Labrus mixtus (cuckoo wrasse): 132980773
Help
Entry
132980773 CDS
T10666
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
lmix03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132980773 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Bcr-Abl_Oligo
HAUS-augmin3
PqqD
HTH_32
Fib_alpha
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
132980773
NCBI-ProteinID:
XP_060903081
LinkDB
All DBs
Position
9:25665528..25667830
Genome browser
AA seq
716 aa
AA seq
DB search
MAAFSAERWLEDLPNHAIFKQLRSKLHLEPNLNERGVAKNLTFCLGGDFFVWDDADRVFY
TTNLRQLNSDDNSGSYQTLLCINHPHFEVCQVLLSPTQHHVALVGKQGVSVLELPQRWGK
RSEFEGGRSDVSCKTIPVAERFFTSSAAVSLRQAAWYPSETDEPHLVLLSSDNTIRFYGL
KSPQTPGKVLSLSQSEDDSSGHPPARSFAASLGEIAVAFDFGPLSAPPRQLPGLSSKDQQ
VYPLYILYENGETYLSYTSQTNGAVSVSKPAGPLPMYPAAEDNYGYDACAILCLPCVPSI
LVIATETGTLYHCVVLESEDEEETVEKWIRGAEAVPALYVFECVELELTLKVATGEDEDP
QEFDFTCPIRLHRDPLCQHRYHCTHEAGVHGVGLIWVNKLQKFLQSGEEDKDGLQELAAE
KRCIVEHILCTRPLLTSQSSPVRGFLIVSDLSLGATMICITSSFECILLPLLSSVRPPSP
PLLCSHPGPGSVSSPLRGLADDSFEQHIRNILARSSTNPLVLKAGDKDMSPPPPECLQLL
SRATQVFREEYILKQDMAREEMQRRVKLLTGQKKRQLEDMALCKEDQKSLKEAAERLADK
YEDAKYRQETIMNRVKKVLGSLQSHLPILSNSEKDMRKELQTIGDQLKHLDNSIKQVNMK
MEYQKTQVDKNAPAARTSVSLNAHQKKVVQDVLREQGQQIGDMMKQIKDIKNHVSF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttcagcgcggagcggtggttggaggacttaccaaatcatgcgattttcaaa
caactgcgaagcaagttgcatttggagcccaatttaaacgagaggggggtcgctaaaaac
ctcaccttctgtttgggcggggacttcttcgtgtgggacgacgccgaccgcgttttctac
acgaccaacctgcgccagttgaactcggacgacaacagcggaagctaccagaccttgctg
tgcatcaaccatccgcacttcgaggtgtgccaggtgttgctgagtcccacgcagcaccac
gtggctctcgtcgggaaacagggggtctcggtgctggagcttcctcagcggtggggcaag
aggtcagagttcgagggcggcagaagcgacgtcagctgcaagaccatcccggtggcggag
cggttcttcaccagctccgcggcggtgagtctgcgacaggcggcttggtaccccagcgag
acggacgagccccacctggtgctgctctcatccgacaacaccatcaggttttacgggctg
aagtctccacagacgccgggtaaagttttatctctgtcgcagtcagaagatgacagcagc
ggtcatcctcccgcccggtccttcgcagcttctctgggagagattgctgtcgcttttgac
ttcgggccactttcagctccacctcggcagctgccaggactgtcctccaaagaccagcag
gtgtaccctttgtacatcctctacgaaaacggggagacctacctgagctacaccagccag
acaaacggggcggtgagtgtgagtaaacccgccggacccctccccatgtatcctgctgca
gaggataattacggctatgacgcctgcgccatcctctgcctgccctgcgtccccagcatc
ctggtcattgccacggaaaccggcacgctgtatcactgcgtggtgctggagtcagaagac
gaggaggagaccgtggagaagtggatccgaggagcagaggcggtgccggctctttacgtg
ttcgagtgtgttgagctggagctgaccctcaaagtggccacgggcgaggatgaggacccc
caagagtttgatttcacctgcccgatcagactgcacagagaccccctctgccagcacagg
tatcactgcacgcatgaagcgggagtgcacggagtcgggctaatctgggtcaacaagctg
cagaagttcctccagtccggggaggaggataaggacggcctccaggagctggccgctgag
aagcgctgtatcgtcgagcacattctttgcaccagacccctcctaaccagccagtcgtct
ccggttcgtggctttttgattgtgtctgacctttccctgggtgccactatgatctgcatc
accagcagcttcgagtgcatcttgttgcccctgctgagctctgtgcgccctccctcccct
cccctgctgtgttcccatcccggcccaggctccgtcagctcccctctacgaggactggcc
gacgactccttcgagcagcacatccgcaacatcctggcacgcagctccactaatcctctt
gtgctaaaggctggcgacaaggacatgtcacctcctcctccggagtgtctgcagctcctc
agcagagccacgcaggtcttccgcgaggagtacatcctcaagcaggacatggcccgcgaa
gagatgcagaggagggtaaaacttctgacgggccagaagaaaaggcagctggaagacatg
gcgctgtgcaaggaggaccaaaagagtctgaaagaggcggcagagaggttggcggacaaa
tacgaagacgcaaagtatcgtcaggaaaccatcatgaacagggttaaaaaagtgctgggc
agccttcaaagccacctacccatactgtcaaacagcgagaaggatatgaggaaggagttg
cagaccatcggtgatcaacttaaacacctggacaactccatcaagcaggtgaacatgaag
atggaataccagaagacacaagtggacaagaacgcaccggccgccaggacgtcagtctca
ctgaatgcccaccagaagaaggtggttcaggatgtcctcagagaacagggacagcagatc
ggagacatgatgaaacaaatcaaagacataaaaaaccacgtcagtttctga
DBGET
integrated database retrieval system