Labrus mixtus (cuckoo wrasse): 132980758
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Entry
132980758 CDS
T10666
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03018
RNA degradation
Brite
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132980758 (ddx6)
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132980758 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
132980758 (ddx6)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132980758 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132980758
NCBI-ProteinID:
XP_060903056
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All DBs
Position
9:complement(25394536..25405937)
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AA seq
490 aa
AA seq
DB search
MSTARTENPVILGLSNQNGQLRGSVKPAGAPGGGGGGGGGGGGGGGPQLQLNQMKGAINN
GNSQPVPTTNAVIKPGDDWKKNLKLPPKDMRMRTSDVTATKGNEFEDYCLKRELLMGIFE
MGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQAMVIVPT
RELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKG
VAKVNQVQMIVLDEADKLLSQDFVVMMEEILGFLAKQRQILLYSATFPLSVQKFMNSHLQ
KPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKK
ISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPK
LGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEY
HSESGEELKP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgccaggacagagaacccagtgattttgggcttgtcaaaccagaacggacag
ctgagaggctcagtgaagcctgcaggagctccaggtggaggtggtggtggtggtggtggt
ggtggtggaggaggaggccctcaactgcagcttaaccagatgaaaggagcaatcaacaat
ggtaactcccagccggtccctacaactaacgctgtcatcaaacctggagatgactggaag
aaaaatttgaaattgcccccaaaagacatgaggatgagaacttcggatgtgactgcaaca
aaaggcaatgagtttgaagattattgcctgaagagggagctgctcatgggaatctttgag
atgggctgggaaaagccatctccaatccaggaggaaagtattcccattgcactgtcaggg
agagatatcctggccagagccaagaatggcacgggaaagagtggagcctacctcattccc
ttacttgaacgcattgacctgaagaaggactgcatacaagcaatggtcatagtgcccacc
agagaactggctctgcaagtcagccaaatatgtatccaggtcagcaaacacatgggcgga
gtgaaggtaatggcaaccacaggtggaaccaacctccgtgatgacatcatgagactcgat
gaaacggtacatgtggtcattgccactcctgggaggattttagacctcatcaagaaagga
gtggctaaagtcaatcaagtgcagatgattgttctggatgaagcagacaaactcctgtct
caggactttgtagtgatgatggaggagatattgggcttcctggccaaacagaggcagatt
ctgctgtattctgcaaccttccctctcagcgtgcagaagtttatgaactcacacttgcag
aaaccatacgagatcaacctgatggaggagctgacactgaagggtgtgactcagtattac
gcttatgtaactgaaaggcaaaaggttcattgccttaacaccttgttctccaggctccag
atcaaccagtccataattttctgcaactcctctcagagagtggagctcctcgccaagaaa
atttcccagcttggttattcatgtttctacattcatgccaagatgagacaggagcaccgc
aaccgcgtattccacgacttcagaaatggcctctgcaggaatctcgtctgcactgatctc
ttcacaagaggcattgacattcaagctgtgaatgtcgtgatcaactttgactttcccaag
ctgggagaaacataccttcatcgcattggtagatccggccgctttggacacttgggtcta
gccatcaacctcatcacttacgacgatcgcttcaacctgaaagggattgaggagcagctc
gggacagagatcaagcccatccctggcatcattgataagagcctctatgtggcagagtac
cacagtgagagtggcgaagaactgaagccatga
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