Labrus mixtus (cuckoo wrasse): 132979470
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Entry
132979470 CDS
T10666
Name
(RefSeq) trichohyalin-like isoform X1
KO
K22237
Rab effector MyRIP
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132979470
Membrane trafficking [BR:
lmix04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132979470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
HTH_39
Motif
Other DBs
NCBI-GeneID:
132979470
NCBI-ProteinID:
XP_060901291
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Position
8:complement(24250764..24285017)
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AA seq
1840 aa
AA seq
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MGRKLDLSGLSDNEAEHVLQVVQRDMKLRKKEEERLSELKQELDDEGSRCLLLSRQGYFN
HRCCIRCCSPFTFLLNPKRKCHDCKYNVCKACRVYSKREKAWLCSSCEKSRLLKTQNLEW
FYTNVKTRFKRFGSAKVLKTLYRKHLVEHSTLSERTEGSTYEESICNEGSISGSDSAFYR
QSEEHSMEETLTVALRVAEEALDEAITKAEFDTSSQAKQNEAHYLREHKGELVEELAKTI
VQKIINRKKTLADMRAEYVQDWPVEHNTDLHHHHQSASDRATSSVKQQPGLFRSHSAFSL
LENDSPGMVQDSPKASVKEDGGPAMTAWKSVDRLDNAGVSAVLHSMDGNWIALQSAQLSR
PSLLTKRKSQVYSALERESAVVSAYEGMGSDNDIKHGSDSSLGTALQEVHRKMVDSNMDL
QDTCDRILSPLMSRRASGDKLLSPMLGRRSSRDIVLSDSEGNWKPNKPLLGVIKLKVPAE
IRRPPSRRTSIIDMNFNTEGVRQEENMGAAERSQQKKKSEKESSSLNNSKKDNHPPEAVT
PDTLSSGGMTTPEILELQTDITGQVANQMDQELTAKLEQLAGRVDDSSTGEEKEAVYGDA
VDDGRREEEEDKDSDEEDEQQQRMEVESDEGRTEDEEKEEEEGNEEDDEEINYRLNKLIT
QSRLKYFSSTDEELDKAGKSEEEEEEEGGEGDKDEDTEEEQNEEREEKTNGFTFKLCQLE
KESRAYQFSSTEDEMDRVGIEEKTEDEEENGKNVELAVKVCRLAYQVNANQFSSTEDELD
SVGLLDEDMKTREEEEEEEEDEKKEELALKVCRLAHQVNASQFSSTEDELDRVGRGEEEE
EGTDEEALWKLRAEKAVQAAHMRDLASLVGASEFSSTEDNLDKVGQTGQEVNKVTGSDMW
ENAEGNNQDKEESFEDLDVNMFDLRDEIEEKKKGSSDETVEEKRDGMEDGVTEEGEVLKG
TERARDAETELKTVDEGKEIIKVAEENQPGARQEDDKIDESSGSQGSWETAKDEENSEEY
AEFDRIISSMLMMTLEDMQVQTVNDEAAENGGNVSEQAQVKVDENVQIEGGSGSVDREVT
IGNESELMHVEVDEEVKKGGESELEHVKVDGEVQTGAESGLENVEMDVEFKIEGESEVQD
RMIDAQSTEDTKETESKKELESPSENAPQSYAEENPEANIQKQEESEDAKGRKDNEQGKE
SDPHAIRSPAKTAVMSIKEMLETYEAKQLCQRIGLHDDKQQDRGGKVSTMRLMMEAQSDV
TEERMEETKGKKTCRKDQSRRSSLDDVLQTPEEIQMSSSAVQRIGLHDDKQDIGGKVSTM
LQMMEAQSDIAETKERMEETKGKKTYKKDQSRRSSLDDVLQTPEEIQMRYSAVQRIGLYD
DKQDIGGKVSTMLQMMEAQSDVTETKERMEETKGKKTYRKDQSRRSSLDDVLQTPEEIQM
RYSAVQRIGLHDDKQDKGGKVSTMLQMMEAQSDVTEERMEETKGKKTCRKDQSRRSSLDD
VLQTPEEIQMRYSAVQRIGLHDDKQDIGGKVSTMLQMMEAQSDVTEERMEETKGKKTYRK
DQSRRSSLDDVLQTPEEIQMRYSAVQRIGLHDDKQDKGGKVSTMLQMMEAQSDVTEERME
ETKGKKMCKKDQSRRSSLDDVLQTPEEIQMDSDMDIYKTLEFISTLLEQRYSAVQLRNIT
TEVLKVLNTTEDLLHGVKGGDKLRSSTPSLPPNTDPRKLDQQFSKLEENVYVAAGSVYSL
EAELGDLEECARSISGSTSDMELSFLEEQVASAAAKVQQSDLQICDISARIAALKNAGLN
VDTQSRPTKARTIPVMPVTLDSSRQFRRRLPAPPVKDKET
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaagctggatctgtcagggctgtctgacaatgaggcggagcatgtgctgcag
gtggtgcagagagacatgaagctacgcaagaaagaggaggagcgactcagtgaactgaag
caggagctggacgacgagggcagtcgctgcctcctgctgtcacggcagggttacttcaac
caccgctgctgcatccgctgctgctcgcccttcaccttcctgctcaaccccaagcgcaag
tgtcacgactgcaagtacaacgtgtgcaaggcctgccgggtctacagcaagcgggagaaa
gcctggctctgctcctcctgcgagaagagcaggttgttgaagacccagaacctggagtgg
ttctacactaacgtgaagacgcgcttcaagaggttcggcagtgccaaagtgctgaagact
ctttacaggaagcacctggtggagcacagtacactttctgagcgtacagagggcagcacc
tacgaggagagtatctgcaatgagggcagcatcagcgggagcgactcagccttctacaga
caaagtgaagagcacagcatggaagagacactcactgtggccttgcgggtggcagaggag
gctctagatgaggccatcaccaaggctgagttcgacacgtccagtcaggcgaagcagaat
gaggcgcactatctgcgagagcacaaaggggagctcgttgaggaactggccaaaactatt
gtgcaaaaaattattaatcggaagaagactttggctgacatgagggcagagtatgtccag
gactggccagttgaacacaacactgaccttcatcatcaccatcagtccgccagtgatcgt
gccaccagctccgtcaaacagcaaccaggcctctttagatcacactccgccttctcactg
ttggagaacgactctcccgggatggttcaagactctccaaaggcgtcagtgaaggaagac
ggtggtcccgctatgacagcttggaagagtgtagaccggctggacaacgcaggcgtctcc
gcagttcttcacagcatggatgggaactggattgccctgcagagcgcccagctgtcgcgt
cccagcctgctgacgaagaggaagagccaggtctacagtgccttggagagggagtctgca
gtggtgtccgcctacgaaggcatgggctccgacaacgacatcaaacacgggtcggacagc
tctttgggtaccgccctccaggaggtccacaggaagatggtggactcgaacatggatctg
caggacacctgcgacaggatcctgtccccgctgatgagccgccgagccagcggagacaag
ctcctgtcccccatgttgggccgcagaagcagcagggacatcgtgctctctgactctgag
gggaactggaagccgaacaaacctctgctcggtgtcataaagctgaaggtgcccgcagag
atcaggagacctccttcccgcaggaccagcatcatcgatatgaacttcaacacggaggga
gtcagacaggaagagaacatgggggctgcggagagatcacagcagaagaagaagagcgag
aaagagtcgtcttctctgaataacagcaaaaaagacaaccatccaccagaagctgtgact
cccgacactttgtcctctggaggtatgacgacccctgaaatactggaacttcagactgac
atcactggacaggtagccaatcagatggaccaggagctcacggccaaactagaacagctc
gctggccgagtggatgactcatccactggagaagaaaaagaagctgtctatggagatgct
gttgatgatggacgaagagaggaagaggaggataaggacagcgacgaagaagatgagcag
cagcaaaggatggaggtcgagtcggatgagggaagaactgaggacgaggagaaagaggag
gaggaagggaatgaagaagatgacgaggagataaattacagattaaacaagctgatcact
cagtccaggctcaagtacttctcttccactgatgaggagttagacaaagctggcaagagt
gaagaagaagaagaagaagaaggaggagagggagataaggatgaagatacagaggaggaa
cagaatgaggagagggaggaaaagacaaacggttttacatttaaactctgtcagctggaa
aaagaatcccgggcgtaccagttctcctccacagaggacgagatggacagagttggcatc
gaagagaagacagaagatgaggaggaaaacgggaagaatgtggagctggcggttaaagtg
tgcagattagcttaccaagtaaacgccaaccagttttcctccacggaggacgagctagac
agtgttggccttttggacgaagacatgaagacaagagaggaggaggaggaggaggaggag
gatgagaagaaagaagagctggcgttgaaagtgtgccgattagcacatcaagtcaacgcc
agccaattttcatccactgaggacgagctggaccgagtgggcagaggtgaagaagaggag
gaggggacagacgaggaggcactgtggaaactgcgggcggagaaggccgtccaggccgct
cacatgcgtgatttagccagtctagttggtgcttctgagttttcttccactgaggataat
ctggataaagttggacagacggggcaggaggtaaacaaagtgacaggaagtgatatgtgg
gagaacgcagagggaaataatcaagacaaggaggaatccttcgaggatttggatgtgaac
atgtttgatttaagggatgaaatcgaggagaaaaagaaagggagcagtgatgaaacagtg
gaggaaaagagagatggcatggaggacggagtcacagaggagggtgaggtattaaaaggc
actgaaagggcaagagatgcagagacggagttaaaaactgtggacgagggcaaggagata
ataaaagttgcagaagagaatcagccgggggcaagacaggaagacgataaaattgacgaa
agcagtggcagtcagggaagctgggagacggcaaaagatgaagaaaacagtgaggaatac
gcagagtttgacaggatcatcagcagcatgttgatgatgactctggaggacatgcaggta
cagacggtaaatgacgaagcagctgaaaatggaggaaacgtgagcgagcaagcgcaagtc
aaggtggacgagaacgtacaaatagagggagggagtggttcagtggatagggaagtgaca
atagggaacgaaagtgagttgatgcatgtggaggtggacgaggaagtcaaaaaaggggga
gaaagtgaattggagcatgtcaaggtagatggagaagtccaaactggggcagagagtgga
ttggagaatgtagagatggatgtggaattcaaaatcgagggagaaagtgaagttcaggat
cggatgattgatgcacaaagcacagaagacaccaaggagacagaaagtaaaaaagaattg
gaaagtccaagcgagaatgctccacagtcatatgcggaggaaaacccagaggcaaatatt
cagaaacaagaggagagtgaagatgctaaaggcagaaaagacaacgagcagggaaaagaa
agtgatccacacgcgataagatctccagcaaagactgcagttatgtccatcaaagagatg
ctggagacatacgaggccaaacagttgtgtcaaagaataggactgcatgacgacaagcaa
caggacagaggaggaaaagtctccaccatgcgtctgatgatggaggcacagagtgatgtc
acagaggaaaggatggaggaaactaaaggaaagaaaacatgcagaaaagatcagagcagg
aggtcttctctggatgatgttttacagacaccagaggagattcaaatgagctcctctgca
gtgcaaagaataggactgcatgatgacaaacaggacataggaggaaaagtctccaccatg
ctacagatgatggaggcacagagtgacatcgcagaaaccaaggaaaggatggaggaaact
aaaggaaagaaaacgtacaaaaaagatcagagcaggaggtcttctctggatgatgtttta
cagacaccagaggagattcaaatgaggtactctgcagtgcaaagaataggactgtatgat
gacaaacaggacataggaggaaaagtctccaccatgctacagatgatggaggcacagagt
gatgtcacagaaacaaaggaaaggatggaggaaactaaaggaaagaaaacgtacagaaaa
gatcagagcaggaggtcttctctggatgatgttttacagacaccagaggagattcaaatg
aggtactctgctgtgcaaagaataggactgcatgatgacaaacaggacaaaggaggaaaa
gtctccaccatgctacagatgatggaggcacagagtgatgtcacagaggaaaggatggag
gaaactaaaggaaagaaaacatgcagaaaagatcagagcaggaggtcttctctggatgat
gttttacagacaccagaggagattcaaatgaggtactctgcagtgcaaagaataggactg
catgatgacaaacaggacataggaggaaaagtctccaccatgctacagatgatggaggca
cagagtgatgtcacagaggaaaggatggaggaaactaaaggaaagaaaacgtacagaaaa
gatcagagcaggaggtcttctctggatgatgttttacagacaccagaggagattcaaatg
aggtactctgctgtgcaaagaataggactgcatgatgacaagcaggacaaaggaggaaaa
gtctccaccatgcttcagatgatggaggcacagagtgatgtcacagaggaaaggatggag
gaaactaaaggaaagaaaatgtgcaaaaaagatcagagcaggaggtcttctctggatgat
gttctacagacaccagaggagattcaaatggatagtgacatggacatatacaaaactcta
gagttcatatcgactctgctggagcagaggtactctgcagtgcagttgcggaacatcacc
accgaggtcctgaaggtgctaaacaccactgaagacctgctgcatggggtgaagggagga
gacaagctcaggtcctctaccccctcactgccccccaacactgaccccagaaaactggac
cagcagttctccaaactggaggagaacgtgtacgtggcagcgggctcagtttacagtctg
gaggcagagctcggtgacctggaggagtgcgccaggagcatcagtggatctacgtcagac
atggagctctccttcctggaggagcaggtggcctcagcagctgccaaagttcaacagtct
gatctgcagatttgtgacatctcagccagaattgcggctttgaagaatgcagggctcaat
gtggacacacagtcccgccccacaaaggccaggacgatcccagtgatgcctgtcaccctg
gactcatccagacagtttaggaggagattacctgcaccacctgtgaaggataaagaaacc
taa
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