Labrus mixtus (cuckoo wrasse): 132979983
Help
Entry
132979983 CDS
T10666
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix04142
Lysosome
lmix04144
Endocytosis
lmix05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132979983
04142 Lysosome
132979983
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132979983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132979983
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmix04147
]
132979983
Membrane trafficking [BR:
lmix04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
132979983
Exosome [BR:
lmix04147
]
Exosomal proteins
Proteins found in most exosomes
132979983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
132979983
NCBI-ProteinID:
XP_060901789
LinkDB
All DBs
Position
9:complement(659645..741952)
Genome browser
AA seq
1676 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDLADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVSFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQTVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANIPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRLSPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGQLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDTELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHISNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKAEDPSAYMEV
GQAAAQGGNWEDLVKFLQMARRKARESFVETELIFALAKTNRLAELEEFVNGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPADAWKEGQFKDIVTKVANVELYYKTVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNILFINEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLEE
DNKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLEASESLR
KQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQAYGYGYTAPGYGQPQQPSFGYGM
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaattctacctatccgcttccaggagcacctgcagctccagaacctgggaatt
aacccagccaacattggattcagtactcttaccatggagtcggacaagttcatctgtata
agggagaaagtaggtgagcaggcccaggttgtcatcattgatttggcagaccccaacaac
cccatacgcaggcccatctcggcagacagtgccatcatgaatcctgccagcaaagtaatt
gcccttaaagctgcaaagaccctgcagatctttaacattgagatgaagagtaaaatgaag
gctcatacgatgacagatgacgtgagcttctggaaatggatctccctaaacactgttgcc
ctagtcacagacaatgcagtctatcattggagcatggagggtgactctcagccagtcaaa
gtctttgaccgccattccagtctggcaggctgccagatcatcaactatcgcactgatgca
aaacagaagtggttgctgctcattggcatttcagcacagcaaaaccgtgttgtcggggcc
atgcagctgtactctgttgacaggaaggtgtctcagcccatcgaggggcatgctgctggc
tttgcacagttcaagatggaaggcaacactgaagagtcaacccttttctgctttgctgta
agaggacaggcaggaggaaaactgcatatcattgaagttgggactccgccaactgggaac
cagccatttccaaagaaagctgttgatgttttctttcctccagaagcacagaatgacttc
cctgttgccatgcagatcagctccaagcaagatgttgtctttctcatcaccaaatatggt
tacatccacttgtatgacctggagaccggaacatgtatctacatgaacaggatcagtggg
gagaccatttttgtaactgccccccatgaacctacagctggtatcattggagtcaacagg
aaaggacaggtgttgtcggtttgtgtggaggaggaaaacatcattccctacatcaccaat
gtcctccagaacccagacctggctctacgtatggctgtccgcaacaatctagctggtgct
gaggagctgtttgcccgcaagttcaacacgctctttgcagcagggaattactcagaagca
gccaaggtggcagccaatgcacccaagggtattctgcggaccccagacaccatccgtagg
ttccagactgttccagcccaaccaggccagacgtctcccttgctccaatacttcggaatc
ttgctggaccaaggccagcttaataagtttgagtctctggagttgtgcaggcctgttctc
cagcagggacgcaagcagctactagagaaatggttaaaagaggacaagctggagtgctct
gaggaacttggagatttggtgaagtcagtagatcctactcttgcccttagtgtctaccta
agagccaacatcccaaataaggtgattcagtgctttgcagagactggacagttccagaag
attgtcctctatgccaagaaggtgggctacactccagactggattttcttgttaaggaat
gtaatgcggctcagtccagaacagggcctccagttttcccagatgctggttcaggatgaa
gagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctcattcag
cagtgcacatctttcttacttgatgccttgaagaacaacaggcccacggaaggtcaactg
cagacacgactgctggaaatgaatttagtccacgcaccacaggttgcagatgccattctc
ggaaatcagatgtttacccactatgaccgcgcccacgttgcacagctgtgtgagaaggct
ggtctcctgcagagggcgctggagcattataccgacctgtatgacattaaacgtgctgtg
gtgcacacacatcttctcaatccagagtggttggtgaatttctttggttccttgtcagtg
gaggactctttagagtgtctgagggcaatgctatctgcaaacatccgtcagaacctgcag
atctgtgtccaagtcgcttccaagtatcacgagcagctctctacacagtccctgactgaa
ctttttgagtcgttcaagagctttgagggtttgttctacttcttgggatccattgtgaac
tttagccaagatccagaggttcacttcaaatatatccaggctgcctgcaagacaggccag
atcaaagaagtggagagaatctgcagagagagtaactgctatgaccctgaacgtgtgaag
aactttcttaaggaagccaagctcactgaccaactgcccttgatcattgtatgtgaccgc
tttgattttgtccatgatctggtcctgtacctgtacaggaacagcctgcaaaagtacatt
gagatctatgttcagaaggtgaaccccagccgtctccccgtagtcattggagggctactg
gatgtggattgtgcagaggatgtgattaaaaacctgataatggtggttcgaggacagttc
tccacagatgaactggtggctgaagtggagaagagaaatcggctgaagctgctgctgcct
tggttggaggctcgtattcatgaaggttgcgaggagcctgcgacccacaacgccctggcc
aagatctacatcgacagcaacaacaaccctgaacgcttcctgagggagaacccctactat
gacagccgggtggttggcaagtactgtgagaagcgagacccccaccttgcctgtgtggct
tatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgaaaactcactgttc
aagagtctgtcccgctaccttgtacgtcgcaaagacacggagctgtgggcaagcgtgctg
ctggagaccaacaattacagaaggccacttattgaccaggttgtccagacagctctgtct
gagacccaggatccagaggaggtgtctgtcacagtcaaggcctttatgactgccgacctc
cccaatgagctcattgagcttctggagaagattgtccttgataactctgtctttagcgag
cacagaaacctccagaatcttcttatcctgacagctattaaagctgatcgtacacgtgtt
atggagtacatcaaccgtcttgacaactacgatgccccagacattgcaaacatcgcaata
agtaatgaactgtttgaagaggcttttgctatttttcgaaaatttgatgtcaacacctct
gcggtgcaggttctgatagagcacatcagtaacctggatagagcttatgagtttgctgag
cgctgcaatgagccaccagtgtggagtcagctggcaaaagcccagctccagaaaggcctg
gtcaaagaagcaattgactcttacatcaaggccgaagacccctctgcttacatggaagtg
ggacaagctgctgcccaaggtggaaactgggaggacctagtgaagtttcttcagatggct
cgtaggaaggcccgtgagtcttttgttgaaacagagttgatctttgccttggcaaagaca
aaccgcctggctgaactggaagagttcgtcaatgggcccaataatgctcacattcagcaa
gtgggtgaccgttgctatgatgataaaatgtacgaggcagctaaactgctttacaacaat
gtgtccaactttggccgcctggcttccacgctagtgcacctgggagagtaccaggcagct
gtggatggagctcgcaaggccaacagcacccgtacatggaaagaggtgtgttttgcatgt
gtagatgggaaagagttccgcctcgcccaaatgtgtggcctgcatattgttgttcatgca
gatgaactcgaggaactcatcaactactaccaggatcgaggctactttgaagagctaatc
actatgctggaggctgccttaggtctagagcgtgcacacatgggtatgttcactgagctg
gctatcctgtactcaaaatttaaaccccaaaagatgagggagcacctggagcttttctgg
tcccgtgtcaacattccaaaggttcttagggcagcagagcaggcccacctttgggccgag
cttgtgtttctctacgacaagtacgaggaatatgacaatgccatcatcaccatgatgaat
cacccagctgatgcatggaaggaaggccagttcaaagacattgttacaaaggtggccaat
gttgagctgtactacaagacagtacagttttatctggagtttaaaccattgctactcaat
gaccttctcatagttctctccccaagactggaccactcacgtgctgtcaacttttttagc
aaggtgaaacagctgcctctggtcaaaccttacttaaggtctgtccaaaatcacaacaac
aagtcagtgaatgaggcactcaacatcctctttatcaacgaggaagactatgcggcactg
cgtacttcgattgatgcctatgacaattttgacaacatttcattggcccagggcctggag
aagcacgagttgattgagtttagaaggattgcagcctatcttttcaagggcaacaaccgc
tggaaacaaagtgttgagctgtgcaagaaggacaagctttacaaggatgccatgcagtat
gcatcagagtcaaaagacactgagctggcagaggagcttctggcttggtttctagaggaa
gacaataaggagtgttttgcagcctgcctatttacctgctacgacctactgcggcctgac
gtggtgctggagaccgcatggcgacataacattatggacttctcaatgccatacttcatc
caggtcatgagggagtatctctcaaaggttgacaaactggaagcctctgagtccttgagg
aaacaggaggagcaggctaccgagtctcaacccattgtttatggcacaccccagctaatg
ctcacagcagggcccaacgtggcggtgcctcctcagcaggcttatggttatggctacacg
gcaccaggatatggtcagccacagcagcccagctttggttatggcatgtaa
DBGET
integrated database retrieval system
