Labrus mixtus (cuckoo wrasse): 132980370
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Entry
132980370 CDS
T10666
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132980370 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmix03041
]
132980370 (prpf8)
Spliceosome [BR:
lmix03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
132980370 (prpf8)
Complex C
U5 SnRNP specific factors
132980370 (prpf8)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
132980370
NCBI-ProteinID:
XP_060902445
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All DBs
Position
9:complement(15684306..15702086)
Genome browser
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPPGMPPGVPPPAPVPDYMTEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDTEEDSSCVEWFYEHQPLKDTTKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDHTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccttcccctacagaggggttcctcctgggatgccaccaggtgtaccccct
cctgcgcctgtcccagactacatgacagaagaaaaactgcaagagaaagcaagaaaatgg
caacacttgcaagcaaagcgctactcggagaagagaaagtttggctttgtggatgctcag
aaggaagacatgccacctgagcatgtccgcaagatcatcagggaccatggcgacatgacc
aacagaaagtttcgtcatgacaagagggtatatctgggtgccctgaagtacatgccccat
gcagtgctgaagctgctggaaaacatgccgatgccctgggaacagatcagagatgtgccc
gtcctctaccacatcactggggctatttcctttgtgaatgaaatcccttgggtcatagag
ccagtctacattgctcagtgggggaccatgtggatcatgatgcgtcgtgagaagcgggat
cgtcggcacttcaagaggatgcgatttcccccatttgatgatgaggagccgccgctagac
tatgctgacaacatccttgatgtggaaccactggaggccattcagatggagctggacacc
gaggaagactcctcatgtgtggagtggttctatgagcaccagcccctcaaagacacaact
aagtttgtgaacggcaccacgtaccgtcgctggcagttcacactgcccatgatgtcaaca
ctgtaccgcctggccaatcagcttttgactgaccttgtggatttcaactacttttatctg
tttgacctcaaggccttctttacttcaaaggccttaaatatggccatcccaggggggcca
aagtttgagccgctggtcagggacatcaaccttcaggatgaagactggaacgagttcaat
gacatcaacaagatcatcattcgtcagccaatcagaacggagtacaaaatcgccttccca
tacctgtacaacaacttgccacatcatgttcacctcacctggtatcacacacctaatgtg
gtgtttatcaagactgaggatccagatctcccagcgttctactttgacccgctgatcaac
cccatttcacacagacactctgtcaagagtcaggagcctctaccagatgatgacgaggag
tttgagctgcccgagtacgtggaacccttcctcaaagagaccccgctctacacagaccac
acagctaatggcatcgctctgctgtgggcgccacggccattcaacctccgatccgggcgc
acaagacgcgccattgatatcccactgatcaaaaactggtaccgggagcactgccctgca
ggacagccagtgaaagtacgtgtgtcataccagaaactgctcaagtactatgtactcaac
gccctcaaacacagaccaccaaaggcccaaaagaagaggtatctgttccgctccttcaag
gccaccaagttcttccagtccaccaagctggactgggtcgaggtgggtctgcaggtgtgc
agacagggctacaacatgctcaatctgctcatccaccgtaagaacctcaactacctgcat
cttgactacaacttcaacctgaaacctgtcaagacgctgaccacaaaggagcgaaagaag
tccagattcggcaatgccttccatctgtgcagagaggtgctgcgtctcagcaagctggtg
gtggacagtcacgttcagtacaggctgggaaatgtggacgccttccagttgtctgatggg
ctgcagtacatctttgctcatgtgggccagctgacaggcatgtaccgctacaagtacaag
ttgatgcgacagatccgaatgtgcaaagatctgaagcatctcatctactaccgcttcaac
actggtcctgtgggtaagggtccaggttgtggcttctgggctcctggctggagagtgtgg
ctgttcttcatgagggggatcactccgctgttggagaggtggctgggaaatctgctggcc
aggcagtttgaaggacgtcactccaaaggcgttgccaagacggttaccaaacagcgcgtg
gagtctcactttgacctggagctgcgtgctgctgtgatgcacgacatcttggacatgatg
cctgagggtatcaaacagaacaaggccagaaccatcctgcagcacctcagtgagtcctgg
aggtgctggaaggccaacatcccttggaaggtgcctggtctgcccacgcccattgagaac
atgatcctgcgctatgtgaaggccaaagctgactggtggaccaacaccgcccactacaac
cgtgagcgaattcgccgtggagccacagtggacaagacggtgtgcaagaagaacctggga
agactgacccgtctgtacctgaaggctgagcaggagagacagcacaactacctgaaggat
ggaccctacatcacagctgaggaggcggtcgccatttacaccaccaccgttcactggctg
gagagtcgtcgattctctcccatccctttccctccactgtcctacaaacacgacaccaag
ctgctcatcctggcattagaaaggctcaaggaggcatacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctggggctgatcgagcaggcgtacgacaatcctcacgaggcc
ttgtccaggatcaaacgtcaccttctcactcagagagcgttcaaagaggtgggaatcgag
ttcatggacttgtacagtcaccttgtgcctgtgtatgatgtggagcccctggagaagatc
actgatgcctacctggaccagtacctgtggtacgaggcagacaagagacgcctgttccca
ccctggatcaaacctgccgacactgaacccccacctctgctggtctacaagtggtgtcaa
ggtatcaacaacctgcaggacgtgtgggagactgctgagggggagtgtaacgtgatgctg
gagtctcgctatgagaagatgtacgagaagattgatctgacgctgctcaacaggctgctg
cgactcattgttgaccacaacatcgctgattacatgaccgccaagaacaacgtggttatc
aactacaaggatatgaaccacaccaactcctatggcatcatcagggggctccagtttgcc
tcattcatagttcagtactacggcctggtgatggacctgctggtgctcggcctgcaccgt
gccagcgagatggccggaccacctcagatgcccaacgacttcctgagtttccaagacaca
gccacagagagcgctcacccgatcagactgtactgccgctacatcgaccgcatccacatc
ttcttcaggttttctgctgacgaagccagggatctgatccagaggtaccttacagagcac
ccagaccccaacaacgagaacattgtgggctataacaacaagaagtgctggccccgtgat
gctcgcatgagactgatgaagcacgatgtcaaccttggacgtgctgtgttctgggacatc
aagaaccgcctgcccagatcggtgaccacagttcagtgggagaacagctttgtttcagtg
tacagcaaagacaaccctaacctgctgttcaacatgtgcggctttgagtgccgcatcctg
cctaaatgtcgcaccagctatgaggagttcactcacaaggacggtgtgtggaacctgcag
aacgaggttaccaaagagaggacagcccagtgtttcctgcgtgtggacgatgaatccatg
cagcgtttccacaacagagtgcgtcagattctgatggcttctggatcaaccacattcaca
aagattgtgaacaaatggaacacggctctgatcggtctgatgacatacttccgcgaggcc
gtggtgaacacacaagagctcctggacctgctggtgaagtgtgagaacaagatccagacc
cgtatcaagatcggcctgaactccaaaatgccgagccgtttcccccctgtggtcttctac
actcccaaagagttgggcggccttggcatgctgtccatgggccatgtgctcatcccacag
tcagacctgcggtggtccaagcagacagatgtgggtatcacccacttcaggtctggaatg
agccacgaagaagaccagctgattcctaacctgtatcgttacattcagccatgggagagc
gagttcattgactcccaaagagtgtgggctgaatatgctctcaaaagacaggaggccatc
gcccagaacagacgtctgacccttgaagatttggaggattcttgggacagaggaatcccc
cgtattaacacacttttccagaaggacagacacacactggcatatgacaaaggctggcga
gtcaggaccgatttcaaacagtatcaggtgttgaagcagaatccattctggtggacccac
cagaggcacgatggtaaattgtggaacctgaacaactaccgcacagacatgatccaggct
ctcggcggtgtggagggcatcctggaacacacactcttcaaaggcacttacttccccacc
tgggagggtctcttctgggaaaaggccagtggctttgaggagtccatgaaatggaagaag
ctgaccaatgcccagaggtctggtctgaaccaaatccccaaccgtcgcttcacactgtgg
tggtcccccaccatcaacagagcaaacgtgtacgtgggtttccaggtgcagcttgacttg
accggaatctttatgcatggcaagatccccacactgaagatctccctcattcagatcttt
agggctcacttgtggcagaagattcatgagagcgttgtcatggatctctgtcaggtgttt
gatcaggagctggacgctctggagattgagacggtacagaaggaaaccatccaccccagg
aagtcctacaagatgaactcgtcttgtgcagacatcctcctatttgcatcgtacaaatgg
aacgtctctcgaccatctctgcttgcggactcaaaggatgtgatggacagcaccaccaca
cagaagtactggatcgacattcagctgcgctggggtgactatgactcccatgacatcgag
cgctacgccagagccaagttcctggattacaccaccgacaacatgagtatctatccctca
ccaacaggggtgctcattgctattgacctggcttacaatctccacagtggctatggtaac
tggttccctggaagtaagccactgatccagcaggccatggccaaaatcatgaaggccaac
cccgccctgtatgtgctcagggagcgcatccgcaaaggtctgcagctgtactcttcagag
cccacggagccctacctatcctcacagaactacggtgaactcttctccaaccagatcatc
tggtttgtagatgacaccaatgtgtaccgagtcaccatccacaagacctttgagggtaac
ttgaccacaaagcccatcaatggagccatcttcatcttcaaccccaggaccggtcagctc
ttcctcaagatcattcacacttctgtgtgggctggacagaaacgtctgggacagctggca
aagtggaagacagctgaagaagtggctgccctgattcgctccctccctgtggaagaacag
ccgaaacagatcattgtaaccaggaagggcatgctggatcctcttgaggtccacttgctc
gacttccctaacattgtgatcaaaggctctgagctgcagctgccgttccaggcctgtctg
aaggtggagaagtttggagaccttatcttgaaggccacagagcctcagatggtgctgttc
aacctctacgacgactggctcaagaccatctcatcttacacagccttctcccgactcatc
ctgatcctcagagcgcttcacgtcaacaacgaccgtgccaaggtgatcctgaaacctgac
aaaaccaccatcactgagccccatcacatctggcccacgctcactgacgaggaatggata
aaggtggaagtgcagctcaaagacctcattctggcagattacggaaaaaagaacaatgtg
aacgtggcttcactcacgcagtctgagattcgtgacatcatcctcggtatggagatctcg
gctccgtcacagcagcgtcagcagatcgcagagattgagaagcagaccaaagagcagtca
cagctcacagccacgcagacgagaactgtcaacaagcacggcgacgagatcatcacctcc
accacctccaactacgagacccagaccttctcttccaagaccgagtggagagtcagggcc
atatctgctgccaacctccatctccgaacaaaccacatctacgtgtcctctgatgacatc
aaagagacgggctacacctacatcctgcccaaaaatgtcctcaagaagtttatctgtatc
tcagatctgcgagcacagattgcaggctacctgtatggcaccagcccaccagacaacccc
caggtgaaggagatccgttgtatcgtcatggtgccacagtgggggactcaccagactgtc
cacctgcccaaccagcttcctggtcatgaataccttaaagaaatggagcctcttggctgg
atccacactcaacctaatgagtcgcctcagctgtccccgcaggacgtcaccacccatgcc
aaggtcatggctgacaatccttcttgggatggagagaagaccatcatcatcacttgcagc
ttcacccccggctcatgcacactcacggcctacaagctaacacccagcggttatgagtgg
ggtcgacaaaacacagacaagggaaacaaccctaaaggctacctgccgtcccactatgag
agagtgcagatgctgctgtctgatcgcttcctgggcttcttcatggtgcctggccaggtg
tcctggaactacaacttcatgggtgtgcgccatgaccccaacatgaagtatgacctacaa
ctcgccaaccccaaggagttctaccatgaagtccaccggccctcgcacttcctgaacttt
gcctcgctgcaagagggggagatctacaatgcagaccgggaggacatgtatgcctga
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integrated database retrieval system
