Labrus mixtus (cuckoo wrasse): 132980851
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Entry
132980851 CDS
T10666
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lmix Labrus mixtus (cuckoo wrasse)
Pathway
lmix03022
Basal transcription factors
lmix03420
Nucleotide excision repair
Brite
Enzymes [BR:
lmix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132980851 (ercc2)
Transcription machinery [BR:
lmix03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132980851 (ercc2)
Chromosome and associated proteins [BR:
lmix03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132980851 (ercc2)
DNA repair and recombination proteins [BR:
lmix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132980851 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132980851
NCBI-ProteinID:
XP_060903185
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Position
9:complement(27231339..27244100)
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AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
KMFPLEVTKLIYCSRTVPEIEKVVEELRKLMEFYSKQTGESNNFLALALSSRKNLCIHPE
VSALRFGKEVDGKCHSLTASYIRAQRHTNPDQPVCRFYEEFDAVGRQVPLPAGIYNLDDL
KDFGRRKGWCPYYMARYAILHANIVVYSYHYLLDPKIADMVSKELSKKSVVVFDEAHNID
NVCIDAMSVNITRRTLDRCQTNVDTLQTTIQKIKETDSAKLKEEYRRLVEGLKEANVARE
TDVYLANPVLPDEILKEAVPGTIRTAEHFVGFLRRFLEYLKSRLRVQHVVQESAPQFLKD
IFEKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISSFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPKILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAIVPDGIVAFFT
SYVYMENIVASWYEQGILENIQRNKLIFIETPDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHINDGSLNLTVDETVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLESEEMLQKISQIAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatagatggtctgttggtctactttccatatgattacatttatccggag
cagtactcctacatgttggagctgaagaggactctggatgctaagggtcatggagtcctg
gagatgccatcaggaacagggaagaccatctctctgctgtctctcatcgtagcttatcaa
aagatgtttcccctggaggtgacaaagctgatctactgctcgagaacggtccccgagatt
gagaaggtcgtggaggagctgaggaagttgatggagttttattccaagcaaactggagag
agcaacaacttcctggctctggcgctctcctccaggaaaaacctctgcatccaccccgag
gtgagcgctctgcgcttcggtaaggaggttgatgggaagtgccacagtctgacagcatcg
tacattcgagcgcagcgccacaccaaccctgaccagcctgtgtgtcgcttctacgaggag
tttgatgctgtgggccgacaggttcctcttcccgctggcatctacaacctggacgacctg
aaggactttggcaggaggaaaggctggtgtccgtactacatggcccgttacgcaatcctg
cacgctaacatcgtggtgtacagctatcactacctgctggaccctaagatcgccgacatg
gtgtccaaagagctgtccaagaagtcagtggtggtcttcgacgaggctcacaacatagac
aatgtgtgcatcgacgccatgagtgtgaacatcaccagacgcacactcgaccgctgccag
accaacgtggacacgcttcagaccaccatacaaaagataaaagagacagactctgctaaa
ctgaaggaggagtacaggcggttggtggaggggctgaaggaagcaaatgttgccagggaa
acagacgtctacctcgcgaaccccgtgttaccggatgaaattctcaaagaggccgtcccc
ggcacgatccgtacagcggagcactttgtcgggttcctgaggcgtttcctggagtacctg
aagtcccgcctgagggtccagcatgtggtgcaggagagcgccccgcagttcctcaaagac
atttttgagaaagtctgcatcgaccgcaaaccgctaaggttctgtgcggagcgattacag
tcgttactacgaactctggagatcgcagacatagcagacttctcagctgttactctcatc
tccagctttgcaactctggtcagcacctacagccaaggttttaccatcatcatcgagcct
tttgaagacagaactccgaccatcgccaaccccgtgctgcacttcagctgcatggatccg
tctatagccatcaaacctgtttttcaaaggtttcagtcagttgtcataacctcggggact
ctctctccgctcgacatctatcccaaaatcctcgacttccgcccggttaccatggcgtcc
ttcaccatgacgctggcccggacctgcctctgtcctctgattgtcggcagaggaaacgat
caggtggcactcagctcaaagtttgagaccagagaagactttgctgtgatccgtaactac
ggcaaccttctcctcgagatgtctgcaatcgttcccgatggcatcgttgcgtttttcacc
agctacgtgtacatggagaacatcgtggcgtcttggtatgagcagggtatcttggagaat
attcagagaaacaagctgatcttcattgagactccagacgctgcagagaccagcatggcc
ctggagaaataccaggaggcgtgtgagaacggcagaggagccatcctcctgtcggtggcc
aggggaaaagtctccgaaggaatagattttgttcatcactttggccgagcagtcatcatg
tttggagtgccttatgtttacacccagagccgcatcctaaaggctcgtctggagtacctt
cgggatcagtttcagatcagagaaaatgacttcctgacgtttgatgccatgcggcacgct
gcccagtgcgttggcagagccatcagaggcaagaccgactatggactcatgatttttgct
gacaagcgttatgcgcgagcggacaaacgggggaagcttcctcgctggatccaggagcac
atcaatgacggcagtctgaacctcaccgtggacgaaaccgtccagctctccaagcacttc
ctgcgccagatggctcagcctttcagacaggaggaccagttgggtctgtctctgctgact
ctcgagcagctggagtcggaggagatgctgcagaaaatctctcagattgctcatcagacc
tga
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