Labrus mixtus (cuckoo wrasse): 132979122
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Entry
132979122 CDS
T10666
Symbol
ptch2
Name
(RefSeq) protein patched homolog 1
KO
K11101
patched 2
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132979122 (ptch2)
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GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
132979122
NCBI-ProteinID:
XP_060900631
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All DBs
Position
8:complement(15562637..15591847)
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AA seq
1491 aa
AA seq
DB search
MASDRGVPGSGVYGDLPPSYTRSQPPENPDLLRRPSYCHAAFALKQISKGKAVGQKAPLW
IRARFQALLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEQLWVEAGSRVST
ELRYTKEKQGEESVFTSQMLIQTPKEEGTNILTQEAMLVHMEAALSASKVQVSLFGKSWD
LNKICYKSGVPIIENVMIERMIDKLFPCMIITPLDCFWDGAKLQGGSAYLPGMPDIQWMN
LDPVKLMEELSQFTSLEGFKEMLDKAQVGHAYMNRPCLDPSDPDCPLSAPNKEQGESPDI
AGRLQGGCHGFSRKFMHWQEELILGGRIKSNQDALLSAEALQTMFLLMSPKQLYEHFKDD
YEIHDINWNEEKATAILESWQRKFVEVVHQSIPDNSTQSLHAFSTTTLNDIMKSFSDVSV
IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAAT
TQVLPFLALGIGVDDMFLLAHSFTEAGTNIPFKERTGDCLRRTGTSVALTSINNMIAFFM
AALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLHRREDKRLDVLCCLYSPCADR
VIQLSPHELSDAGEQPNTPTTTTAHTHQYTGGSTITTSTQITTTVQAFTQCDAAGQHIVT
ILPPTSQISTSPTSIIVCPPSQPQAITPSPTTTSVPDPYGSQLFTPTSSSTRDLLAQVED
SKSGKKCVPLPFLHWNLSSFARDKYAPLLLKPKSKAIVVVFFLGLLGLSLYGTTMVHDGL
YLTDIVPRDTKEYDFIDAQFKYFSFYNMYLVTMDGFDYARSQRLLIQLHNAFNSVKYVVR
DSDGKLPRMWLHYFQDWLRGLQAAFDADWQAGRITTDSYRNGTEDGALAYKLLIQTGSKK
EPFNYSQLTSRRLVDAEGLIPQEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYD
TTGENLRIPAAEPLEFAQFPFYLNGLRQASDFVEAIESVRAICDEFGRKGVFNYPNGYPF
LFWEQYIGLRHWFLLAISVVLACTFLVCAILLLNPWTAGIIVFILAMMTMELFGIMGLIG
IKLSAIPVVILIASVGIGVEFTVHIALGFLTAIGNRNKRSAVALEHMFAPVVDGAISTLL
GVLMLAGSEFDFIMRYFFAVLAILTVLGMLNGLVLLPVLLSMMGPPAEVSPVDNASRLPT
PSPEPPLPPPMTHHGYFTGHHNPRSSRQQAFSESSDSEYYSEVTTTSGIGEEEYKYCDRS
AYITSHTSAPSTTSHILLEASKNPSFPKLTVVKPFRENATGTGGRIEPKNESSHIAQSPL
GSQLTCWDGNKRESKQGPQRLQGPPGQHLPSNRAHFPGRTCQSSPRHSSRGPQPNRTKGP
SYSNSNSALPTQQGSAGGAVTMVTATASVTVAVHPTLPGTAYQGYMHEGFETDSESDCFE
AAKRTCGGKTNFSSCKRDSLELQDLEATQSQTENQISKTQGGLRIQAPKDC
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggatcgcggggtcccagggtccggcgtctatggagatttacccccgagttat
acgcgctcccagccgcctgaaaacccagacctcctccggagaccgagctactgccacgct
gctttcgcacttaaacagatctcaaaggggaaggcggtaggtcagaaagctcctctttgg
atccgggccaggttccaggccctcctgttctctctgggttgccacatccagaggcattgt
gggaaggtactctttatcggactcttagtgttcggcgccctgtctgtgggactccgagtg
gctgccatcgaaacggacatcgaacagctatgggtggaagcgggcagtcgggtaagcaca
gagcttcgttacaccaaggagaagcagggagaggagtcagtatttacctcacagatgctc
attcagacccccaaagaagagggcaccaatattcttacccaggaagcaatgctggttcac
atggaggccgccctgtctgccagcaaggtccaggtgtcgctgtttggaaaatcctgggat
cttaacaaaatatgctataaatcaggagttcctattatagaaaatgtcatgattgaaagg
atgattgacaagctattcccctgtatgataatcactccattggactgtttttgggatggg
gccaaacttcaaggaggttccgcctatttaccgggaatgccagatatccagtggatgaat
ctggatccagtgaagctgatggaggagctgagtcagttcacttcactagagggattcaaa
gagatgttggacaaagcacaggtggggcatgcctatatgaacagaccatgtttagacccc
tcagaccctgactgccccctcagtgcccccaacaaggagcaaggagagagtcctgacatt
gccgggcgtctccagggtggttgccatggattcagccggaagttcatgcactggcaggag
gagctgatcctgggagggcggataaagagtaatcaggatgctctgctgagtgcggaggct
ctacaaaccatgttcctgttgatgagtcccaagcagctgtacgagcactttaaagacgac
tacgaaatccacgacatcaactggaatgaggaaaaggccaccgccatcctcgagtcctgg
cagaggaaatttgtggaggtggtccaccagagtatcccagataactccacccagtccctc
catgctttttccaccaccaccctcaatgacatcatgaaatccttctctgatgtcagcgtc
atcagggtggctggaggatacctgctcatgctggcctacgcctgtgtaaccatgctaagg
tgggactgtgccaaatcccagggggctgtgggactggctggggtgctgttagtggctctg
tctgtggctgcaggactcggtctctgctccctgcttgggctgtccttcaacgctgctact
acacaggtgctccccttccttgcacttgggattggtgtggatgacatgtttctgttggct
cattccttcactgaagctgggactaacatccccttcaaggaacggacaggagattgtttg
cgtcgcaccggcactagtgtggctctgacttccatcaacaacatgattgccttcttcatg
gcagctcttgtacccatccctgcgttgcgagctttctctttgcaggcggccattgtggtc
gtgtttaactttgccatggtgctgctcatcttccccgccatcctcagcctggacctccac
aggcgggaggacaagcgtttggatgtgctctgctgcctgtacagcccctgtgctgaccgt
gtcatccaactctccccgcatgagctgtcggatgctggagagcagcctaacacacctacg
accactacagcccacacacaccagtacacgggagggtcgacaatcaccaccagcacccag
atcaccaccacggtgcaggcgttcacacagtgtgatgcagcaggccagcatatcgtcacc
atcctgccacctacatctcagatctccaccagcccaacatccatcatcgtctgcccacca
tcacagcctcaagccatcacaccttcccccaccaccacctctgtgccagacccctatgga
tcccagctcttcaccccaacctccagctccacacgggacctgctcgcccaggtggaggat
tccaaatcaggaaagaagtgtgtcccgctccctttcctgcactggaacctgtccagcttc
gccagggacaaatatgcccctctgctcctcaagcctaaaagcaaagcaatcgtggtggtt
ttctttctgggcctcctgggcctcagcctctacgggactaccatggtgcacgacggactc
taccttacagacatcgtgccacgcgacaccaaggagtatgacttcatcgacgcccagttc
aaatatttctccttctacaacatgtatctggtgaccatggatgggttcgattacgcgcgg
tcgcagagactgttgatccagctacacaatgcctttaactctgtgaaatacgtggtcaga
gacagcgacggaaaactaccccggatgtggctgcactacttccaggactggctcagaggt
cttcaggctgcatttgatgctgactggcaggcagggaggattaccactgacagctatcgc
aacggcacagaggacggagcactggcttacaagctcctcatccagactggctccaagaaa
gagccttttaactacagccagctgacttctcgccgtctggtggatgcagagggtttgatc
ccccaggaggtgttttacatttacctgacagtctgggtcagcaatgatccccttggctat
gctgcctcccaggctaacttctacccacatcctagagagtggattcacgacaagtatgac
actacaggggagaatctgcgcatcccagctgcagagcccctggagtttgcccagttcccc
ttctacctgaacggccttcgccaggccagcgactttgtagaggccatcgagagtgtgcgg
gccatctgtgacgagtttggccgcaagggtgtgttcaactacccaaacggataccccttc
ctcttttgggagcagtatatcggcctcagacactggttcctgctggccatcagtgtggtt
ctggcctgcactttcctggtctgtgccattctgctgctcaatccctggaccgccggcatc
attgtgttcattttggctatgatgacaatggagctgtttggcatcatgggtctgatcggc
atcaagcttagtgccatacctgtggtcatccttatcgcctctgtgggcatcggagtggag
ttcaccgtccacattgcactgggcttcctgacagcgattggcaacagaaacaagcgctcg
gcggtggctttggagcacatgttcgccccggtggttgacggagcgatttctactctgctg
ggcgttctcatgctggcaggctccgagtttgacttcatcatgaggtatttctttgctgtg
ttggccattttaactgttctggggatgctaaacggcttggttctcctgccggtccttctc
tccatgatgggtcctccagctgaggtcagtcctgtagacaatgccagtcgcctgcccact
ccttcacctgagccccctctgccgccacccatgacccaccacgggtacttcacaggccac
cacaacccgcgctcatctcgtcagcaggcattttcggagtcgtcggactctgagtattac
tcggaggtgaccaccacatcagggattggagaggaggagtataagtactgtgacaggagc
gcctacatcacatcgcacaccagcgctccatctacaacatctcacattctgctagaagcc
agcaagaatcccagcttcccaaagcttacggtggtgaagccattcagagagaatgcgaca
ggcactggtggaaggatagaaccgaaaaatgaatcctcccatattgcacagtcacctctg
ggctcccagctaacctgctgggatggaaacaagcgggagtcaaagcagggcccccagagg
ctccagggaccccctgggcaacacttacccagcaacagagctcacttccctgggaggact
tgtcaaagcagccccaggcacagcagcagagggcctcagccaaacaggactaaagggcct
agctatagcaatagcaactctgccctgccgacacaacaaggatctgctgggggggctgtt
accatggtaacagccacagcttccgtgactgttgcagtgcatccgaccttgccggggacg
gcttaccaaggctacatgcatgaaggttttgaaactgacagtgagtcagactgttttgag
gctgctaagaggacctgtggtggcaaaacaaacttttcttcatgtaagagagactcttta
gagctccaggacctggaagcaacacagagccagacggagaatcagatcagcaagacacaa
ggtgggttgaggatccaggcacccaaagattgctag
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