Labrus mixtus (cuckoo wrasse): 132980348
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Entry
132980348 CDS
T10666
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lmix Labrus mixtus (cuckoo wrasse)
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmix04131
]
132980348 (vps53)
Membrane trafficking [BR:
lmix04131
]
Protein recycling
Others
EARP complex
132980348 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
132980348 (vps53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Syndetin_C
FBF1
GrpE
IFT74
NBD94
Motif
Other DBs
NCBI-GeneID:
132980348
NCBI-ProteinID:
XP_060902417
LinkDB
All DBs
Position
9:15280588..15305540
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AA seq
831 aa
AA seq
DB search
MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIGQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPAQGSKRTGGPSNVLRD
ACLVANVLDPRIKQEVIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERISVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDVPGQKRPESPLESTNPFLEDEQGEDVGTEKDEDLAKPRKPKAPDNPFHGIV
SKCFEAHLYVYIESQDKNLGELIDRFVSDFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSVGLTISSLLKEKEGSEA
AKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKILVERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVNRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGPSLSFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaatttgaatttgctgaggatttggaggctattttgcatctaacc
ccagaggtgcaattagccattgaacaggtcttccccagccaagaccccctggacagagca
gacttcaatgctgttgaatacatcaacacactgttccccactgagcagtctctggctaat
attgatgatgtggtaaacaagattcgtctgaagattcggcgcctggatgacaacatcagg
acagtagtgagaggccagaccaatgtgggccaggatggcagacaggctttggaggaggcc
cagatagccatcggacagctctttggcaaaataaaagacatcaaggacaaggcggagaag
tctgaacaaatggtaaaggagatcacgagagacataaagcagctggaccatgccaagcgc
cacctcactacatccatcactaccctcaaccacctgcacatgttagcagggggcgttgac
tctttagaagccatgaccagaaagaggcagtatggggaggtggccaacctgctgcaggga
gtggtcaacgtgcttgaacatttccacaagtacatgggcataccccagatcagacagctt
tctgagagggtaaaggctgcacagagtgagctggggactcagatcctggcagattttgaa
gaagccttccccgctcagggctccaagagaacaggaggtcccagtaacgtgctgagagac
gcctgtctggtagccaacgtgctggacccacgcatcaagcaggaagtcatcaagaagttt
atcaggcaacacctttcagagtatctggttctatttcaagaaaaccaagatgttgcatgg
ttagacaagatcgaccgccgctatgcctggatcaagcggcagctggtggactacgaggag
aagtatggacgcatgtttccagaggagtggtgcatgaccgagcgcatttctgtagagttc
tgtcacatcaccagggtggagctagctaaagtcatgcgaacacgtgctaaggagatcgag
gtgaagctgcttctgtttgctatccagaggaccacaaactttgagggtcttctggccaaa
cgttttacaggatgcaccttgactgacgtacctggacaaaagaggccagagagccctcta
gagtccactaaccccttcctggaggacgagcaaggcgaagatgttggcacagagaaggat
gaggatctggctaagcccaggaagccaaaagctccggacaaccctttccacggcattgtc
tccaagtgctttgaagcacatctatacgtctacatagaatctcaagacaagaacctgggc
gagctgatcgatcggtttgtgtctgacttccgagcgcaaggcccacctaaggcgggtaca
gaggagggaggagcagtcctgcccagctgcgctgacctctttgtctactacaagaagtgc
atggtgcagtgctcccaactgagcaccggagaaccgatgattgccctcacgaccatcttc
cagaaatttctgagagagtacgcctggaaaatcctctccggcaacctgcccaaatccagc
agtaacagtgtgggtcttaccattagcagtctgctaaaggaaaaagaaggctcagaggct
gcaaagttcaccgtcgacgagctgtgcctgatctgtagcatccttagcactgcggagtac
tgcctggctaccacacaacagttggaagagaagcttaaagagaaagtcgataaaatcctg
gtggaaagaattaatctcaccggggagatggatacatttagcacagttatctcgaatagt
atccagctacttgttcaagaccttgatgctgcctgtgaccctgctctgactgccatgagc
aagatgccgtggcagagcgtggagcatgtgggtgaccagagtccttatgtgacgtcaatc
atcatgcacatcaagcaaaacgttcccatcatcagagacaatctggcctccacgcgcaaa
tacttcacacaattctgcatcaagttcacaaattctttcattcccaagtttatcaaccac
ctgttcagatgtaagccaatcagcatggtgggagctgaacaactcctcctggacactcac
tcccttaagacggtcttgctggatctgccgtccataggctcccaggtgaaccgcaaggcg
cccgccagctacaccaagatagtggtgaagggcatgacccgagcagaaatgattcttaag
gtggtgatggccccacatgaaccgccagtcgtgtttgttgataactacatcaagctcttg
gctgatgggaatccggaaaccttccagaagattctcgacatgaagggtctgaagcgcagt
gaacagagcagcatgctggagctcttcaggcagaggctacccactccaccctctggcgca
gatggcggcccctctctttccttcagtacccccacccctgagcaggagtcctcccgcatc
cgcaagctagagaagctcatcaagaagagactgtga
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