Labrus mixtus (cuckoo wrasse): 132980579
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Entry
132980579 CDS
T10666
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132980579 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmix03019
]
132980579 (dhx36)
03012 Translation factors [BR:
lmix03012
]
132980579 (dhx36)
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
132980579 (dhx36)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
132980579 (dhx36)
Translation factors [BR:
lmix03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
132980579 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
DUF7428
Motif
Other DBs
NCBI-GeneID:
132980579
NCBI-ProteinID:
XP_060902763
LinkDB
All DBs
Position
9:20052490..20077168
Genome browser
AA seq
1088 aa
AA seq
DB search
MSYAYGGGGGGGGGGGRRGRRGGRGHRDGSRERWDRGGRGGSRGHSSDFDPDRGGGGGGG
GGGGEGGQRDRPPPHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNS
VQNDQHGPRKDGSGARASSSSNWQTTPSSSSGHCYFDGDNPEEDKVKVEIKSESEEEEID
QGQKTTNPKSRRYFSNAATKDEPPENWDEEEQLQLEEEREKRRSQDKDLEFLFHDIVRDN
ALDNSLKEDMQNKTSDPKYREFLKFREKLPSYGKKKELVELIRANRVLVVSGETGCGKTT
QVTQFILDDYINRGMGSMCRVVCTQPRRISAISVAERVSAERAESIGNGNSCGYQIRLQR
RLPRRQGSILYCTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLVIVKELLGLRE
DLKVILMSATLNAEKFSRYFDNCPMIHIPGLTFPVEEFLLEDVVEMTRYRPQSKDQRSSW
KKRFWQGRNSRPEKEEKEVEYQDSWPAYERTLHGRYSDSTISAVELLDGDDKIDLGLILA
LIRHIVLKDEEGAILVFLPGWDNISSLNDLLMAEQMFRSDRFVIIPLHSLMPTVNQTQVF
KKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAK
QRKGRAGRVRPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIAQFLAK
ALDPPTEQAVSLAIKSLLDLNALDNEENLTPLGFHLARLPVEPHIGKLILFGALLGCLDP
VLTIAASLSFKDPFFIPLGKEKMADMRRKVLSKNSKSDHLTILNAFQGWEEAKRRGARYE
REYCWDNFLSANTLQMLNNMKGQFAEHLMHTGFVSSKDPRDPKSNVNSDNEKLIKAVIVA
GLYPKVAMIKPSHSRKRPGVKVYTQADGKVCIHPKSVNAEETEFNYKWLIYHLKMRTSSI
FLYDCTEVSPFSLLFFGGNITIQTEEDQETIAVDKWIVFRSPARIAHLVKSLKRELDSLL
EEKIRSPAPVDWQNRQSKDCAVITAIIDLITTQEKPSGSAQGYDRPWASAPRGHHTYFND
KDDEDDDD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgcgtatggcggtggaggtggtggtggtggtggtggtgggagaagaggcaga
agaggaggtcgagggcacagagatggaagtagagagaggtgggacagaggaggtagagga
ggctcaagaggacacagttctgactttgacccggaccgaggaggtggaggaggaggagga
ggtggtggtggtgaaggtggacaacgggaccgacctcctccacacctgaaaggccgagag
attggtctgtggtacgcaagatacggagctgtgaggaggaaacaagctgaccggagatcg
cgggcggtggtccagatggatgaggccagagagcagcacattaccaagctgctaaactcc
gtccagaatgatcagcacggtccaaggaaagacggcagcggtgcaagagcctcttcttct
agcaactggcagactactcccagcagtagtagtggtcattgttactttgatggggacaat
cctgaagaggataaagttaaggttgagatcaaatctgaatcagaggaagaagaaattgat
caaggccagaagacaactaatcccaaatcacgacgttacttctcgaatgcagccacaaaa
gatgaacctccagaaaactgggatgaggaagagcagttgcagctggaggaggagagagag
aaacggagaagtcaagataaggatctggagttcttatttcatgacatcgtcagagacaat
gcattagacaactcccttaaggaagatatgcagaacaaaacatcagatccaaagtacaga
gaatttctgaaatttagggagaaacttccatcctatgggaaaaaaaaggagctggtggag
ctgatcagagcgaaccgtgttctggttgtgagtggagaaacaggatgtggaaagacgact
caggtcacccaattcatccttgacgactatataaacagaggcatgggctcgatgtgtcgt
gtggtctgtacacagcctcgacgcatcagtgccatctcggtggcagagcgtgtctcagca
gagagggcagagagtatcggcaatggaaactcttgtggataccaaatccgtcttcagaga
cggttaccacggcgacaaggttcaatcctgtactgtacaacaggaattatacttcagtgg
cttcgctcagacccattgctgtccagtatcagccacctcgtgttggacgagatccacgag
cgaaacctgcagtctgacgtgttgctcgtcatcgtgaaggagctactcggcctccgagaa
gatctcaaagtgatcctcatgagtgccacgctcaacgcagaaaagttctctagatatttt
gacaactgcccaatgattcacatccccggtttgacgttcccagtggaagaattcctgctt
gaggacgtcgtggagatgacgaggtatcgcccccagtctaaggaccaacgctcctcatgg
aagaaacgcttttggcaagggcgaaactccagacctgaaaaggaagagaaggaggttgaa
taccaagacagctggcctgcttatgaacgcacactgcacggcaggtactctgatagcacc
atcagcgcagtggagttgttggacggcgatgataagattgacttggggctgatcctggca
ctgattcgtcatattgtgctcaaagatgaggaaggagcaatcctggtcttcctgcccggc
tgggacaacatcagcagcctcaatgacctgctcatggctgagcagatgttccgatcagac
cggtttgttatcatccccctgcactccctcatgccaaccgttaatcagacgcaggtgttc
aaaaagcctcctccaggagttcgaaagattgttattgctaccaatatagctgagaccagc
atcaccatcgatgacgttgtctatgtgatagatggtggtaagattaaggagaccaacttt
gacaccaacaacaacatcagcaccatgacagcagagtgggttagcctcgccaatgccaaa
cagaggaaaggacgtgcgggcagagtgcgtccagggaagtgctatcatctgtacaacggt
ctcagggccagcctgctggatgcctatcaattacctgaaattatgaggacgccactggag
gagctctgtctgcagatcaagatattaaagctggggtccatagctcagttcttggcaaaa
gccctggaccctcccactgagcaggcggtatccctagccatcaaaagcctcttagacctg
aacgccctggacaacgaagagaatctgacacctctgggtttccacctggcccgtctacct
gtggagcctcacatcggcaaactcatcctgtttggagccctgctgggctgcctcgacccc
gtgctcaccatcgctgcttcactcagcttcaaagaccccttcttcatcccactgggtaaa
gaaaagatggccgacatgaggagaaaggtcctttccaagaactccaagagtgaccacctc
actatactcaacgccttccagggctgggaggaagccaaacggcgtggtgccaggtatgag
agggagtactgctgggacaacttcctgtctgccaatacactccagatgctgaacaacatg
aagggtcagtttgctgagcatctaatgcatacaggcttcgtcagcagcaaggatcccaga
gaccctaaatccaatgtcaactcggataatgaaaagttaatcaaggcggtgattgttgct
ggactatacccaaaggtggccatgatcaaaccctcccacagcagaaagaggccaggggtt
aaggtgtacacccaggctgatggaaaggtgtgcatccaccccaaatctgtcaatgctgaa
gagaccgagttcaactataagtggctcatctaccacctgaagatgagaacaagcagtatc
ttcctgtacgattgcaccgaggtgtccccgttctccctcctgttcttcggaggaaacatc
acgatccagacagaggaggaccaggagaccatcgcggtggacaagtggatcgtcttcaga
tcgccagcgcgcatcgctcacctcgtcaaaagtttaaagagagagctggattcactgcta
gaggagaagatccgtagccctgctcctgtggactggcagaaccgtcagtccaaagactgc
gctgtcatcacagccatcatagacctcatcaccacgcaggagaagccgtcaggcagcgct
cagggctacgacagaccgtgggcgtctgcccccagaggacatcacacttactttaatgac
aaagatgatgaagatgacgacgattaa
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