Labrus mixtus (cuckoo wrasse): 132979242
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Entry
132979242 CDS
T10666
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132979242 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmix01009
]
132979242 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132979242 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
lmix03029
]
132979242 (rb1cc1)
Protein phosphatases and associated proteins [BR:
lmix01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132979242 (rb1cc1)
Membrane trafficking [BR:
lmix04131
]
Autophagy
Autophagosome formation proteins
ULK complex
132979242 (rb1cc1)
Mitochondrial biogenesis [BR:
lmix03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132979242 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
132979242
NCBI-ProteinID:
XP_060900873
LinkDB
All DBs
Position
8:complement(18567879..18582829)
Genome browser
AA seq
1620 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDTSYINYQR
DLEEIKVKLTKLGTAVAVMARIPLLECLTRHSYRESMEKSSSTPGKDSDETEEEKSTDSV
LCNAGAQKPSKFSASLSASGTPTCEQTGDHETNKMTDSGGLRAALLDDDTPEFANPSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTISKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRV
VDALSTVPQMYCLSVVEVVRRKMFMRHYREWAYALVKDGKLLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISVDDLQYLKSCCPLEVQPFLMVPAMCD
VEPLNRHIETLQQLVQAAQSVDEMSRTITELLSEQRSSYCQSAQRSTVLTPQSETTPGTS
TQMSSKTPSSLNLQGPQHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDLD
SLAESPESDFMSAVNEFVIEENMTSPNPISDPTSPEMMVESLYSSVINAIDSRRMQDTTI
LERENSRIAVLRQVVDKYRSAAEESHSNLQSVKGDLCHLKGLVLKEQHDFCFVLRSMSTE
VQHIVNNISQTQELQLKEQHQNELLAVRQELEKQVQTLTEENQVNQNIVRDVQRAMLELE
GLMERKEKELTQLEHERERWAETESNQTDQIKHLDQVIRDLAEEIKTLSVSKDSLTSQIE
NLYFEIERSQQTIRQELEVNEQLHLKELGDRMKQEHRAELETFTKNNQEALEHLASESSA
KLSEAADHHASALREKENQIKDLEARITELAELRCKLEVELALKESETEEMKLLIEEAKT
QQADVLKSQVEAETKVLSEELNGLRKQLQVKNEEYEVDLAELRTLMRIEKDHCISELVER
HEEETILLRTELSSLQQQAREAERNHAEQHQSLKQELDQRVAALSEEKEKQHRSFQEVEQ
ELRTVVSNLQAENDLLSNKLEQDRERQATEKDFEQEEASKAASLDAFKELEQQKEEMEKR
LSDKIRQLENELHERQSSKSDEGLPLQAEGHADAVAPLSLDSALQERLQQERASLQSQME
LMEKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIIKELSEKLQKVTQQQEKDKGL
IETLSEDRASVMQEKKHLEEELNRLRSTALISSTFFTSHPSAQEVTEAGAAARALPVAGA
CSSEPMTDTDRLASVAAIRDDENVDSAVEASMVTVHDNILMSEEKQRILLLERTLHMKEE
ENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLH
SESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgatacagatctt
gctgtccaaactgtactggagctcaaacatgccatccaagccaaatacaagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagaggcgggtctgc
agctacagtgctggcactgaaaccaaccccatatttttgttcaacaaagagatgatcttg
agtgaccgggatccaacgatccccaaaaccaccttctcaatagagagtgagattcaggtt
aaggtggaggagtctctactgatgccagctgtctttcacactgttgcctcgcggacacaa
cttgctctggaaatgtttgaagttgccaataaacttagttctttctgtgaacgtttggtt
catgatgaacaccttcaacatcaaggctgggctgcaattatggccaatctggatgactgc
actctgtcatatcagaagttgcttgtgaaatttgacacttcatacataaattatcaacgt
gatttggaagaaattaaggtgaaacttacaaagttagggacagcagtcgctgtcatggcc
aggatacctctgcttgagtgtttaacaagacacagttacagagagagcatggaaaagtcc
agctcaactccagggaaggattcagatgagacagaagaagaaaaatccaccgactctgtg
ctctgtaatgctggtgcacaaaagccctccaagttttcagcctctctctctgcttctggg
acacccacatgtgagcaaactggagaccacgaaacaaacaagatgactgacagtggtggt
ctgagagctgcgctcttagacgatgacactccagagtttgcaaacccgtcctccttcaat
gttacactattagactggatcaatgtgcaagacagacccaacgatgtggagtctgttgtg
aggaagtgctttgactccatcaacaggcttgacccacggatcattcagccattcctggca
gattgtcgtgacacaatttccaagctagataatcaaaacatgaaagccatcaaggggctt
gaggacaggttgtatgctctcgaccaaatgattgcaagctgtaagaagttggtgaatgaa
cagaaagaactagctcagggatttttggccaatcagaagagggctgaaaacctgaaggat
acatctgttctgcctgacttatgtctgagtcacacaaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacatcaaaaagaagtgcaccactgccaaacaagaacttgca
aacaaccttcaagtccgactcaaatggtgctgctacgtgatgctccacgcagaccaggat
ggagagaagcttcaggctctactcagactcctgacggagctgatggaaagagtgagggtg
gtggatgccctgagcacagtgccccagatgtactgcttgtcagtggttgaagttgtcaga
agaaaaatgtttatgcgccactacagagagtgggcttatgcacttgtgaaggatggaaaa
ctactgtatgaggcagagaagttcaaaagggagtcctttgggaaactctttaggaagtct
ttcctcagaaatcgtttgtttagaggacttgattcatggcctccaacatcattttgtaca
cgaaagcccagaaggtttgatgatgaacttccagacatctcagttgacgacctgcagtac
ttgaaatcttgttgtcctttagaggtgcagcctttccttatggtacctgcaatgtgtgac
gttgagcccttaaatcgacatattgagacgcttcagcagctggtccaagcagcacagagc
gtagacgagatgtcccgaaccataactgagctgctcagtgaacaaaggtcgtcctactgt
cagagcgctcagagatcaactgtgttgaccccacagtctgagaccactcctgggacctca
acacagatgtcctccaaaaccccgtcctcccttaaccttcaagggccccaacatgttcct
gtcccagctcctctggaggacttatccccggacagcattgatgcacaaacatttgacttt
gaaaccattggccatccgaacatggatccagtcctgcagcagggctccctggacttggat
tctctagcagagagccctgaatctgacttcatgtctgctgttaatgagtttgtgattgaa
gagaacatgacctctccaaaccccatcagtgaccctaccagccctgagatgatggttgag
tctctgtactcttcagtcatcaacgctattgatagcaggcgtatgcaggacaccacaata
ctagagcgggagaactcacggatcgctgtcctcagacaagttgttgacaagtatcgatca
gctgcagaggagtcccattcaaatttacagagtgttaagggtgacctgtgtcacttaaaa
ggcctggttttaaaagaacaacatgacttctgctttgttttgaggagtatgagcacagag
gtgcaacacattgtgaacaacatttcccagacccaggaactgcaattaaaagaacagcat
caaaatgagcttcttgctgttcgacaagagctggagaagcaagttcagacactcactgag
gaaaatcaagtaaaccagaatatcgtcagagacgtgcagcgtgcaatgctggagctagag
gggctaatggagcgcaaagagaaagaacttactcagctggagcatgagagagagcggtgg
gctgagacggagagtaaccagactgaccagatcaaacacctggatcaggtgattagggat
ctagctgaagagatcaagactctttcagtctcaaaagactctctgaccagccagattgag
aatctgtattttgagattgaacgcagccagcagacgatcaggcaggagttggaggttaat
gagcagttgcacttaaaggagctgggggacagaatgaagcaggaacacagagcagaactg
gagacatttaccaagaacaaccaggaagctctggaacatctggcttctgaaagtagtgca
aagttaagtgaggcagccgatcaccacgcctctgcacttagagagaaggaaaaccaaatt
aaggacttggaggctcgtattactgagctcgcagaactccgctgcaaactggaggtagag
ctagccctcaaagagtcggagacagaggagatgaagctcttaatcgaagaggccaagacc
caacaggctgatgtgctgaagtcccaggtagaggcagagaccaaagtcctcagcgaggag
ctgaacggtctaagaaaacagcttcaggtaaagaatgaggagtatgaggtggacctagca
gagctgaggactcttatgaggattgagaaggaccactgcatctcagagttggtggagcga
catgaggaagagacaattttgttgcgcactgagctctcctccctgcagcagcaagcccgc
gaagctgagaggaaccatgctgagcagcaccaaagtctgaagcaggagttagaccagcgt
gtggccgctctgagcgaagaaaaagaaaagcagcacaggagtttccaagaagtggagcaa
gagttgaggactgttgtcagcaatttgcaagctgaaaatgacctgctatcaaacaaacta
gagcaggacagagagagacaagcaactgagaaagattttgagcaagaggaggcgtctaag
gctgcatcacttgatgcttttaaagaattagagcagcagaaggaggagatggagaagaga
ctttcagacaaaattagacaacttgagaatgagctacatgagagacaatcctctaaaagt
gatgaagggttgccgctgcaggctgagggccatgcagatgctgtagcacctctgtctctg
gactcagcactacaagagcggctgcagcaggagagggcctccctgcagtcccagatggag
ctcatggagaagaagaagaatgaggagatacagaaccttaagacatcactaatcgcagag
cagcagactaatttcaacactgttctcactcgagagaagctgaagaaggagcagattatc
aaggagctctcagagaagttgcaaaaagtcacccaacagcaggagaaggacaaaggtctg
atagagacgctctccgaggacagagcaagtgtcatgcaggagaagaaacacttggaagag
gagctcaaccgccttcgcagcacagctctgatctcgtccaccttcttcacatcacacccc
tcagctcaggaggtcacggaggccggagcagcagctagagctctgcctgttgccggtgct
tgttcctcggagcccatgactgatactgacagactggcctctgtggcagccattagggat
gacgaaaacgttgattcagcggtggaggctagcatggtgacagtccacgataacatcctg
atgtcggaggagaagcagcggatactcttactagagaggactttacacatgaaggaagaa
gaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcgtctgtgtcttcacgg
cattcagacaaaatcgccatcagagatttccaggtaggcgatttggttctaatcatcctg
gatgaaaggcatgacaactacgtgctgttcacagttggtcccaccctgtacttcctccac
tcagagtctctcactgcactggacctcaaaccagcatcagggacctcaagacgaccgtgg
gtacttggaaaggtgatggagaaggaatattgccaggcaaaaaaggcccagaacaggttc
aaggttcctttaggaaccaagttctacagagtgaaagctgttccatggaacagaaaagta
taa
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integrated database retrieval system
