Labrus mixtus (cuckoo wrasse): 132980756
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Entry
132980756 CDS
T10666
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03266
Virion - Herpesvirus
lmix04514
Cell adhesion molecule (CAM) interaction
lmix04517
IgSF CAM signaling
lmix04520
Adherens junction
lmix05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lmix00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
132980756 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132980756 (nectin1b)
04517 IgSF CAM signaling
132980756 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
132980756 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132980756 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmix04515
]
132980756 (nectin1b)
04090 CD molecules [BR:
lmix04090
]
132980756 (nectin1b)
Cell adhesion molecules [BR:
lmix04515
]
Immunoglobulin superfamily
Nectin family
132980756 (nectin1b)
CD molecules [BR:
lmix04090
]
Proteins
132980756 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
ig
I-set
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
132980756
NCBI-ProteinID:
XP_060903047
LinkDB
All DBs
Position
9:25045097..25194623
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AA seq
552 aa
AA seq
DB search
MAMCVGMWILLLALHVQAGHGQMVQMDSSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
QLNGTKQNVAIANPALGVSVLPPFKERVTFKQAAVRHRTPSLEDTTIVFSNLQLSDEAAY
ICEYTTFPAGNRENTVNLTVYARPLTRMNLTTPTIVARAQKRKMTVATCSSSNGKPPSVI
KWDTRLKGEATFQETRNQNGTVTVRSNYVVVPSRETHRQRLTCIVSYRNERITDSVVLNV
QYEPEVKIEGFDGNWYLNRQNVQLTCRADANPPVTIYQWKLLNGSLPSNVEIRNNTLFFK
GLVTYDLAGTYVCDATNGIGTRTGIVDVNITEKPMPQGPPGGVIGILGGVVAIGLIIGVA
VTVVMVHRRQQKTRTETDNDLIAVAAVADSCVTQAPEKPESPTRTDLPPAHKPAPPPPKK
KNSDMKGHLTSDDIQVVHLDKDEEMQKLPLQPPYYDMAPSESTPFTDKPDSGRRPEEVLN
PAEYMSYQRVCNMDQFPESQPALAYPPVTFLPQHPYTQQPPSEPMYSNTSFPAPVPAPGP
RAPFTFPKEQSV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtgtgtggggatgtggatcctcctcttagcgctgcacgtccaagctggccat
ggacagatggtacagatggactccagtaagtcgggcttcgtgggatcacaagtggagctg
cgctgcattttcatcaacagtaacccaccggtcaagatctctcaagtcacctggcagaag
cagctgaacggcaccaagcagaacgtggccatcgccaacccggcgctcggcgtgtccgtc
ctgccgcccttcaaagagcgagtcaccttcaagcaggcggcggtccgccaccgcacgccc
tcactggaggacaccaccatcgtgttctccaacctgcagctgtccgacgaggccgcctac
atctgcgagtacacgacgttccccgcaggcaaccgggagaacacggtcaacctcaccgtg
tatgctcggcccttgactcgcatgaacctgacgacacccaccatcgtggcgagggctcag
aaacgcaagatgaccgtcgccacctgctcgtcgtccaacgggaagcccccgagcgtgatc
aaatgggacaccaggttgaagggcgaggccacgttccaggagacgcgcaaccaaaacggg
acggtgaccgtgcggagcaactacgtggtggtgccgagccgcgagacccacaggcagagg
ctgacgtgcatcgtgtcgtacaggaacgagaggatcaccgacagcgtggtgctcaacgtg
cagtatgaacctgaggtgaagatcgagggctttgatggaaactggtacctgaaccgtcag
aacgttcagctgacctgcagagccgacgccaacccccctgtcaccatctaccagtggaaa
ctcttgaacggctccctgcccagcaatgtggagatcaggaacaacactctgttcttcaag
gggctggtgacctacgacctggccggaacgtacgtgtgcgacgccaccaacggcatcggg
actcgcaccggcatcgtggacgtcaacattacagagaagccgatgccgcagggtccccca
ggtggtgttatcgggatccttggaggcgtcgtcgccattggactcatcattggcgtggct
gttactgttgtcatggtccatcggcggcagcagaagacccgcactgagacagataatgac
ctcattgctgttgctgctgttgctgatagttgtgtgacacaggctccagagaagccagag
tcccccacaaggaccgacctcccacccgcccacaagcctgccccgcccccgcccaagaag
aagaacagtgacatgaagggacacctgacatccgatgacatccaggtggttcacctggac
aaggacgaggaaatgcagaagctccctcttcagcctccttactatgacatggcgccctct
gagtcgacccccttcactgataagccggactctgggaggcgtccagaagaggtgttgaac
ccggctgaatacatgagctaccagcgcgtctgcaacatggaccagttccctgagtctcag
cccgctctggcctatccccctgttaccttcttgcctcagcacccttacacgcagcagcca
cccagcgagcctatgtactccaacaccagcttccccgcccccgtccccgcccctggcccc
cgcgctccattcacgttccccaaggagcaatccgtgtga
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