAA
CHHSSRNDKSYWLSTTASIPMMPMFGQEISSHISRCVVCETVSPAVAFHSQDHTVPACPP
GWRSLWTGYSFLLHTGAGDEGGGQSLTSSGSCLKDFRAHPFIECQGARGSCFYFSNMYSF
WLTTVGQTEQFVTTMPGTIKATDQQRRKTSQCHVCRRGL
NT seq 4080 nt   +upstreamnt  +downstreamnt
atgcttggagagaaagggcttccaggactcaatggaagagttggaccaaagggttaccca
ggggatgtaggtctccctggtccacctcaattttatgatggaagggatgccagaggtcat
aaaggggatcgtggttatcccggaatacctgggccccccggtgacccagggttcatgggc
atgcatggacctcctggcccaccagggatgacaataccagaggtgcccggtcgacctggt
ccacaaggacgaactggtgaaaagggatacaagggagagccaggaaggtatagtgacttt
gagatcagacagtatccaggaccaaagggctctaaaggaccccctggaagtaaaggtgtc
acaggtctcccaggtcctccaggatgtggagattactattgtgagcctggatacccaggg
gaccctggagccccaggacccaaaggattgcctggaaatcctgggctcaaaggaattaaa
ggttgcgaagggaaatgtgaatgtcggtcaggtggcggaaaccaagggccccctggtccc
cctggttatacaggacccccagggttacctggaacacaaggactaaagggagatccagga
ccaaagggagaggagggtttcagaggacagcaaggctatcaaggattgcctggttttaaa
ggaccgaagggtcaaaaaggggactcttttgtggtgggtgttaaaggtgccaagggtaat
ataggagttccaggatattctggtccttctggagcaccaggtagaccaggccgcgatggc
ccgcctggccctgcaggagaccgtggaccaccaggtgctggatatgtaggactacctggt
cccaaaggtgaccctggtggtcctggaaataaaggttttccagggcctgttggccctgaa
ggtactggttttcaaggccccaaggggctacctggaactaaaggaaatcagggaaatcct
ggccatcctggaattcccgggagatcaggcccaccaggtgagactgagccatgctgtgat
gatcaggaaattgggtcacctggtcgtaagggggaaccaggtctactagggtttccaggt
gcgcctggaagagacggtcttcctggagctcagggacatccaggccctaaaggattgaaa
ggagaagacgccagatctggagggtttggaccaccaggacctccaggtataaatggggat
tctggtaaccctggtccaagtggactacgcctggatgggcctccaggccctcccggatta
ccaggaccaccaggcagaaagggtgcacctggagatgttttctctgccaggccaggtgat
cctggtccacctggccgccttggagctataggggcaaagggattccatggccttcctgga
aacccagggtctcctggtgcacaaggccaacctggacgcccaggccataaaggagagcct
ggagacattggtgatcctggagctactggtctcccaggcctaccctgcaccctgtgtgac
ctgcatggacctcaaggccctccaggatctccaggaaaccttggattgagggggacacca
ggctaccctggtcagaagggttataagggacaaacaggtccatctagccatggacggaag
ggaccacaaggtttccctggtcctccaggtctgccaggcccagtcggaccaagaggcccc
actggcccctcaggagatcatggagcagatggcttcccaggacagaaaggtgaaagaggg
tactctggtagacctgggtccagcggtttaccaggtcgccctggacctccaggatcaaga
ggtaaacagggagagagaggctttaatggccgccaaggtccctcaggataccctggaccc
cctggttatataggtttacgtggaccaccaggaaaaccaggaccttcacggattgtgaat
gtggcaaaaggacaaacgggacctccaggaaggaatggacaaccaggagaacagggacct
caaggctcaaagggcccaaaaggagtcccaggtgattctggttcagatggatgggctggt
cctccagggtttaaaggcagcactggtgctccaggcaggggaggagtaccaggaactcca
ggaccccctggagacaaaggtttccctggtccaaaggggcacaccggacatggtggagat
ccgggagatcaaggcccatttggcccttcaggtatcccaggactgccaggattcccaggg
tccaagggtgaccctggacagtcttatggacaacctggtccacctggactcaaaggactg
cctggggaggatggacccagtgcaatcagagggattccaggagatccaggtgacccagga
tccccaggaagctgtggacagccaggaccacaaggctacccaggggatccaggaagacaa
ggagaaccaggctttcccgggccacatggccgaccaggtcatccaggcgttcctggtgtt
ccaggcgatggtggaggacagggaccaccgggcccacctggcccaaatgggcctcaaggg
cctcgggggccaccaggtctggatggactgaatgggcttagaggaccaaaaggaatgaaa
ggagcaagcggcataggtaaccctggccctcctggaccagatggttttcctggagtcaaa
ggtctcatgggcattccaggacctccaggagcctctaaccctggacctaaatgccagagg
ggcccacctggcagcacaggccttccaggtatcccaggtggacatggttaccccggtgta
gaatgccacacaccaatgcctggatcccgaggagatacaggatatgaaggaccaccaggg
cctccaggtcctcatggaaatccaggccgtccaggcagcagcatttccaccaaaggagac
ccaggtccaattggtttccctgggatgccaggtcgaaagggaagtaaaggatttcctgga
tcccctggatctcagaactacctaggctttcctgggacaaaaggtgagagaggccctgat
ggtcctaggggttttccaggacccaaaggaccgagaggtaaccctgggccttttggtccc
aagggagtaagaggcccaggtggtgacagaggtgccaagggtcctcctggtgattccatt
catatacccccaatggagtcttttcatggtcttccaggacaacgtggtgacccagagtct
gtgggatctcctggatatgctggtcctctaggtcctcctggacgcaaaggagagaagggc
actatgggatctctcggcttcactggcactccaggtcctcctggttataatggtcctgtt
ggagacccaggtgatgctggtcagcaaggatttccaggtcctcaaggtacattaggtcaa
cctggtgatccaggtgagccaggccataggggggccaggaggtcaggcttcctgttggtg
attcacagccagtctgttcagctgccaaagtgccctgacggcagcggtcaactttggtgg
ggctacagtctagtctacttggagggacaagaaaaggctcacactcaagacctgggccag
gccggctcctgcctccctgttttctccaccatgcctttctcctactgcaacaaagcagca
tgccaccactccagccgcaatgacaaatcctattggctttccaccaccgcttctataccc
atgatgccaatgtttggccaggagattagctcccacatcagccgctgtgtggtgtgtgag
acggtgtcacccgctgtggcttttcacagccaggatcacaccgtccctgcatgcccacct
ggctggaggagtctgtggacagggtactcattcctcctgcacacgggggctggtgatgag
ggcggtggccagtctttgacatcttcaggtagctgcttgaaggatttccgggctcacccc
ttcattgagtgccagggtgcgaggggttcctgcttctacttttctaatatgtacagtttt
tggctgactactgttggtcaaacagagcagtttgttaccacgatgcctggcaccataaag
gcaactgaccagcagagacgcaagaccagtcagtgtcatgtctgccgcagggggctctga

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